Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01178 TGTTCCCAAACACACTCCCAAACCCCCAATTCAGCTAAATTTAATTCCCAAAAAAATATTTATAAAATTTAAATTAAAATTCCTCAATCCTCCATAGACACCCCTTCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTCTCTCTCTTAACCATGTCTGGTTCTGATGGTGTTAACAACAACAATGGCGCCATAATCGACCATTCTCAACAACAGAGACATCAACACCAAATACAGGGGAATCAGTCCACCAACAATGGCGCTTTGGTCGTCAGAAAACCTCCGTCCAAGGACCGCCACAGCAAGGTCGACGGCCGTGGCCGTCGTATTCGTATGCCCATCGTTTGCGCCGCTCGCGTTTTTCAACTCACCCGCGAATTGGGTCATAAATCCGACGGCCAGACTATCGAATGGCTTCTTCGTCAAGCAGAGCCGTCGATTATCGCCGCCACTGGCACCGGCACCACTCCGGCTAGCTTCTCCACTATCTCCGCCTCACTCCGAGGCACTCCTGCCGTTGCTTCCTCTTCTTCTTCCTCTCTCGACCATAAACCCCTTTTAGCTCCGGCGCCCTTCATTTTAGGTAAACGTGTCAGAACCGATGACGATGGAGCTAATAAAGACGACAGCGGCGGCGGTGGCATTTCGGTCGGCCCCACTATTGGTTCGATTATGGGTCCGGCTGCCACAGGTGGGTACTGGGCGATTCCCGCGAGGTCGGATTTTGGACAGGTGTGGAGCTTTGCGGCGGCGGCAGCTCCGGAGATGGTGATTCAGCCAACCGCCGTTTCTCATCAAGCGTCGCTGTTCGTTCAGCAGCAATCGATGGGAGAGGCGTCGGCGGCGAAAGTGGGAAATTACCTTCCGGGGCATCTGAATTTGCTTGCTTCTTTATCAGGTGGACCAGGAAGTTCCGGACGAAGAGACAACGACCACCATTGATTTCGTAATCCGGCCGCCGTTCACGACGGCGTTGTAATAATTCTGTCCCTCTGATCTTGTGGGTGTTCGTGTTCATAGAATATATAACAACCACCCTCTTTATCGTTTTCTTTTTCCCCTTTTCGTGTGGAGCTTTAGACCATTTTAGGGTTTTAGGCTATTGAATTCTTAGCTTGGAATGAGTGAATTTTTAGGGTTTTCGTCTCTCTTTTGGAAGATTGATTAGGGTTTTTAACCTTCAAAAAAGGGTGTGGCTGTTTTCCCCAGATTTTGCAACAACCGTGTTAATTTGGGTGAATTTATTTCTCCATTTCAATGGAAATCCATGGAGGAATTGAGCTGATGGCTTTCTCTTTATCCCCTTTTTCCTTTGAAATTTTGGGTTTGTTCTGTAATACTTTCACAAACAAGAAAATTAGTGTTCTTCTTCTTCTTC 1384 47.47 MSGSDGVNNNNGAIIDHSQQQRHQHQIQGNQSTNNGALVVRKPPSKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGTPAVASSSSSSLDHKPLLAPAPFILGKRVRTDDDGANKDDSGGGGISVGPTIGSIMGPAATGGYWAIPARSDFGQVWSFAAAAAPEMVIQPTAVSHQASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHH 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 34894260 34895643 - XM_039020382.1 Bhi12g01178 52990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01178 262 MobiDBLite consensus disorder prediction 147 167 - -
Bhi12g01178 262 MobiDBLite consensus disorder prediction 42 57 - -
Bhi12g01178 262 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 259 IPR005333 GO:0003700
Bhi12g01178 262 MobiDBLite consensus disorder prediction 18 39 - -
Bhi12g01178 262 ProSiteProfiles TCP domain profile. 45 99 IPR017887 -
Bhi12g01178 262 MobiDBLite consensus disorder prediction 18 57 - -
Bhi12g01178 262 Pfam TCP family transcription factor 45 129 IPR017887 -
Bhi12g01178 262 PANTHER TRANSCRIPTION FACTOR TCP21-RELATED 1 259 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01106 Bhi-Chr7:34862439 Bhi12g01178 Bhi-Chr12:34894260 1.31E-105 dispersed
Bhi12g01178 Bhi-Chr12:34894260 Bhi12g02424 Bhi-Chr12:76496895 4.83E-33 dispersed
Bhi12g01178 Bhi-Chr12:34894260 Bhi07g01576 Bhi-Chr7:45137800 4.28E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2656 PF03634 TCP 4.90E-32 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01178 K16221 - csv:101214586 416.387