Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01191 ATGCCCATTTTGGACCACCATGATAATAATCAACCTCCTCCCTCTCTTCCCCACCACCGTCTCCTCCTCCCTGCCGCCGATGATCTCGCCGCTGCCGTCCCCGCCTTCTCTTCTACTGCTCTCCATCGCAAGAAACGGATGCCCAGAAACCGCCGCCGCTCTTCTTCTAATCTTCCTTTCTTTCCTCCTTCTTCCTCTTCCACTCCTCCTCCTCGGGTAATTGATCCAATGAAGCTGAAGTTTCTTTTCCAGAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTGAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCAGTATTGGAGTCTAAAGAAGGAATGATAATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTTAAATACAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGGAGACTTTGTCAATGCCCATGGCTTACATCTAGGAGATTTCATCATGGTTTATCAAGATAGTGAAGAACATAACTATGTGATTCAAGCAAAAAAGGCTTCCGAGCAAGAAATATATTCCGACATAGCAACCAACGACATTGTGATCAACAACGACATTATGTTTCAAGACTATGATGCTAGCAAAGTGGCCAGCTCCATATATGTGCCTAGTCCAATCATGGAAGATCCCGTGTCGTCATTTATCTATGACACTAGTTCTGCCTTCGACAACGATTCACCTTTCGACTTTATGAGTGGATCAATGACCAACTACTCGAGACTGGGAGCTCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGACTTCTACTAA 834 44.84 MPILDHHDNNQPPPSLPHHRLLLPAADDLAAAVPAFSSTALHRKKRMPRNRRRSSSNLPFFPPSSSSTPPPRVIDPMKLKFLFQKELKNSDVSSLRRMILPKKAAETHLPVLESKEGMIITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTGDFVNAHGLHLGDFIMVYQDSEEHNYVIQAKKASEQEIYSDIATNDIVINNDIMFQDYDASKVASSIYVPSPIMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRLGALEGFGSVENLSLDDFY 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 35419943 35422897 - XM_039019045.1 Bhi12g01191 53003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01191 277 SUPERFAMILY DNA-binding pseudobarrel domain 81 180 IPR015300 -
Bhi12g01191 277 Pfam B3 DNA binding domain 83 181 IPR003340 GO:0003677
Bhi12g01191 277 MobiDBLite consensus disorder prediction 40 72 - -
Bhi12g01191 277 ProSiteProfiles B3 DNA-binding domain profile. 83 185 IPR003340 GO:0003677
Bhi12g01191 277 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 36 277 - -
Bhi12g01191 277 CDD B3_DNA 81 183 IPR003340 GO:0003677
Bhi12g01191 277 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 36 277 IPR044800 GO:0003700
Bhi12g01191 277 SMART B3_2 83 185 IPR003340 GO:0003677
Bhi12g01191 277 Gene3D - 79 197 IPR015300 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01373 Bhi-Chr9:34493736 Bhi12g01191 Bhi-Chr12:35419943 8.63E-37 dispersed
Bhi12g01191 Bhi-Chr12:35419943 Bhi03g00475 Bhi-Chr3:9403346 1.42E-18 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2658 PF02362 B3 7.60E-18 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01191 - - csv:101222512 408.297