Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01357 TTTATTTAAAAAAGAGCATTGAGTAATTGCTATATATATTCCATCCCCCTGAGACCCTCAATTTCCATTCATTTCACTCCTAACCCCAAATCTCTCTCTTATTTTCTTTTTCTTCCATTTCTCTCTTAAATCAACCAACAATTCCAATGGACGCAAGCTCTATAGACGAAAGCACCGCCAGTGACTCCACCTCCGTTTCTCCCGTCACCCCATTACTCTTCCACTCATCGCCGTCGCCTACGGCGGAAGCAGAATCCCGTAAACTTCCATCTTCTCGTTTCAAAGGAGTCGTCCCTCAGCCCAACGGCCGCTGGGGCGCTCAGATTTACGAGAAACACCAAAGAGTATGGCTCGGCACTTTCAACCAAGAACACGACGCCGCCAAGGCTTACGACATCGCCGCCCTCCGCTTCCGCGGCCGCGACGCTGTCACCAACTTTAAACCTCTCCGCCACGACGACAACGCCGCCGTGGAAGCCGACTTTCTCAACTCCCACTCCAAGCTCGAGATCGTCGACATGCTCCGCAAACACACTTACAATGACGAACTCCAGCAAAGCAAGCGCCACCGGGGAGCCACGGCGGCGACGGCGGATTCAGCCTCCGGGTCGTTCCCCAATTACTCCGGGTCAGATTCGAATCGGGAAGTTCTGTTTGAGAAAACCGTGACGCCGAGTGACGTGGGGAAGTTGAACCGGCTGGTGATTCCGAAGCAGCACGCGGAGAAGAATTTCCCGATGGGAGACGGCGTTGTTTCCGGGAAAGGAATGCTTTTAAACTTCGAGGATATGGGAGGGAAGGTTTGGCGGTTCCGGTACTCGTATTGGAACAGCAGCCAGAGCTATGTGTTGACTAAAGGCTGGAGCCGGTTCGTTAAAGACAACACTCTCCGAGCCGGAGATGTGGTTCGGTTCCTCCGTTCTACTGGACCGGATAAACAGCTTTACATTCATGCTAACCCAACCCCTGGACCGGGAATTAACCCGGTTCATGTTGTGAAGCTTTTTGGAGTCAATATTTTGCAATTGCCTGTGGGGAAAAACACTACTAAAACAGAAGGGGTATTCTTGGAATTACATCCTACCAAGAAGCAAAGAATAATCAAACCTTTGTAACATATAATCAATGTATCTTTTTTGTTTTTACGTAGTTGCTGCAACCTGACTTGTATTAACCCTAAAAAGACAAGATGACAACACATTTCTTTTTCTTTTT 1215 49.05 MDASSIDESTASDSTSVSPVTPLLFHSSPSPTAEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNQEHDAAKAYDIAALRFRGRDAVTNFKPLRHDDNAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRHRGATAATADSASGSFPNYSGSDSNREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMGDGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPGINPVHVVKLFGVNILQLPVGKNTTKTEGVFLELHPTKKQRIIKPL 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 41432376 41433590 + XM_039050683.1 Bhi12g01357 53169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01357 322 MobiDBLite consensus disorder prediction 1 37 - -
Bhi12g01357 322 Gene3D AP2/ERF domain 43 100 IPR036955 GO:0003700|GO:0006355
Bhi12g01357 322 Gene3D - 159 275 IPR015300 -
Bhi12g01357 322 MobiDBLite consensus disorder prediction 135 161 - -
Bhi12g01357 322 MobiDBLite consensus disorder prediction 141 161 - -
Bhi12g01357 322 MobiDBLite consensus disorder prediction 1 51 - -
Bhi12g01357 322 CDD AP2 43 98 IPR001471 GO:0003700|GO:0006355
Bhi12g01357 322 CDD B3_DNA 169 269 IPR003340 GO:0003677
Bhi12g01357 322 SUPERFAMILY DNA-binding pseudobarrel domain 167 268 IPR015300 -
Bhi12g01357 322 SMART rav1_2 44 105 IPR001471 GO:0003700|GO:0006355
Bhi12g01357 322 SMART B3_2 170 272 IPR003340 GO:0003677
Bhi12g01357 322 PANTHER AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR TEM1 28 302 - -
Bhi12g01357 322 Pfam B3 DNA binding domain 170 268 IPR003340 GO:0003677
Bhi12g01357 322 ProSiteProfiles AP2/ERF domain profile. 44 99 IPR001471 GO:0003700|GO:0006355
Bhi12g01357 322 Pfam AP2 domain 44 91 IPR001471 GO:0003700|GO:0006355
Bhi12g01357 322 SUPERFAMILY DNA-binding domain 43 99 IPR016177 GO:0003677
Bhi12g01357 322 ProSiteProfiles B3 DNA-binding domain profile. 170 274 IPR003340 GO:0003677
Bhi12g01357 322 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 28 302 IPR044800 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01368 Bhi-Chr7:41285107 Bhi12g01357 Bhi-Chr12:41432376 6.38E-137 dispersed
Bhi12g02268 Bhi-Chr12:72711789 Bhi12g01357 Bhi-Chr12:41432376 5.25E-41 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2669 PF02362 B3 6.40E-28 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01357 K09287 - csv:101206328 563.918