Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi12g01258 | ATGGCACTTACAAATTCAGCTGTACAAGAAGTGGATGGCATGGAGAAAAATGGTGGATATTTGAAGACTTTAGCCACTGGAAAAGGCCATGAAAATCCCGACGGTAACTTCGTGTTCCGAAACACGACGAATTACCAACTCGATCATCAACAACAACAGCAACAACAACAGCAATCTCTCATCAATTTCAAGTGTGGGATTGAGAATACTATTTTGGGTCATAAGATGAATAGTGAATCTTTGTTGAGCTTTGAAGCACAAGGGATTTGTCAATTAGATCACACTTATAATTGGGACGATCAGCAACGTGTGATGGAAGATCCTAATTGCTTTCAAACAGCTACCAATCATAATAATTACAGCCCTTCAAAAGATCATCATAATAAAAATGGAGATAATGGGTCTGTTTATGAGTGGCTTTATTCTGAACCTACAACTGATTTTTCTGATGCCATTCAAGAAGCTGAAGCAACTCAGGATATTATTCTCAATCACAAGCGATCCCATACGGGAGAGAGCAGTGGGAGTGTTTGTAAGAAACAATGTACTGCTGCAGCTAAGAAACAGAAGACCAAATCACCAACAACCAAGGATCCTCAGAGCATTGCAGCCAAGAATCGACGAGAAAGGATTAGCGAGAGGCTCAAAATACTCCAAGATTTGGTTCCCAATGGCTCCAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGCTATGTCAAATTTCTTCAACTACAAGTGAAGATCCTAGCGACCGATGAATTTTGGCCTGTTCAAGGTGGGAAAGCTCCAGATATTTCACAAGTAAAAGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACAGTGAAAAGTGA | 879 | 39.93 | MALTNSAVQEVDGMEKNGGYLKTLATGKGHENPDGNFVFRNTTNYQLDHQQQQQQQQQSLINFKCGIENTILGHKMNSESLLSFEAQGICQLDHTYNWDDQQRVMEDPNCFQTATNHNNYSPSKDHHNKNGDNGSVYEWLYSEPTTDFSDAIQEAEATQDIILNHKRSHTGESSGSVCKKQCTAAAKKQKTKSPTTKDPQSIAAKNRRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK | 292 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 37466784 | 37469350 | - | XM_039051113.1 | Bhi12g01258 | 53070 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi12g01258 | 292 | Gene3D | - | 188 | 252 | IPR036638 | GO:0046983 | |
| Bhi12g01258 | 292 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 47 | 280 | - | - | |
| Bhi12g01258 | 292 | MobiDBLite | consensus disorder prediction | 184 | 208 | - | - | |
| Bhi12g01258 | 292 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 195 | 244 | IPR011598 | GO:0046983 | |
| Bhi12g01258 | 292 | CDD | bHLH_AtIND_like | 197 | 258 | - | - | |
| Bhi12g01258 | 292 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 47 | 280 | - | - | |
| Bhi12g01258 | 292 | MobiDBLite | consensus disorder prediction | 187 | 201 | - | - | |
| Bhi12g01258 | 292 | Pfam | Helix-loop-helix DNA-binding domain | 202 | 245 | IPR011598 | GO:0046983 | |
| Bhi12g01258 | 292 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 193 | 253 | IPR036638 | GO:0046983 | |
| Bhi12g01258 | 292 | SMART | finulus | 201 | 250 | IPR011598 | GO:0046983 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi11g01138 | Bhi-Chr11:33718223 | Bhi12g01258 | Bhi-Chr12:37466784 | 2.59E-24 | dispersed | |
| Bhi12g01258 | Bhi-Chr12:37466784 | Bhi02g00893 | Bhi-Chr2:18973805 | 8.56E-17 | dispersed | |
| Bhi12g01258 | Bhi-Chr12:37466784 | Bhi04g00411 | Bhi-Chr4:10618267 | 5.55E-25 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 2665 | PF00010 | HLH | 1.00E-07 | No_clan | Bhi | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi12g01258 | - | - | bhj:120092869 | 527.709 |