Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01270 TATTAAAAAATAGAAAAAAAATGTTGTTATCGTGACTATAAATTCATATCCTCGGTATTCGTCAAGAATAAGATGTCGATCACTTCATTCTCAACGATTTTATAAACTTTTTTTAACCTCTTTGGTTCTTCATTTTATCTAATCTTCAATCTTCATCCCTTACAATCTCTCTGCATTTTCTCTTTCCAACCTTAGGCATCGTCGTAAAGATCTCCGTGAAAATCTGAATCGCGTGTTTCGATTTTCCAAAAGTTTCCTCTCATTTCCGGCTCGTGATTCCATCTGTACACACAATCAAAACCTTTAAAGCGATGGATTCTACACGCAATTGATGCAGGAAGAAGAACGATTAATCGGCGGCAACTACTTGTTTATGTGTTGAAGCCGAGAAGAGGATGGCCGTAAGCGGCGGAAGAGAGGAGGAGGAAGGAAGCCGGCGGCTGGATTCGTCGTCATCGGAGGAGGAGTATAACGTAGAGAGCGTTCGTGAACGGATCACGTCGTCGCGAGGGAGCCGATTCAATTTGATTCAGAAACAGTTGAGAATTGATCGGAATAGTAGAAGGTTTAGCCGTGAAAATCTCATTAATGGCATTAAGTGCCTCGTTATCCTCCCTGACAGCAGGTGGTATAGAGCGTGGACGAAGTTCATACTGATATGGGCAGTGTATTCTTCCTTCTTCACGCCCATGGAATTCGGATTCTTCAGGGGATTACCAGAGAATCTATTTATACTCGACATTGTTGGACAAATTGCTTTCCTCTTAGACATTGTTTTCCAATTCTTCCTTGCCTACAGAGACCCGCAGACATACCGAATGGTCTATAAGCGCACTCCAATAGCTCTCAAGTACTTGAAATCCACTTTTGTGACTGATTTGCTCAGCTGTATGCCGTGGGACATCATTTATAAGGCTTGTGGGAGGAGAGAGGAGGTGAGATACCTTCTATGGATAAGGTTATTTCGGGTGCGGAAAATTGATGCCTTTTTTAAGACGATGGAGAAGGATATACGTATTAATTATATGTTTACTAGAATTGTAAAGCTACTTGTTGTTGAACTTTACTGCACACATACTGCGGCCTGCATCTTTTACTATTTGGCAACTACTCTTCCCGCTTCTGAAGAAGGATACACATGGATCGGAAGCTTAAAATTAGGGGACTACAGTTACTCACATTTCAGAGAGATAGATTTATGGAAACGTTACACCACATCTTTATATTTTGCTATTGTAACCATGGCCACTGTTGGTTATGGTGATATACATGCAGTCAACTTAAGGGAAATGATATTCATTATGATTTACGTGTCGTTTGACATGGTTCTTGGTGCTTACTTGATTGGTAACATGACTGCATTGATTGTAAAAGGATCCAAGACAGTGAAATTCAGGGATAAAATGGCAGATGTAATGAAATACATGAACAGAAATAGACTTAGCAGGGAAATCCGTGATCAGATCAAAGGTCACTTACGTTTACAGTATGAAAGTAGCTACACTGAGGCTACTGTTCTACAAGACATCCCAATATCAATCCGTGCTAAAATTTCTCAATCATTGTATTTGCCTTATATTCAGAATGTTTCTCTCTTTAGAGGGTGCTCTCCAGAGTTCATCAATCAAATAGTTATTAGACTCCATGAAGAGTTTTTTCTGCCTGGAGAGGTGATAATGGAACAAGGAAATGTGGTCGATCAACTTTATTTTGTCTGTCATGGTGTGCTGGAGGAAGTGGGAATAGGTCAAGATGGTTCAGAAGAGACCATAGATTTACTACAACCCAACAGCTCTTTTGGAGAGATTTCAATTCTTTGCAATATTCCTCAACCTTATACAGTTCGAGTGTGTGAATTATGTAGACTCTTGCGCCTTGATAAGCAGTCCTTTACAAATATCCTTGACATATATTTTTACGACGGGAGGAAAATCTTGAACAACCTTCTAGAGGGAAAAGAAACGAACCTTCGAGTTAAGCAATTGGAATCAGATATCACATTTCATATTGGTAAACAAGAAGCTGAACTTGCTCTCAAGGTGAACAGTGCAGCATATCACGGAGATCTGTACCAATTAAAAGGTCTTGTTCGAGCTGGAGCTGATCCAAACAAGACAGATTATGATGGAAGGTCGCCTTTGCATCTTGCAGCATCCAGAGGATTCGAGGATATAGTAGTTTTTCTTATTCAGGATGGAGTAAACATTGACCTTACAGATAATTTTGGCAATACACCATTAATGGAAGCCATCAAGAATGGGAACGATCAAGTTGCTGTTTTGCTTTCTAAACAAGGTGCTTCACTGAAGGTTGAGAATCCTGGTAGCTTCCTATGTACAGCAGTTTCAAGGGGTGATTCAGATCTTCTTAAGAGATTATTGTGCTATGGCATTGATCCCAACTCCAAAGATTATGATTTCCGAACTCCGCTACATATAGCTGCCTCAGAAGGACTAACTTTGATGGCAAAGTTGCTTTTAGAATCAGGGGCTAGTGTTTTCTCAAAGGACAGATGGGGAAACACCCCGCTTGATGAAGGCAGAATTTGTGGAAACAGGAATATGCTTAAGCTTTTGGAAGAGGCAAAAGCTTCACAGTTATCAGAATCTCCTTATTCCTCTCGAGAATTCACAGACAAAAAGCACTCGAAGAAATGTACAGTGTTCCCTTTCCACCCATGGGATCCTGAAGAAAACAAAAGACCTGGAATTGTGCTATGGGTTCCAATCACTATTGAAGAGCTCATCAAAGAATCATCAGAGCAGCTACAAGTTTCAGGTGAATGTTGTATATTATCAGAAGATGGAGGTAAAATTCTTGATGTCCATATGATTGATGAAAGTCAAAAGCTGTATCTAGTTTCTGAAACTCATTAATGAGGTCAATTGGTTATTGTTGTGTGCAAAATAAAAATTTTATAGTTAGGCCATTCTTCACCTTGGCTATGTTGTCAATTTACAGATGAGTGTAAATATAATGTTGATGAAAAATGGGAGCCTTGGTAGGTATTCCCTTCTCCTGTGCAATAGTTTTTGGGCTCCCATTGCCAACACTTGTTGTTCTGAATTGACCAAAAGGAAGATTAGAAAAGAATGGCCTAAGTTCTCTTGAAAAAAAAAATGTCATTACCTGAGAATGAAAGAAAGCATACACAAATTGCTGTTATGTGGTTGAAGCAGGGATACTTTATGCTGAATAACATTATCTTGCAAGCAATGAAGCAATATC 3228 39.47 MAVSGGREEEEGSRRLDSSSSEEEYNVESVRERITSSRGSRFNLIQKQLRIDRNSRRFSRENLINGIKCLVILPDSRWYRAWTKFILIWAVYSSFFTPMEFGFFRGLPENLFILDIVGQIAFLLDIVFQFFLAYRDPQTYRMVYKRTPIALKYLKSTFVTDLLSCMPWDIIYKACGRREEVRYLLWIRLFRVRKIDAFFKTMEKDIRINYMFTRIVKLLVVELYCTHTAACIFYYLATTLPASEEGYTWIGSLKLGDYSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMVLGAYLIGNMTALIVKGSKTVKFRDKMADVMKYMNRNRLSREIRDQIKGHLRLQYESSYTEATVLQDIPISIRAKISQSLYLPYIQNVSLFRGCSPEFINQIVIRLHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGIGQDGSEETIDLLQPNSSFGEISILCNIPQPYTVRVCELCRLLRLDKQSFTNILDIYFYDGRKILNNLLEGKETNLRVKQLESDITFHIGKQEAELALKVNSAAYHGDLYQLKGLVRAGADPNKTDYDGRSPLHLAASRGFEDIVVFLIQDGVNIDLTDNFGNTPLMEAIKNGNDQVAVLLSKQGASLKVENPGSFLCTAVSRGDSDLLKRLLCYGIDPNSKDYDFRTPLHIAASEGLTLMAKLLLESGASVFSKDRWGNTPLDEGRICGNRNMLKLLEEAKASQLSESPYSSREFTDKKHSKKCTVFPFHPWDPEENKRPGIVLWVPITIEELIKESSEQLQVSGECCILSEDGGKILDVHMIDESQKLYLVSETH 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 38481980 38492412 + XM_039020267.1 Bhi12g01270 53082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01270 826 ProSiteProfiles cAMP/cGMP binding motif profile. 400 520 IPR000595 -
Bhi12g01270 826 SMART cnmp_10 400 518 IPR000595 -
Bhi12g01270 826 SMART ANK_2a 674 703 IPR002110 GO:0005515
Bhi12g01270 826 SMART ANK_2a 577 606 IPR002110 GO:0005515
Bhi12g01270 826 SMART ANK_2a 707 736 IPR002110 GO:0005515
Bhi12g01270 826 SMART ANK_2a 641 670 IPR002110 GO:0005515
Bhi12g01270 826 SMART ANK_2a 610 639 IPR002110 GO:0005515
Bhi12g01270 826 SUPERFAMILY Voltage-gated potassium channels 74 325 - -
Bhi12g01270 826 PANTHER POTASSIUM CHANNEL SKOR-LIKE 14 825 - -
Bhi12g01270 826 MobiDBLite consensus disorder prediction 7 28 - -
Bhi12g01270 826 MobiDBLite consensus disorder prediction 1 28 - -
Bhi12g01270 826 Pfam Cyclic nucleotide-binding domain 420 504 IPR000595 -
Bhi12g01270 826 ProSiteProfiles Ankyrin repeat region circular profile. 674 706 - -
Bhi12g01270 826 Gene3D - 82 326 - -
Bhi12g01270 826 ProSiteProfiles Ankyrin repeat region circular profile. 577 609 - -
Bhi12g01270 826 PRINTS EAG/ELK/ERG potassium channel family signature 115 125 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi12g01270 826 PRINTS EAG/ELK/ERG potassium channel family signature 224 234 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi12g01270 826 PRINTS EAG/ELK/ERG potassium channel family signature 272 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi12g01270 826 PRINTS EAG/ELK/ERG potassium channel family signature 316 325 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bhi12g01270 826 ProSiteProfiles KHA domain profile. 753 826 IPR021789 -
Bhi12g01270 826 Gene3D Jelly Rolls 384 524 IPR014710 -
Bhi12g01270 826 PRINTS Ankyrin repeat signature 578 593 IPR002110 GO:0005515
Bhi12g01270 826 PRINTS Ankyrin repeat signature 690 704 IPR002110 GO:0005515
Bhi12g01270 826 Gene3D - 534 642 IPR036770 -
Bhi12g01270 826 ProSiteProfiles Ankyrin repeat profile. 674 706 IPR002110 GO:0005515
Bhi12g01270 826 Pfam Ion transport protein 80 325 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bhi12g01270 826 ProSiteProfiles Ankyrin repeat profile. 610 642 IPR002110 GO:0005515
Bhi12g01270 826 ProSiteProfiles Ankyrin repeat profile. 577 609 IPR002110 GO:0005515
Bhi12g01270 826 SUPERFAMILY cAMP-binding domain-like 328 518 IPR018490 -
Bhi12g01270 826 ProSiteProfiles Ankyrin repeat region circular profile. 610 641 - -
Bhi12g01270 826 CDD CAP_ED 400 514 IPR000595 -
Bhi12g01270 826 PANTHER POTASSIUM CHANNEL AKT1 14 825 IPR045319 GO:0005249|GO:0006813
Bhi12g01270 826 Gene3D - 643 738 IPR036770 -
Bhi12g01270 826 Pfam Ankyrin repeats (3 copies) 647 728 IPR002110 GO:0005515
Bhi12g01270 826 Pfam Ankyrin repeats (3 copies) 552 639 IPR002110 GO:0005515
Bhi12g01270 826 SUPERFAMILY Ankyrin repeat 549 729 IPR036770 -
Bhi12g01270 826 Pfam KHA, dimerisation domain of potassium ion channel 752 821 IPR021789 -
Bhi12g01270 826 Gene3D Helix hairpin bin 327 383 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02311 Bhi-Chr9:63966253 Bhi12g01270 Bhi-Chr12:38481980 1.42E-90 dispersed
Bhi09g02312 Bhi-Chr9:63966253 Bhi12g01270 Bhi-Chr12:38481980 1.31E-90 dispersed
Bhi12g01270 Bhi-Chr12:38481980 Bhi08g02137 Bhi-Chr8:61444107 5.36E-12 dispersed
Bhi12g01270 Bhi-Chr12:38481980 Bhi12g01271 Bhi-Chr12:38481981 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01270 K21867 - csv:101210912 1561.2