Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01215 ATGGTTCTCTCCAAGACTGCTTCTCAGACCGATGTCTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCAAGATTCAAAATGCCGGAAAATTCGATCCCGAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTAGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTTGATATGGATGAATATCCTGTCACTACAGAGCTTCAGAACCGATGTGTGAATATGATAGCTCATTTGTTCAATGCCCCATTGGGTGATTCTGAGACGGCAGTGGGAGTTGGAACTGTGGGATCGTCGGAGGCCATAATGTTGGCTGGTTTGGCTTTCAAGAGAAAATGGCAGAACAGAAGGAAGGCTGAAGGCAAGCCCTATGACAAGCCCAACATTGTCACTGGAGCTAATGTCCAGGTATGCTGGGAGAAATTTGCACGGTACTTTGAGGTAGAACTGAAGGAAGTGAAATTGAGGGAAGGTTATTATGTGATGGATCCAGAGAAAGCTGTTGAGTTGGTGGATGAGAACACCATCTGTGTTGCAGCCATCTTGGGTTCCACTCTCAATGGAGAATTTGAAGATGTAAAGCTCTTAAATGATCTCTTAATTGAGAAGAACAAAGAAACTGGATGGGATACTCCTATTCATGTTGATGCTGCAAGTGGAGGGTTTATTGCCCCATTCCTTTACCCTGAGCTAGAATGGGACTTTAGGCTGCCCCTTGTAAAGAGTATTAATGTAAGTGGCCATAAGTATGGGCTTGTTTATGCTGGAATTGGTTGGGTTATCTGGAGGAACAAAGAAGATTTGCCTGAAGAACTTATCTTCCATATCAACTATCTTGGAGCTGACCAACCCACTTTCACCCTCAATTTCTCCAAAGGATCTAGCCAAGTCATTGCTCAGTATTACCAATTGATTCGCTTGGGTTATGAGGGATACCAAAACGTGATGGAAAACTGCAGAGAAAACATGATAGTTCTAAAGGAAGGACTTGAAAAAACAGGGCGATTCAACATTGTGTCAAAGGACAAGGGAGTTCCACTTGTGGCCTTCTCCTTGAAAGACAACACACGCCATAATGAGTTTGAAGTCTCAGAAATGCTCAGGAGATTCGGCTGGATCGTACCAGCTTACACCATGCCTCCTGATGCACAACACATAACAGTTCTCAGAGTAGTGATCCGAGAAGACTTTTCTCGCACGCTTGCTGAGCGTCTTGTGACCGATATTGAGAAAACACTTCACGAACTCGACAGCCTCCCGTCGAGGGCCGATGTCAAGACAACGGTGGCTGGAGAAGAGACGCAGAAGAACGACGTCGTGGTGGCGAAGAAGAGTGCACTTGAGACACAGAGGGAGATCACAACTGCTTGGAGGAAGTTTGTGATGGAAAAGAAGAAGACTAATGGAGTTTGTTAG 1500 45.47 MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPEKAVELVDENTICVAAILGSTLNGEFEDVKLLNDLLIEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYQNVMENCRENMIVLKEGLEKTGRFNIVSKDKGVPLVAFSLKDNTRHNEFEVSEMLRRFGWIVPAYTMPPDAQHITVLRVVIREDFSRTLAERLVTDIEKTLHELDSLPSRADVKTTVAGEETQKNDVVVAKKSALETQREITTAWRKFVMEKKKTNGVC 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 36198120 36208294 + XM_039019275.1 Bhi12g01215 53027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01215 499 PANTHER GLUTAMATE DECARBOXYLASE 1 499 - -
Bhi12g01215 499 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Bhi12g01215 499 CDD DOPA_deC_like 59 439 - -
Bhi12g01215 499 Gene3D - 361 448 - -
Bhi12g01215 499 PANTHER GLUTAMATE DECARBOXYLASE 1 499 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bhi12g01215 499 Gene3D - 1 65 - -
Bhi12g01215 499 Gene3D - 66 360 IPR015421 GO:0003824
Bhi12g01215 499 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bhi12g01215 499 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01977 Bhi-Chr8:57030061 Bhi12g01215 Bhi-Chr12:36198120 0 dispersed
Bhi08g01978 Bhi-Chr8:57030322 Bhi12g01215 Bhi-Chr12:36198120 0 dispersed
Bhi12g00996 Bhi-Chr12:30431809 Bhi12g01215 Bhi-Chr12:36198120 0 dispersed
Bhi12g00997 Bhi-Chr12:30509874 Bhi12g01215 Bhi-Chr12:36198120 0 dispersed
Bhi12g01215 Bhi-Chr12:36198120 Bhi12g02437 Bhi-Chr12:76832375 8.97E-20 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01215 K01580 - csv:101216119 993.03