Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01202 CAATTTCAAAAACAGTAAATTACAATTTTATTTTCTTCCCCACTTTGCCCCTCACACTCTCTCCGGAGAGATGTCGCCATGTCTTCCACTTCACTTCCTCTTCACTGTTGCAGCACTTCTCACATCTCCAGTCACCTCCCATTTCTCTTCTACGACCTCCTCGCCGTCGCCGGACTCCGCCCCGTCGCTCTCCGACTGGAGATCTGCTCGTGCCACCTACTACGCCGCCTCCGACCCTCGCGATGCGGTGGGCGGAGCCTGTGGTTATGGCGATTTAGTGAAGGCAGGCTATGGCATGGCGACTGTGGGACTCAGCGAGTCGCTATTTGAACGCGGACAGATCTGTGGTGCCTGCTTTCAGCTCCGGTGTGTAGAGGACCTCCGGTGGTGTATTCCTGGTACCTCTATCATTGTCACTGTTACTAATTTCTGTGCGCCTAATTATGGCTTCACGGCTGAGGGTGGAGGACATTGTAACCCTCCTAATAAGCATTTTGTTCTCCCTATTGAGGCGTTTGAGAAGATCGCTATCTGGAAGGCGGGAAACATGCCTGTTCAGTATCGGAGTGTATGTTGCTGTCTGCTGACTGTTGACTCTTTCGAGATTATATTCCCTCTATTTTCAATTTCAGTGGTGGGCCTTCCATTATTTAGATCTTTTGGACCAACCTCTTTATGGCCTTATGTTCAAAAGGAAGCTAAAGTTCTATTCAAAATTCAATTGTAGCTACATCTGAAATATGGAAGGATCTAAATAATAGAATTTTCTCCAACATCCCGAGAGCTTCTGATGAGGTTCATATAAAAATAAAAAAAAATGAGAAGAAAAGAGAAGGAATAAAAAGAGGAACTTCTGCTGAGGTTCTTGACTAGGTGAAATTGGTGATTTCTTTGTGTACCCTTCTCAAAGTTCTTTCTGACGTTACTTTTTTGCTTCGTGCCAATTAGAGTAGCTTTATCATAAATTCCCTTTGTGGATACATCCATCCGTCCCGTTTCTATGTATTTTTCTGCTTACACCATAAAGCTATGGCCTCGAACTATAA 1046 44.93 MSPCLPLHFLFTVAALLTSPVTSHFSSTTSSPSPDSAPSLSDWRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSESLFERGQICGACFQLRCVEDLRWCIPGTSIIVTVTNFCAPNYGFTAEGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRSVCCCLLTVDSFEIIFPLFSISVVGLPLFRSFGPTSLWPYVQKEAKVLFKIQL 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 35941924 35946874 - XM_039020317.1 Bhi12g01202 53014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01202 218 PRINTS Expansin/Lol pI family signature 42 57 IPR007118 GO:0005576
Bhi12g01202 218 PRINTS Expansin/Lol pI family signature 60 78 IPR007118 GO:0005576
Bhi12g01202 218 PRINTS Expansin/Lol pI family signature 82 100 IPR007118 GO:0005576
Bhi12g01202 218 PRINTS Expansin/Lol pI family signature 157 173 IPR007118 GO:0005576
Bhi12g01202 218 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 61 169 IPR007112 -
Bhi12g01202 218 PANTHER EXPANSIN-A15 24 170 IPR002963 GO:0009664
Bhi12g01202 218 SUPERFAMILY Barwin-like endoglucanases 42 169 IPR036908 -
Bhi12g01202 218 Gene3D - 27 169 IPR036908 -
Bhi12g01202 218 Pfam Lytic transglycolase 79 164 IPR009009 -
Bhi12g01202 218 PRINTS Expansin signature 73 87 IPR002963 GO:0009664
Bhi12g01202 218 PRINTS Expansin signature 100 111 IPR002963 GO:0009664
Bhi12g01202 218 PRINTS Expansin signature 113 123 IPR002963 GO:0009664
Bhi12g01202 218 PRINTS Expansin signature 132 149 IPR002963 GO:0009664
Bhi12g01202 218 PRINTS Expansin signature 149 162 IPR002963 GO:0009664
Bhi12g01202 218 PANTHER EXPANSIN-A13 24 170 - -
Bhi12g01202 218 SMART dpbb_1 78 164 IPR007112 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01202 Bhi-Chr12:35941924 Bhi10g00718 Bhi-Chr10:15399062 2.25E-43 dispersed
Bhi12g01201 Bhi-Chr12:35940930 Bhi12g01202 Bhi-Chr12:35941924 2.81E-123 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01202 - - csv:101206236 320.087