Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01092 TTGCTTTTTTGTACTTTTCTTCAGAAAATAAATTCTCTCTCTATAATCCCTCTTTGCTTCTGTCTCTCTCAACGGCTTCATTTTGAAATTTTCTGTGTCTTTGAGCTGCATCGCCCTTCACTTTTTGATGTTCGTATTTCCCCGATGCGGTTGTTGAGTTCTTACTTTCACCCCCACCAAATCCTTGCTCTTTTTGAGGCTTTCCGTGCTTTTCCAATCACTGTTTCGTCGCGGTTTTAGAGGCAAGATTTGATAGAATGTGAAGTTTGTGGAAATGTTCCTGGGCTATTTAAATCCTAGATCCATGGTAGAAATATAAAATTGTTCTCTTAAGGATGGCATCTGGAAGTCCTTATTTTGATGATTTGCGGAGCAAACCAGAGGTTATTGATCCTCCTCAGAATGAAGATATGATGGACATCAGGGAAACTGTGGATGATCCAGTTCAAAATGAACTTAAACCGAATGTCGCTGTTTCCAGCAGCGTTCGCGAGCTTTTGGAATGCCCAGTGTGTTTGAATGCAATGTACCCTCCAATACATCAGTGTTCAAATGGCCACACATTGTGCTCTGGTTGCAAGCCTCGGGTGCACAATCGCTGTCCTACATGTAGGCATGAACTCGGCAATATTAGATGCCTTGCGTTGGAGAAGGTGGCTGCATCTCTAGAACTTCCATGTAAATATCATAGCTACGGTTGCATTGGCATATATCCATATTACAGCAAGGTCAAACATGAATCCCAATGTGTTTATAGACCTTATAGCTGTCCATATGCTGGATCCGAATGTTCAGTCGTTGGTGATATACCCTATTTGGTGGCTCACCTGAAAGATGATCATAAGGTAGACATGCACAGTGGAAGCACATTCAACCATCGTTACGTAAAATCCAACCCTCAAGAAGTTGAAAATGCAACGTGGATGCTAACGGTTTTCAGTTGCTTTGGTCAGTACTTTTGCCTGCATTTCGAAGCTTTCCAGCTCGGGATGGCTCCAGTATACATCGCTTTTCTACGGTTTATGGGCGATGATAATGATGCAAAGAACTACAGCTATAGTCTTGAGGTAGGTGGAAATGGGAGGAAGATGGTGTGGCAAGGAGTGCCCAGAAGCATCAGGGACAGCCATCGGAAAGTTCGGGACAGTTTCGATGGGCTCATTATCCAACGCAACATGGCTCTCTTCTTCTCTGGTGGGGATCGGAAGGAACTAAAGCTTAGGGTGACCGGTAGAATTTGGAAAGAACAGTGAAACTGGGAGAAATTGCTGAATAGGAACTATCACTTCAAATCCCATCTTCTTGGCCAGTAGGTTGGTTGCCGTTTTGTAGAGTAAATGGCTTTCTAATCATGTGTTTCTTTTTTCAATTAAGATGCAAACACTCTTTGCTCTTGCATGAAACCATGATTTAGAAAAGCTCCCCCGTCATTGCAGAACTTACTCCTCATATTTCCTTGTTGAGTATTAACAGAATCAGTTACCATTCTTAGA 1493 42.6 MASGSPYFDDLRSKPEVIDPPQNEDMMDIRETVDDPVQNELKPNVAVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYHSYGCIGIYPYYSKVKHESQCVYRPYSCPYAGSECSVVGDIPYLVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNDAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 33096220 33098894 - XM_039050849.1 Bhi12g01092 52904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01092 305 ProSiteProfiles Zinc finger SIAH-type profile. 110 170 IPR013010 GO:0008270
Bhi12g01092 305 Pfam Seven in absentia protein family 99 298 IPR018121 GO:0005737|GO:0006511|GO:0007275
Bhi12g01092 305 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 166 298 IPR008974 GO:0005515
Bhi12g01092 305 SUPERFAMILY TRAF domain-like 110 302 - -
Bhi12g01092 305 MobiDBLite consensus disorder prediction 1 24 - -
Bhi12g01092 305 PANTHER E3 UBIQUITIN-PROTEIN LIGASE DIS1 7 305 - -
Bhi12g01092 305 CDD Sina 171 299 - -
Bhi12g01092 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 165 IPR013083 -
Bhi12g01092 305 CDD RING-HC_SIAHs 55 93 - -
Bhi12g01092 305 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 7 305 - -
Bhi12g01092 305 ProSiteProfiles Zinc finger RING-type profile. 57 93 IPR001841 -
Bhi12g01092 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 99 IPR013083 -
Bhi12g01092 305 SUPERFAMILY RING/U-box 51 98 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01092 Bhi-Chr12:33096220 Bhi03g02659 Bhi-Chr3:66206047 3.71E-164 dispersed
Bhi12g01091 Bhi-Chr12:33096220 Bhi12g01092 Bhi-Chr12:33096220 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01092 K04506 - csv:101220834 645.58