Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00996 TCATCTTTCTCCACCAAATTACTAAACCAAATTCCAATACAATCTATTCTATTCTCTACACCTCCTTCACTTTCAATTCCATCACCAAAATGGTGTTGTCCAAAACTTTCTCTGAATCCGATGTTTCCATACATTCCACATTTGCCTCTCGCTACGTTCGAGACTCTGCTCCAAGGTTCACCATGCCCGACAACTCCATGCCCAAGGAGGCCGCCTTCCAAATCATCAACGACGAACTCATGCTCGACGGCAACCCAAGGCTCAATTTAGCCTCCTTCGTCACTACCTGGATGGAGCCCGAATGCGATAAGCTCATCATGGACTCTGTCAACAAGAACTACGTCGACATGGACGAATACCCTGTCACCACCGAGCTTCAGAACCGCTGCGTCAACATGATTGCCCATCTCTTCAACGCTCCCTTGGGAGACTCCGACACCGCCGTCGGCGTTGGAACGGTGGGGTCGTCGGAGGCCATCATGCTGGCAGGGCTTGCCTTCAAGAGGAAGTGGCAGAACAAGAGGAAGGCGGAGGGGAAGCCTTATGACAAACCCAATATTGTGACGGGTGCGAATGTGCAAGTTTGCTGGGAGAAATTTGCGAGATACTTTGAAGTGGAGCTGAAGGAAGTTAAAGTGAGAGAAGGGTATTACGTGATGGACCCTGTCCAGGCAGTCGAGATGGTGGATGAGAACACCATTTGTGTTGCTGCAATTTTGGGGTCAACTTATAATGGAGAATTCGAAGATGTGAAGCTGCTGAATGATTTGTTGGTGGAGAAGAACAAGGAAAGTGGATGGGATACGCCAATTCATGTGGATGCAGCCAGTGGTGGGTTCATAGCACCGTTTTTGTATCCAGAGCTCGAATGGGATTTCAGGCTTCCTTTGGTGAAGAGCATCAATGTGAGTGGGCATAAGTATGGGCTTGTTTACGCTGGGATTGGTTGGGTGATCTGGAGAACCAAAGAAGATTTGCCCGAAGAACTCATTTTCCACATCAATTACCTTGGAGCAGATCAACCCACCTTCACTCTCAACTTCTCCAAAGGGTCAAGCCAAATCATTGCTCAATATTATCAACTAATCCGGTTGGGTTTCGAGGGTTACCGGAATGTGATGCAAAATTGTCACGACAATGCAATGGTGCTGAAGGAAGGGCTTGAAAACACAGGGAGGTTCACGATAGTGTCAAAGGACATGGGAGTGCCGGTGGTGGCGTTTTCCCTCAAAGACCGAAGCCGGCACGACGAGTTTGAGGTTTCAGAGATGTTGCGGAGGTTCGGGTGGATTGTTCCGGCGTATCCAATGCCAGAGGGGGCGAAGCACGTGTCAGTTCTTCGAGTGGTGATTAGAGAAGATTTCTCTCGGACGCTTGCAGAGCGGCTTGTGCTTGATATCGTAAAGGTATTGGCAGAGTTAGATACTCTTCCGCCCAAAAATGGTGGAAATGAAACAGGTTTGAAGAAGACGGTAGAGGAAACAGAGAGGGAAATAGCGACATATTGGAGGAATATAACAAAGGCTAGGACAATCAAGCTTGCTGCTAATCAGACTGGTCCTTCGGTTACAGTGGTTGCCAAATAAGAAGATCATACCATGGGACGTTTGATGGTATTAAATCAATACTAGTTTTAAGTTTTAAGTTTGAAGCACTAAGTATAAGAAAATAAATTTCTTTTATTATTATTGTTATTATTTTACTTTTTAAAAAGTTTTGATTGAATTTGAAGTTGTATTGTATTGTAGCTAATGTGTCACTATACCTGCCTTGACTTGACTACATTTGTGTAATGAGTTTTAAAATTGAAAAATAAAATAACACTTCATTCGTTCA 1836 45.1 MVLSKTFSESDVSIHSTFASRYVRDSAPRFTMPDNSMPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSDTAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKVREGYYVMDPVQAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLVEKNKESGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYRNVMQNCHDNAMVLKEGLENTGRFTIVSKDMGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNGGNETGLKKTVEETEREIATYWRNITKARTIKLAANQTGPSVTVVAK 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 30431809 30433719 - XM_039050528.1 Bhi12g00996 52808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00996 498 PANTHER GLUTAMATE DECARBOXYLASE 1 481 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bhi12g00996 498 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bhi12g00996 498 SUPERFAMILY PLP-dependent transferases 16 444 IPR015424 -
Bhi12g00996 498 CDD DOPA_deC_like 59 439 - -
Bhi12g00996 498 Gene3D - 66 360 IPR015421 GO:0003824
Bhi12g00996 498 Gene3D - 361 448 - -
Bhi12g00996 498 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bhi12g00996 498 Gene3D - 1 65 - -
Bhi12g00996 498 PANTHER GLUTAMATE DECARBOXYLASE 1 481 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01787 Bhi-Chr4:43257941 Bhi12g00996 Bhi-Chr12:30431809 3.20E-07 dispersed
Bhi04g01788 Bhi-Chr4:43257941 Bhi12g00996 Bhi-Chr12:30431809 2.44E-08 dispersed
Bhi12g00996 Bhi-Chr12:30431809 Bhi12g01215 Bhi-Chr12:36198120 0 dispersed
Bhi12g00996 Bhi-Chr12:30431809 Bhi12g00997 Bhi-Chr12:30509874 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00996 K01580 - csv:101208026 969.148