Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01201 TCAAAAACAGTAAATTACAATTTTATTTTCTTCCCCACTTTGCCCCTCACACTCTCTCCGGAGAGATGTCGCCATGTCTTCCACTTCACTTCCTCTTCACTGTTGCAGCACTTCTCACATCTCCAGTCACCTCCCATTTCTCTTCTACGACCTCCTCGCCGTCGCCGGACTCCGCCCCGTCGCTCTCCGACTGGAGATCTGCTCGTGCCACCTACTACGCCGCCTCCGACCCTCGCGATGCGGTGGGCGGAGCCTGTGGTTATGGCGATTTAGTGAAGGCAGGCTATGGCATGGCGACTGTGGGACTCAGCGAGTCGCTATTTGAACGCGGACAGATCTGTGGTGCCTGCTTTCAGCTCCGGTGTGTAGAGGACCTCCGGTGGTGTATTCCTGGTACCTCTATCATTGTCACTGTTACTAATTTCTGTGCGCCTAATTATGGCTTCACGGCTGAGGGTGGAGGACATTGTAACCCTCCTAATAAGCATTTTGTTCTCCCTATTGAGGCGTTTGAGAAGATCGCTATCTGGAAGGCGGGAAACATGCCTGTTCAGTATCGGAGGATCAAATGCCGAAAGGAAGGAGGTATTCGATACACAGTTTCTGGGTACGGCATCTACCTCTCAGTATTGATAAGTAACGTTGCAGGCGCTGGAGATGTGAGTGCTGTAAAGATCAAGGGGTCGAGAACCGGTTGGCTTCCGATGGGTCGTAATTGGGGGCAGAACTGGCACATTAATGCTGATTTGAACCATCAAGCCCTTTCCTTCGAAGTCACTAGCAGTGATGGAGTAACAATTACGTCTTACAATGTTGCTCCAAAGGATTGGAATTTTGGGCAGACTTTTGAAGGCAAGCAATTTCAATCTTGAAATTTTCCACTCTTGTAATTTTTTGTCTGTAAAAGTTTTAAATTAATTTCCTTTCTCTCTACTAGGCATTTACAAAAGGGTTTTTCTTCTTCTTCGTCTTTGTTTTGGGTGCTTAATTTTTCCTTTTTTTTTCCTCTTAGCCGAAGGGTAATAGATTTTGATTTTCATATCTTCATCAAGTGTACAAGAACAGTGCTCATCTCAAGAGGTTTTGGATGGTATTTGTGAAGGATAAACGTACGACAATTCGATCTAGGTTATATTATTAA 1141 45.84 MSPCLPLHFLFTVAALLTSPVTSHFSSTTSSPSPDSAPSLSDWRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRYTVSGYGIYLSVLISNVAGAGDVSAVKIKGSRTGWLPMGRNWGQNWHINADLNHQALSFEVTSSDGVTITSYNVAPKDWNFGQTFEGKQFQS 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 35940930 35946869 - XM_039020316.1 Bhi12g01201 53013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01201 268 Pfam Expansin C-terminal domain 175 252 IPR007117 -
Bhi12g01201 268 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 61 174 IPR007112 -
Bhi12g01201 268 Pfam Lytic transglycolase 79 164 IPR009009 -
Bhi12g01201 268 SUPERFAMILY PHL pollen allergen 171 263 IPR036749 -
Bhi12g01201 268 PANTHER EXPANSIN-A15 24 267 IPR002963 GO:0009664
Bhi12g01201 268 SUPERFAMILY Barwin-like endoglucanases 42 192 IPR036908 -
Bhi12g01201 268 Gene3D - 27 170 IPR036908 -
Bhi12g01201 268 SMART dpbb_1 78 164 IPR007112 -
Bhi12g01201 268 PRINTS Expansin/Lol pI family signature 42 57 IPR007118 GO:0005576
Bhi12g01201 268 PRINTS Expansin/Lol pI family signature 60 78 IPR007118 GO:0005576
Bhi12g01201 268 PRINTS Expansin/Lol pI family signature 82 100 IPR007118 GO:0005576
Bhi12g01201 268 PRINTS Expansin/Lol pI family signature 157 173 IPR007118 GO:0005576
Bhi12g01201 268 PRINTS Expansin/Lol pI family signature 211 225 IPR007118 GO:0005576
Bhi12g01201 268 PRINTS Expansin/Lol pI family signature 249 263 IPR007118 GO:0005576
Bhi12g01201 268 PRINTS Expansin signature 73 87 IPR002963 GO:0009664
Bhi12g01201 268 PRINTS Expansin signature 100 111 IPR002963 GO:0009664
Bhi12g01201 268 PRINTS Expansin signature 113 123 IPR002963 GO:0009664
Bhi12g01201 268 PRINTS Expansin signature 132 149 IPR002963 GO:0009664
Bhi12g01201 268 PRINTS Expansin signature 149 162 IPR002963 GO:0009664
Bhi12g01201 268 PRINTS Expansin signature 173 185 IPR002963 GO:0009664
Bhi12g01201 268 PRINTS Expansin signature 185 206 IPR002963 GO:0009664
Bhi12g01201 268 PRINTS Expansin signature 220 241 IPR002963 GO:0009664
Bhi12g01201 268 PRINTS Expansin signature 249 265 IPR002963 GO:0009664
Bhi12g01201 268 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 184 263 IPR007117 -
Bhi12g01201 268 Gene3D - 175 266 IPR036749 -
Bhi12g01201 268 PANTHER EXPANSIN-A13 24 267 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01201 Bhi-Chr12:35940930 Bhi08g00598 Bhi-Chr8:19742027 1.47E-92 dispersed
Bhi12g01201 Bhi-Chr12:35940930 Bhi12g01202 Bhi-Chr12:35941924 2.81E-123 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01201 - - csv:101206236 527.709