Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01088 TCACTCACATCATATCCATTTCATATACCAACATGAAACTACGTTGACTCAAACGAAAACGGATGAATTTTTTTTCGCAATTCATCAGACCCTTTTTTCTTTTCTCCTCAAATCAATTCAATTTTGTTGCAAACCGACCCAAATTTTTTAGCAATGAAAGAAAATCACATTCTGATAATAACGGTTTCTCTCTGATTTCCGATTTTTCTCTGCATTTCTTCCACCTAATTTCGTTGAAGATGGATACGTTTTGCGGTTTTCGATAATTCTTCGAAAATTTTTCGTCTATCAATGGATTCCTAGCCTTTTCTATGCGCCATCATCTGCAGATTTTCCTTTAAATTCATTAAACTATCGCCTCCTCCCTCTTTTAATCTCTTGTTGTACGATTAAGACCAAGTTCAATGAGTGGAAGAGTTAAGAAAATGGCTGTTTTCAGGTTGCCCCATTCTTTCATGATTTGTGTACACATTATTTGAAGCTGGACATGTCAACCCAGCAGCAAAATTCTGATTCAAATGGCGTTTCAGGCGCTTGTCTCTTTGAACTCCTGTTTCCAGATTCAGAAATGCAAGGCTGGGACTGGAGTCGGATGCCCTCTGATTCAGAAACGCAACGCTGGAATTGGAAGAAGGACCAACAGCTCTCTGGCCCCCAGAAAAGGTTGGAAGATCTGTTGCGGCAATCTGGTAATAAGTATTGTGCAGATTGCGGATCACCGGATCCAAAATGGGTATCGTTAAATTTGGGAGTGTTTATCTGTATAAAGTGTTCTGGAGTACACAGAAGTCTTGGAGTTCATATCTCTAAGGTTTTCTCAGTGAAACTAGATAATTGGACGGATGAACAAGTTAATACTTTGATAAGCATGGGCGGAAACGCAGATGTAAACAAGAAATATGAAGCTGGCATCATCGATGTGAACCGAAAACCGAAACCAGATTCTTGTATAGAGGAGCGCTTCGAGTTTATAAGGAGAAAGTATGAACTGCTGCAATTTTATAACGCCAATAGTAGTCAAAATTCTAGTGATAACAACTCATTTAGTAAAAGAAGTTCATCATGCCCCCAAAGTAGTAACTCTTCAAGCAAGCATGGTAGCCACGACAAAAGACACTTCGAGAAGCAAGCTACTAGGCATCGCATCGGGCACGCATTTCGTAACAGCCGGGTAAGAAGAGATAGTGAGCACAAGAATTCTGACAAGAACAGCCCTGCAGTCTCAAGACAAGCATCGGCAGGTATGGTTGAATTTGTTGGCTTGGTTAAGGTCAATGTGGTTAGAGGCACAAACCTAGCTGTTCGAGACGTGGTGACCAGCGATCCCTATGTAATTCTCACGTTAGGCCATCAATCGGTGAGGACTCGCGTCATAAAGAACAACCTAAACCCAGTTTGGAATGAGAGCCTAATGTTGTCGATTCCTGAGCATATCCCTCCGCTGAAAGTGCTTGTCTATGATAAGGACACATTTTCAACTGATGATTTTATGGGTGAAGCCGAAATCGACATTCAACCGTTGGTCGCTGCGACCAAGGCCTATGAGAAGTCCACAATTGATGAATCAATGCAGCTGGGAAAGTGGGTGGCAAATAATGACAATAACTTGGTAAAAGATGGAATCATTAACCTTGTAGATGGAAAGGTCAGACAGGATATATCTCTTAGATTGCAGAATGTGGAAAGAGGTGTCCTTGAGATTGAACTAGAATGCATTCCTCTTACACAATAGCTCATGCCATGGTGTGAAGTGTTGAAATCACATCATTTTAGATCCAAAAGCACTATTTTATATTAAGTCAATTACTGACAAAATTTGAAAATTACTTTGTTGTTAGCTATGATGGAGGCACCTTCAAATGGGTTTTCATTGCAAGGAGGGAAAAAAAAAAAAAAAAAAAAGAGATAATGTTCCTTACTGTAGCTGTTGTATATTATTGATAAATAAGATGGTGGTGGAATATATGCTAGATTAATCTGCCTTTGTTTC 1990 39.8 MSTQQQNSDSNGVSGACLFELLFPDSEMQGWDWSRMPSDSETQRWNWKKDQQLSGPQKRLEDLLRQSGNKYCADCGSPDPKWVSLNLGVFICIKCSGVHRSLGVHISKVFSVKLDNWTDEQVNTLISMGGNADVNKKYEAGIIDVNRKPKPDSCIEERFEFIRRKYELLQFYNANSSQNSSDNNSFSKRSSSCPQSSNSSSKHGSHDKRHFEKQATRHRIGHAFRNSRVRRDSEHKNSDKNSPAVSRQASAGMVEFVGLVKVNVVRGTNLAVRDVVTSDPYVILTLGHQSVRTRVIKNNLNPVWNESLMLSIPEHIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVAATKAYEKSTIDESMQLGKWVANNDNNLVKDGIINLVDGKVRQDISLRLQNVERGVLEIELECIPLTQ 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 33042113 33056382 - XM_039020219.1 Bhi12g01088 52900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01088 414 Pfam Putative GTPase activating protein for Arf 58 173 IPR001164 GO:0005096
Bhi12g01088 414 Gene3D Arf GTPase activating protein 38 180 IPR038508 -
Bhi12g01088 414 Pfam C2 domain 259 347 IPR000008 -
Bhi12g01088 414 CDD ArfGap 60 166 - -
Bhi12g01088 414 CDD C2_ArfGAP 257 401 - -
Bhi12g01088 414 ProSiteProfiles ARF GTPase-activating proteins domain profile. 57 179 IPR001164 GO:0005096
Bhi12g01088 414 SUPERFAMILY ArfGap/RecO-like zinc finger 57 173 IPR037278 -
Bhi12g01088 414 Gene3D C2 domain 257 412 IPR035892 -
Bhi12g01088 414 PRINTS HIV Rev interacting protein signature 69 88 IPR001164 GO:0005096
Bhi12g01088 414 PRINTS HIV Rev interacting protein signature 88 105 IPR001164 GO:0005096
Bhi12g01088 414 PRINTS HIV Rev interacting protein signature 109 130 IPR001164 GO:0005096
Bhi12g01088 414 ProSiteProfiles C2 domain profile. 239 356 IPR000008 -
Bhi12g01088 414 MobiDBLite consensus disorder prediction 176 247 - -
Bhi12g01088 414 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 1 414 IPR044518 GO:0005096|GO:0005543
Bhi12g01088 414 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 255 350 IPR035892 -
Bhi12g01088 414 MobiDBLite consensus disorder prediction 226 241 - -
Bhi12g01088 414 MobiDBLite consensus disorder prediction 176 201 - -
Bhi12g01088 414 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED 1 414 - -
Bhi12g01088 414 SMART arf_gap_3 57 179 IPR001164 GO:0005096
Bhi12g01088 414 SMART C2_3c 259 354 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01004 Bhi-Chr6:27535333 Bhi12g01088 Bhi-Chr12:33042113 1.54E-178 dispersed
Bhi08g01031 Bhi-Chr8:33662101 Bhi12g01088 Bhi-Chr12:33042113 4.86E-114 dispersed
Bhi12g01088 Bhi-Chr12:33042113 Bhi01g01975 Bhi-Chr1:44212987 2.65E-40 dispersed
Bhi12g01088 Bhi-Chr12:33042113 Bhi12g01089 Bhi-Chr12:33042113 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01088 K12486 - csv:101215531 743.036