Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00981 GTCCAACTAACAGTAAAGTATTATTAAAAAAACCAAAAACCAAACCAATGTGCAAGTGATATACTATTTACTATATATATATATTTGTAGAAAGAAAAGAAAAGAAAAGAAAAGAAGAAAAGGGGCCCTTACATTAGAAGCTAATGTCATCTGCGTGGTCAGGCAGCCCCATCCTCCCAATTATCTCCTCCTTTTATATTCATCTTTTTTCACTCCCAATATCCCACCATTACCATACACAAAAAAGAAACCCTTCACATAAATTTTCCTTTTTCATTATTATTCTTCATTTCATCATAATCATGTTGAAGAAATCTTCTTCTTCTTCTTCTAGTGGCCTTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCCAATTCTGACCAATATGCCATCACCAGCAAAAGAAAAAGAAGACCCGCAGGCACTCCAGATCCGGATGCGGAAGTGGTTTCTTTATCTCCAAAAACGCTTCTTGAATCGGATCGGTATGTATGTGAGATATGCAATCAAGGGTTTCAAAGGGATCAGAATCTTCAGATGCACCGGCGGCGTCACAAAGTGCCTTGGAAGTTGCTGAAGAGGGCGGAGACGACGGGGGAGAGTGTGAAAAAAAAGGTGTTTGTTTGTCCGGAGCCGACGTGTCTCCACCATGATCCTTGTCATGCGCTTGGTGATCTAGTGGGTATAAAAAAGCACTTCCGGAGAAAACACAGCAACCAAAAACAGTGGGTTTGTGATAAGTGCTCTAAGGCTTATGCTGTTCATTCTGATTTCAAAGCTCACCTCAAAACTTGTGGCACTCGTGGCCACTCTTGTGATTGTGGTCGTGTCTTTTCCAGAGTGGAGAGTTTCATAGAGCACCAAGACAATTGCAATCTCCGCCAGATGGGGTCCGATCAGTTGCAGCCGGTGGCACGGTCGCCACCACCGCCGCCACTGTTATTGCAACCCTATAGCTCACGATCAGTTTCTTACACCGGCGCCTCCACCAGCAAAGATCATAGCTTTCAAATGGCTACTCCATTACGAGGGTTTCCAATCTTATCATCAAACTCAGATCGAAACATCAACATTAATTTACCCGATCACCACGATCTCGAGCTTCATCTCTCTTCTCCAAGCTCAGCTTTTCTAAAGCTTTCAATTGGGTCTAACAAAGAACCGAACGACGAGCGTCAGCTCGAGCTAGCAATAGCGGAGAAGGCATATGCAGATGAAGCAAGACGAGAGGCGAAACGACAAATTGAAATCGCTGAGGTCGAGTTTGCAAATGCCAAAATGATACGGCAGCAAGCTCAAGCCGAGTTGGAGAAAGCAAGGATCTTGAAGGAAGAAGCAAGCCGGAAAATGAGCTCCACCATTATGGAAATCACTTGCCAAACTTGCCGGTTGCATTTTCACATGAGCTCTGTCGTGCCCGAGGAAACCTCACTCGCCATCAGTTACATGTCATCTGCCACGACAGAGGGTGATGGCGAGTGAAGTATATTTAAAGAGTCTAGAACAATGTGATTAAGAATATGTCGACCTTGTTGAGATATTCGGGTGCATACTAACCTACCTCGTATCTTCTTTTAAAAACATCTAACAATTTTTTTAAAAAAAAGTAATTTGATCGAAAGTTTTAGAAGAAGTCGCCCTAATATCCGTTTGATCAAAAAATTTCTACATCTAACAGTGTAGAATGATCAACAACTATATTGTTCTAGTCTCTTTAAACAATATCACCAAAATCATATGATTTTTCAAGACGACACAACTTTTAGGGTTATTAATTTTTGAAGATATCGTCTCGTAAAATACGACACAAAATTCAACAATTGAATCAAGATATGGAGGTACATTGGATTAAAATTGTGTAGGGTTTGGTAATTTTGTTGTTTGTGTGTATTTGTATTTTTTTTCCCTCTTCTTTCTTTTTAGACTCATGATTTTGTTGAATTATTGTATATGTGATGATTATTGCAGTGTCTCGAGGGGCGAAAAACTTGAGGTGTTAGGTTTTAATAATTTATGTTGGTTTTTAGCTGCAAAGAAAAATCCATTGTTTGAATTCTTCAAAAGTACAATAATAATATAAAAGAATCACTCATTATTGT 2110 40.28 MSSAWSGSPILPIISSFYIHLFSLPISHHYHTQKRNPSHKFSFFIIILHFIIIMLKKSSSSSSSGLPLPPPPPPPPPPPSNSDQYAITSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRAETTGESVKKKVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNQKQWVCDKCSKAYAVHSDFKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCNLRQMGSDQLQPVARSPPPPPLLLQPYSSRSVSYTGASTSKDHSFQMATPLRGFPILSSNSDRNININLPDHHDLELHLSSPSSAFLKLSIGSNKEPNDERQLELAIAEKAYADEARREAKRQIEIAEVEFANAKMIRQQAQAELEKARILKEEASRKMSSTIMEITCQTCRLHFHMSSVVPEETSLAISYMSSATTEGDGE 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 29828061 29830637 + XM_039019415.1 Bhi12g00981 52793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00981 449 Gene3D Classic Zinc Finger 97 166 - -
Bhi12g00981 449 PANTHER OS03G0310200 PROTEIN 82 332 IPR039288 GO:0009630
Bhi12g00981 449 PANTHER OS03G0310200 PROTEIN 346 449 IPR039288 GO:0009630
Bhi12g00981 449 SUPERFAMILY Formin homology 2 domain (FH2 domain) 69 168 - -
Bhi12g00981 449 MobiDBLite consensus disorder prediction 62 105 - -
Bhi12g00981 449 Gene3D Classic Zinc Finger 184 260 - -
Bhi12g00981 449 SUPERFAMILY beta-beta-alpha zinc fingers 118 219 IPR036236 -
Bhi12g00981 449 ProSiteProfiles Zinc finger C2H2 type domain profile. 119 141 IPR013087 -
Bhi12g00981 449 PANTHER ZINC FINGER PROTEIN SHOOT GRAVITROPISM 5 346 449 - -
Bhi12g00981 449 PANTHER ZINC FINGER PROTEIN SHOOT GRAVITROPISM 5 82 332 - -
Bhi12g00981 449 SMART c2h2final6 199 226 IPR013087 -
Bhi12g00981 449 SMART c2h2final6 119 141 IPR013087 -
Bhi12g00981 449 SMART c2h2final6 163 193 IPR013087 -
Bhi12g00981 449 MobiDBLite consensus disorder prediction 65 82 - -
Bhi12g00981 449 ProSitePatterns Zinc finger C2H2 type domain signature. 121 141 IPR013087 -
Bhi12g00981 449 Coils Coil 364 405 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01969 Bhi-Chr8:56800257 Bhi12g00981 Bhi-Chr12:29828061 4.47E-144 dispersed
Bhi12g00981 Bhi-Chr12:29828061 Bhi03g01276 Bhi-Chr3:26369233 1.01E-73 dispersed
Bhi12g00981 Bhi-Chr12:29828061 Bhi11g02110 Bhi-Chr11:59738075 3.03E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2636 None None None None Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00981 K25871 - csv:101210468 688.337