Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00964 GAATGAAGTGTTGGGGAGCATGTGTGAGCAGAGGGCAAGGATGTTGCAGGATCAATTCAGTGTTAGTGTTAACCATGTTCATGCGTTGGCTGTCCTTGTTTCCACCTTTCATTACTTCAAAAACCCTTCTGCTATTGATCAGAATACACAGCCAGAACTGCTTTTGAACGGCCTCTACTCAGTGGTGTGGCGTATGCACAAAGAGTGATTCATTCAGAGAGGGATATCTTCGAAAAGCAACACGGGTGGATGATAAAAACAATGAAAAGAGAACCCTCGCCAATTCGAGATGAATATGCACCAGTAATATTTTCTCAAGAAACAGTCTCTTATATTGAATCACTGGATATGATGTCAGGAGAGGAGGACCGTGAAAATATTTTGAGGGCTAGAGCAACAGGAAAGGCTGTTTTAACAAGCCCCTTCAGGCTGCTGGGTTCTCATCATCTTGGAGTTGTTTTGACATTTCCCGTTTACAAATCCAAATTGCCATCTAAACCAACTGAAGAAGATCGGGTTGAAGCAACAGCAGGCTACGTTGGCGGAGCCTTTGATGTTGAGTCCCTCGTGGAGAACTTGCTTGGGCAGCTTGCAGGGAATCAGGCCATTTTAGTAAATGTATATGATGTCACAAACTCTTCTGATCCCCTCGTCATGTATGGTCATCAATATCAAGATGGTGACTTGTCTCTTTTGCATGAGAGTAGCCTTGATTTTGGAGATCCATTCAGGAAGCATTTGATGATTTGTAGATATCAGCAGAGGGCTCCCACATCCTGGACTGCCCTTACTACTGCATTCTTATTCTTCGTGATCGGGTTGTTAGTCGGATATATTTTGTATGGTGCAGCAACTCACATTGTGAAGGTTGAAGATGATTTTCATGAGATGCAAGTACTGAAAGTTCGGGCAGAGGCTGCTGATGTAGCAAAATCCCAGTTTCTTGCTACTGTTTCTCATGAAATTAGGACACCAATGAATGGCATCCTCGGAATGCTTGCTCTGCTTCTGGATACAGATTTAAGTTCTACTCAGAAGGATTATGCTCAAACTGCTCAGGCTTGTGGAAAGGCACTGATAGCATTAATAAATGAGGTTCTTGACCGGGCAAAAATTGAAGCTGGAAAGTTAGAACTGGAAGCAGTTCCATTCGACATTCGATCAATACTCGATGATGTGCTATCTTTATTTTCCGAGAAGTCCAGACAAAAGGGCCTGGAGCTGGCAGTTTTTGTTTCTGATAAAGTTCCAGAAATTGTTATTGGGGATCCTGGAAGATTCAGACAAATTATAACCAATCTTGTGGGTAACTCTGTTAAGTTCACTGAAAGGGGACATATATTTGTTAAAGTGCACCTAGCTGAGCACTCAAAAGGCTCCATTGACTCAAAATATGTCAATGGAATGTCTGACAGTGACTTATTCATATCGGGTGGTCGTGAATTTCAAACTTTGAGCGGATATGAGGCAGCTGATGATCAGAACAGCTGGGATAACTTTAAACATCTAATTGCTGATGAGAACTTCCAGTTGAATGCCACTCCAAACAACATGGTAGTTACCAACGAGGGTTGTGGTCATGTTACTTTGATGGTAAGCGTGGAGGATACTGGAATTGGGATCCTCTTACATGCCCAAAATCGAGTTTTCATGCCCTTCATGCAAGCAGATAGCTCAACCTCCCGAAATTATGGGGGGACTGGTATTGGCTTGAGTATCAGCAAATGTTTAGTTGAACTAATGGGTGGTCAGATCAACTTCATAAGCCGGCCTCAGATTGGAAGCACGTTTTCCTTCACTGCTGTTTTAGGAAAATGTAAGAAAAACTCAATCAATGATATGAAAAAACCCAACTCTGAAGAACTTCCCCCCAGTTTTAGAGGAATGAAAGCAATAATAGTTGACAGGAAACATGTTAGAGCTTCTGTAACCAGATATCATTTGAAGAGACTTGGTATTATAGTTGAAGTCACCAGTAGCATCAACATGGCAGCTTCTTTATGCAGAGAAAATGGATCCACAGTACCAGGAAACGCAATTCTTCCAGACATGATCTTAGTTGAAAAAGATACATTAAAGTCCGATGAGGAATGTGGGATCATTCATCAACTGAGCTGGAAACTGAATGGGAGTTCGTTTAAGTTACCGAAGCTGATCCTTCTTGCTACAAATATTACCACTGCAGAGCTAGACAAGGCAAGAGCAGCAGGGTTTGCAGACACTGTGATCATGAAACCATTGAGGGCGAGTATGGTGGCTGCCTGTCTTCAACAAGTACTCGGGGTTAAGAATCAGAGACGGGGAAGGGGCCTACCAAATGGTTCTGCTTTCCTCCAGAGCCTTCTCTGTGGCAAGAGAATCTTGATTGTTGATGACAACAGAGTAAACCGTAGGGTCGCTGCAGGCGCTCTGAAGAAATTTGGTGCAGATGTTGAGTGTGCAGACAGCGGGAAAGCTGCCCTGAAGTTGCTTCAGCTACCACACAATTTCGATGCTTGCTTCATGGATATTCAAATGCCTGAAATGGATGGGTTTGAGGCGACTCGTCTAATCAGGATGATGGAGAACAAGGCAAACAAAGGAGGATCATCTGCAGTGGAAGGCAAGTGGCATATGCCGATATTAGCAATGACTGCAGACGTGATTCATGCTACGTATGACGAATGCCTGAAATGTGGAATGGACGGCTACGTCTCGAAACCCTTTGAGGAAGAAAATCTATACAAGGAAGTTGCTAAGTTTTTCAAAAAATCATAGTCCATCAAAGGCTTCATGAATGACTGCTGAAAAGAAGCAGAGGCAAAATCTCCATTGCAGATCATCTTTTGGTAGGTTGGAAGTACCAGCAAGTTTTGACACCATTGCTGGTGCTAACTGTCTTCTTGCTTGAACGAGAGCGTCGGGAATTCTTGACTGGAATTGAGATTCAGGTTTAAGCTGTTGGCGTATCTGACCAACGAAGTATTTATTTTGTTTAGAATGTGAGTACCTACCTGTATACTACAACAGAAATATCCATCCCCAAATGGATGTATAAAGGGTTGTAAGGGGAAGGAACTAAATTGTAAATTCTCCTATTTTAAGACTTCTAAATATCTTGATAGTTGGTTGAATTAGGCTGTCATTTTGGCTAAATATTTACATCAAGCTAATATGTTATGATGTTGGAAGAATTTTAATTCTTATTAGAGAACAAACAAATTCACAAA 3209 42.07 MIKTMKREPSPIRDEYAPVIFSQETVSYIESLDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPSKPTEEDRVEATAGYVGGAFDVESLVENLLGQLAGNQAILVNVYDVTNSSDPLVMYGHQYQDGDLSLLHESSLDFGDPFRKHLMICRYQQRAPTSWTALTTAFLFFVIGLLVGYILYGAATHIVKVEDDFHEMQVLKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQKDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDIRSILDDVLSLFSEKSRQKGLELAVFVSDKVPEIVIGDPGRFRQIITNLVGNSVKFTERGHIFVKVHLAEHSKGSIDSKYVNGMSDSDLFISGGREFQTLSGYEAADDQNSWDNFKHLIADENFQLNATPNNMVVTNEGCGHVTLMVSVEDTGIGILLHAQNRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISRPQIGSTFSFTAVLGKCKKNSINDMKKPNSEELPPSFRGMKAIIVDRKHVRASVTRYHLKRLGIIVEVTSSINMAASLCRENGSTVPGNAILPDMILVEKDTLKSDEECGIIHQLSWKLNGSSFKLPKLILLATNITTAELDKARAAGFADTVIMKPLRASMVAACLQQVLGVKNQRRGRGLPNGSAFLQSLLCGKRILIVDDNRVNRRVAAGALKKFGADVECADSGKAALKLLQLPHNFDACFMDIQMPEMDGFEATRLIRMMENKANKGGSSAVEGKWHMPILAMTADVIHATYDECLKCGMDGYVSKPFEEENLYKEVAKFFKKS 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 29341121 29347683 - XM_039018692.1 Bhi12g00964 52776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00964 835 Gene3D - 697 835 - -
Bhi12g00964 835 Pfam Response regulator receiver domain 704 828 IPR001789 GO:0000160
Bhi12g00964 835 SMART CHASE_2 7 139 IPR006189 -
Bhi12g00964 835 Pfam His Kinase A (phospho-acceptor) domain 227 292 IPR003661 GO:0000155|GO:0007165
Bhi12g00964 835 ProSiteProfiles Histidine kinase domain profile. 234 522 IPR005467 -
Bhi12g00964 835 SMART HKATPase_4 339 522 IPR003594 -
Bhi12g00964 835 SMART REC_2 702 828 IPR001789 GO:0000160
Bhi12g00964 835 Pfam CHASE domain 10 137 IPR006189 -
Bhi12g00964 835 CDD HATPase_EvgS-ArcB-TorS-like 344 520 - -
Bhi12g00964 835 Gene3D CHASE domain 1 173 IPR042240 -
Bhi12g00964 835 ProSiteProfiles CHASE domain profile. 1 166 IPR006189 -
Bhi12g00964 835 SUPERFAMILY CheY-like 701 831 IPR011006 -
Bhi12g00964 835 Gene3D - 200 290 - -
Bhi12g00964 835 CDD HisKA 227 288 IPR003661 GO:0000155|GO:0007165
Bhi12g00964 835 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 520 IPR003594 -
Bhi12g00964 835 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 281 517 IPR036890 -
Bhi12g00964 835 CDD REC_hyHK_CKI1_RcsC-like 704 828 - -
Bhi12g00964 835 PANTHER HISTIDINE KINASE 4 1 834 - -
Bhi12g00964 835 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 214 293 IPR036097 GO:0000155|GO:0007165
Bhi12g00964 835 ProSiteProfiles Response regulatory domain profile. 547 677 IPR001789 GO:0000160
Bhi12g00964 835 SUPERFAMILY CheY-like 542 679 IPR011006 -
Bhi12g00964 835 ProSiteProfiles Response regulatory domain profile. 703 832 IPR001789 GO:0000160
Bhi12g00964 835 Gene3D - 291 525 IPR036890 -
Bhi12g00964 835 SMART HisKA_10 227 292 IPR003661 GO:0000155|GO:0007165
Bhi12g00964 835 Coils Coil 277 297 - -
Bhi12g00964 835 PRINTS Bacterial sensor protein C-terminal signature 447 461 IPR004358 GO:0016310|GO:0016772
Bhi12g00964 835 PRINTS Bacterial sensor protein C-terminal signature 465 475 IPR004358 GO:0016310|GO:0016772
Bhi12g00964 835 PRINTS Bacterial sensor protein C-terminal signature 482 500 IPR004358 GO:0016310|GO:0016772
Bhi12g00964 835 PRINTS Bacterial sensor protein C-terminal signature 506 519 IPR004358 GO:0016310|GO:0016772
Bhi12g00964 835 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 834 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00964 Bhi-Chr12:29341121 Bhi12g00966 Bhi-Chr12:29341121 0 dispersed
Bhi12g00964 Bhi-Chr12:29341121 Bhi12g00965 Bhi-Chr12:29341121 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2628 PF02518 HATPase_c 1.50E-31 CL0025 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00964 K14489 - csv:101209777 1574.68