Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00945 ACTCAATAAGAAACAAAAAAACGGACTGAGACGGGGGAGAAGAACTAGGCAGCCTTGTACGGAACTCGTAATTTGGGATTGAATTTTTGCAACGAAGGAAGGGAACAATGGACATCAGACTCCCATGGAATGGAATGGATGATGATTCTTCCATTACTTTCTAGACCGACAAACCAGCTGAAGAAGAAGATTTTCCTTCTCAATCTATAACCCCATCTCCTTCAATCAATTCCGACTTTCTCCCACCCACTCTCCTTCTCGCCGCCGGCGCCGATCATGTCTTCCCCATCCTTCCCTCCTTCCATGGACCCTCCCGCCCAACAGATCCCTCTCTTACCCTCTCGTCAGCCCTCCAACTCTGACGGCTCCACTTCCCCCATCGGCCCCCTCGCCCTTCTCTTGGGTCGCGCCACTGGCCGCCGTGGAACTTCTATGCTGGTTCGGGAGACGGCAGCTCGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTATTCTAAGCCTGTGGTAGCCCTTGACATTATGTGGAATTTAACTTTCGTTTTCGTTTCGCTGGGTGTGCTTATTCACTCCGCTGATGAAAAACCCAATACGCCAATTCGCCTTTGGATTGTAGTTTATGCGGCTCAGTGCTTGCTGCACACCGTGCTTGTGTGGTTTGAGTTCAGAAGGAGAAATGCGAGGAGGGCTAGGGATATGGAGACGCAGCAACAGCAGCAGCCTGACGGATATGTAACTAATGAAAGCGATGATGAAGATGGTAGCCACAGGAATCTGTCCGGATGTGAGTCAGTGAACACTCTGGTATCGTTAATTTGGTGGTTGTTTGGCTTTTACTGGGTCGTGGCTGGTGGTAACATCCTCATGCAGAATGCTCCATCTTTATACTGGCTCGCTGTCGTATTCCTGGCATTTGATGTGTTCTTTGCCGTCTTTTGTGTTGTTTTGGCATGTTTTATTGGAATTGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGAAGGTGCAACAGATGCTGATTTAAGTTTGCTTCCTAAGTATAGATATCAAGTGTCCAATGAGCCTTCTCCGGGGGATGGGTTGATGATTCCAGTAGAGACTAGCAGTAGATACTTGACGACTGAGCGTGTTCTATTACGCGAGGATGCGGAGTGCTGTATATGTCTTAGTCAATACGAGGACGGAGCCGAGCTTCATGCTCTTCCCTGCAATCACCATTTTCATTATGCGTGTATCACAAAATGGCTGAAGATGAATGCAACATGTCCTCTGTGCAAGTACAACATTCTAAAAAATAGTGAACCCGTGTAATGCTGAAGATGAAACGATGCAGTGAGTTCCTGGTATGTTTGCCGTCCTTGTACATATAAATCAGATAGTGATCCTGCTGCATTGTGGTTGAAACATGTTACACTTTTTTTTTTCTTTTTGTCTTTTTTGATGGGGGGGAGTAATTAGTTCTCTAGGCCGTTGAAATTGTGTTCATGCTGGTCGATATCTGTTGTACTTAATCAGTCGACTCGTTTGATCTGTAGCAACAATTATGAATGTCTTTCCGGTCAATGTGCTCAGAATAACATTTATTATTCAACTTCTACCA 1621 46.27 MSSPSFPPSMDPPAQQIPLLPSRQPSNSDGSTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRIDWGYSKPVVALDIMWNLTFVFVSLGVLIHSADEKPNTPIRLWIVVYAAQCLLHTVLVWFEFRRRNARRARDMETQQQQQPDGYVTNESDDEDGSHRNLSGCESVNTLVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAFDVFFAVFCVVLACFIGIALCCCLPCIIAILYAVAGQEGATDADLSLLPKYRYQVSNEPSPGDGLMIPVETSSRYLTTERVLLREDAECCICLSQYEDGAELHALPCNHHFHYACITKWLKMNATCPLCKYNILKNSEPV 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28521866 28532029 - XM_039018824.1 Bhi12g00945 52757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00945 351 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE 15 348 - -
Bhi12g00945 351 MobiDBLite consensus disorder prediction 1 19 - -
Bhi12g00945 351 MobiDBLite consensus disorder prediction 138 165 - -
Bhi12g00945 351 CDD RING-H2_RNF111_like 299 343 - -
Bhi12g00945 351 Pfam Ring finger domain 299 341 IPR001841 -
Bhi12g00945 351 SUPERFAMILY RING/U-box 286 346 - -
Bhi12g00945 351 MobiDBLite consensus disorder prediction 1 32 - -
Bhi12g00945 351 ProSiteProfiles Zinc finger RING-type profile. 300 341 IPR001841 -
Bhi12g00945 351 SMART ring_2 300 340 IPR001841 -
Bhi12g00945 351 PANTHER TARGET OF ERK KINASE MPK-1 15 348 - -
Bhi12g00945 351 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 349 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00945 Bhi-Chr12:28521866 Bhi12g00947 Bhi-Chr12:28522202 0 dispersed
Bhi12g00944 Bhi-Chr12:28521866 Bhi12g00945 Bhi-Chr12:28521866 0 tandem
Bhi12g00945 Bhi-Chr12:28521866 Bhi12g00946 Bhi-Chr12:28521866 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00945 - K13148 cmo:103504433 613.609