Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01121 AGGACCCATCTGAAGTCAAAAGGATTTTATTTTTCTCAAATGGCCACTGATGGAGGTTCCCACAAAAGTAGACCTCTGAGTCCTCTGCCATTCTTTTTCTTTTTACAATATGTGATTGAAAAGGCCCACAGAACTGGAAGCAAGCAACAGAAACTCATCTCAAAGAGCTAAGGAACACATGAATTCACAAACACATCAAATTATTGAGTTGACATCTTTTCACATTTTGCCCATTTGGGGTTCTTCTTTCAGTTTTTTTCTCTGTTGATTCTTATCTTTCAAAGTTTCTGATGATTTGGGGAAGATCTAGCTCTGGTTCCTGTTCTGGGTCCTTTTGCCTACTTGGTGTTTGATGAAATGCATCCTCCATTGTTTTCACCTCTTGGGTGGCTTCAAGCTCCCTTTTGATGAAGCTGATTGATTGTCTGCTGGTTCTCAAATGGGCAAGAAGAAGGGCTGGTTTTATTTAGTCAAGAAGCTATTTGTTTCAGAGACACAGCCAAATCCTGAGAAGAAGCAAAAGAGATGGAAATGGGTGTTTGGAAGGATGAGGAACAAGAGATTAGCCACACTGACAGCGCCATCGCCATCAAAAGCGACGATGAGAATAGAGGAGGAAGAGGAGGAAGAGGAGAGGAAGCAGGCTCTTTCTGTGGCAATTGCGAGTACTGCCGCGGCCGAGGCGGCGGTTGCAGCAGCTAAGGCTGCTGTTGAGGTTGTTTGGCTCACAGGGACTCCTCAGTCTCATCAACAAGAGGCTGCTGAGGAAGTCTTTAAGCCTCTCAAGAAGGCCCCTCCATCTGATCTCCTTAAACGTGAAAGGGAAATCCATGAGTTTGCTGCTATTACTATCCAAACTGCTTTCCGTGGCTTCCTTGCGAGAAAAGCATTGAGAGCATTGAAAGGAATAGTGAGGCTACAGGCAATTATTAGAGGAAGAGCTGTTAGGCGCCAAGCCATTGCCACTTTGAAATGCTTGCAGTCCATCGTTAGCATACAATCACAAGTGTGTTCAAATAGACTTCATCTTCCTCAAAACACTTTCAATTCTCCTGAAACGAAGCAGTTTCAGAGCTGGAAAGATAGGATTATAAAGTTGGATTCGAACGATCAAAGGTGGGATGATAGCCTGTTATCAAAAGAAGAAGCAGATGCAGTGTTTTTGAGCAGGAAAGAGGCAGTGATCAGGAGAGAGCGAGTGAAGGAATACTTATTCGCCCACAGGAGGTCTGCAGAATCAGAAAGAAAAAAAGTAAAAGGAAGATGGAGATACTGGCTAGACCAATGGGTTGACACCCAACTCTCGAAAAGCAAAGAACTCGAAGATTTGGACTCCATTTTCACCTCAAATCCAAAACACAAAGAGACAACAAACGACAGATTCAAACCAAACCCAACAACAAAAAATATGGACAGAAACATAGAAGAATACCCCAACCAATCTCCATCTCAAAAACCAGTTCTGAAACAGCTCTCTCACCACAAGAAGCAACGTTCATTGGGAGGTGGAATAGACTCAAACAGCTCATTTTCAAGCTCCCCACTGGTACCAACATACATGGCTGCCACTGAATCAGCAAAGGCAAAATCAAGATCCTTAAGCTCCCCCAAGCTAAGGCCAGCAGGGGGATTAGACACTTGTTCGGATGGGAATTCTCCATGCAAGACAAAGCAGCTCTGTTTAGTTTCTTCAATGGTGAGTGAAGTTGGAATTAGCAGTGGGAGAAGAGGTTTTCATCAGCAGCAAAGATCACCAGGGCTGAAGGGGCTTCCAGGGCCAACAAGATCAAGCAGAACTCTCACTAAAGATTTGAGCATTGATTCTGAGCATTCCTTGCCAAACTGGGATAGACAAAGTGCCTTCCAATGATTGTTTTCTTGTTGGGCAGATTGATATTAAAATGAATACAGAAACAGTTTGTGGTGTTGTGCTCATATATCTAATAAAAATGTGTTTGCTGTTTGTAGAT 1970 43.3 MGKKKGWFYLVKKLFVSETQPNPEKKQKRWKWVFGRMRNKRLATLTAPSPSKATMRIEEEEEEEERKQALSVAIASTAAAEAAVAAAKAAVEVVWLTGTPQSHQQEAAEEVFKPLKKAPPSDLLKREREIHEFAAITIQTAFRGFLARKALRALKGIVRLQAIIRGRAVRRQAIATLKCLQSIVSIQSQVCSNRLHLPQNTFNSPETKQFQSWKDRIIKLDSNDQRWDDSLLSKEEADAVFLSRKEAVIRRERVKEYLFAHRRSAESERKKVKGRWRYWLDQWVDTQLSKSKELEDLDSIFTSNPKHKETTNDRFKPNPTTKNMDRNIEEYPNQSPSQKPVLKQLSHHKKQRSLGGGIDSNSSFSSSPLVPTYMAATESAKAKSRSLSSPKLRPAGGLDTCSDGNSPCKTKQLCLVSSMVSEVGISSGRRGFHQQQRSPGLKGLPGPTRSSRTLTKDLSIDSEHSLPNWDRQSAFQ 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 33630703 33634253 - XM_039020112.1 Bhi12g01121 52933

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01121 476 Gene3D - 130 182 - -
Bhi12g01121 476 MobiDBLite consensus disorder prediction 448 476 - -
Bhi12g01121 476 MobiDBLite consensus disorder prediction 303 366 - -
Bhi12g01121 476 PANTHER IQ-DOMAIN 11 5 462 - -
Bhi12g01121 476 PANTHER IQ-DOMAIN 5-RELATED 5 462 - -
Bhi12g01121 476 MobiDBLite consensus disorder prediction 379 404 - -
Bhi12g01121 476 Pfam IQ calmodulin-binding motif 134 152 IPR000048 GO:0005515
Bhi12g01121 476 ProSiteProfiles IQ motif profile. 131 159 IPR000048 GO:0005515
Bhi12g01121 476 Pfam Protein of unknown function (DUF4005) 323 428 IPR025064 -
Bhi12g01121 476 MobiDBLite consensus disorder prediction 426 476 - -
Bhi12g01121 476 MobiDBLite consensus disorder prediction 316 342 - -
Bhi12g01121 476 ProSiteProfiles IQ motif profile. 155 182 IPR000048 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01121 - - - csv:101203390 830.091
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02931 Bhi-Chr11:79211734 Bhi12g01121 Bhi-Chr12:33630703 1.04E-39 dispersed
Bhi12g01121 Bhi-Chr12:33630703 Bhi06g00668 Bhi-Chr6:15674751 1.72E-42 dispersed
Bhi12g01120 Bhi-Chr12:33630703 Bhi12g01121 Bhi-Chr12:33630703 1.30E-96 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi06g00669 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi06g00668 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi02g01384 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01383 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01385 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi09g03139 . 1 438 IQD Protein Family AT2G26180 61.6 9.3e-120 427.9
Bhi03g00330 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00327 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00326 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00329 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00328 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00324 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00323 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00325 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi01g03276 . 83 266 IQD Protein Family AT2G33990 53.5 1.6e-48 190.7
Bhi01g03276 . 86 259 IQD Protein Family AT3G15050 62.7 8.5e-55 211.5
Bhi03g00330 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00327 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00326 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00329 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00328 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00324 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00323 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00325 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi12g01121 . 124 476 IQD Protein Family AT5G13460 52.1 9.4e-78 288.5
Bhi12g02233 . 1 508 IQD Protein Family AT4G00820 51.3 2.8e-113 406.8
Bhi12g02232 . 1 509 IQD Protein Family AT4G00820 51.2 3.7e-113 406.4
Bhi01g00618 . 1 466 IQD Protein Family AT4G00820 50.5 1.1e-104 378.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007465 1 2 1 1 0 1 2 1 1 0 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 2 0 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g01121 Bhi_Chr12 FPKM 5.828132 8.121146 3.612272 2.69939 13.230329 13.689898 12.975683 23.297907 25.505207 22.740286