Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01374 CCCACCTATCTACTCTATCTCTTTCTCTCTCCCAATTTCTCTCTCGTAGGTTCTTAATTATAATCATTTCAAAGAGAAGAGATGCAGCAAAGTTGGAAGTTGAGTTGCATATCATCAAGTGAAAGCGCTTGTTTGGAAGGTGATGAAGAAGGAGAAGAATCAATTTTCCTTTCCCTTTCCCCACCAGGCCAACGCCATTCTTTCTCTTCAAAACAACACCAATCTTCTCTTCAAAACCCTAATCACCAAAATGCAGCCGTCGCCGTCACCGTCGCCATGCACATTGGCCCTCCACCCGCCCTCTCCTCCTCCTCCACCCCCGCCGTCCGCCCCCTTGACGCCGCCCACTACTGGATCCCTACGCCTGCCCAAATCCTCGTTGGTCCCACCCAGTTCTCCTGCTCTGTCTGCACTAAAACCTTCAACAGATACAACAACATGCAGATGCACATGTGGGGTCATGGATCAGAGTACAGAAAAGGGCCAGAATCATTAAGAGGATCAAAGCCAGCTTCGTCAATGCTTAGGCTTCCATGCTATTGCTGTGCAGAAGGGTGCAAGAACAACATAGAGCATCCAAGGTCAAGGCCATTGAAGGATTTCAGGACTCTTCAAACCCATTACAAGAGAAAGCATGGGGCAAAGCCTTTCAGTTGTAGGAAATGTGGGAAGCCATTTGCTGTAAGAGGGGATTGGAGGACACATGAGAAGAACTGTGGAAAGCTTTGGTTTTGTATTTGTGGCTCTGATTTTAAACATAAAAGATCTCTTAAAGACCATGTTAGAGCCTTTGGAGATGGCCATGCACCTCACACTGTTCAACTTTGTGAGGTTGAAGATGATGATGATTGGGATGATCATGATGACACAGATCATCAACATGTAAATGGACCTCAAGGCTGGTCTATTTATCATTAACTTTTTTTTTCCCCTTCTTGAACTTCTTAAATTAACTTACTATTTTGTT 967 45.09 MQQSWKLSCISSSESACLEGDEEGEESIFLSLSPPGQRHSFSSKQHQSSLQNPNHQNAAVAVTVAMHIGPPPALSSSSTPAVRPLDAAHYWIPTPAQILVGPTQFSCSVCTKTFNRYNNMQMHMWGHGSEYRKGPESLRGSKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFSCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVQLCEVEDDDDWDDHDDTDHQHVNGPQGWSIYH 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 43202260 43203533 - XM_039019995.1 Bhi12g01374 53186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01374 278 Gene3D Classic Zinc Finger 149 236 - -
Bhi12g01374 278 PANTHER ZINC FINGER PROTEIN WIP6 1 266 - -
Bhi12g01374 278 ProSiteProfiles Zinc finger C2H2 type domain profile. 105 132 IPR013087 -
Bhi12g01374 278 MobiDBLite consensus disorder prediction 258 278 - -
Bhi12g01374 278 ProSitePatterns Zinc finger C2H2 type domain signature. 107 127 IPR013087 -
Bhi12g01374 278 Gene3D Classic Zinc Finger 104 127 - -
Bhi12g01374 278 SMART c2h2final6 153 185 IPR013087 -
Bhi12g01374 278 SMART c2h2final6 105 127 IPR013087 -
Bhi12g01374 278 SMART c2h2final6 190 210 IPR013087 -
Bhi12g01374 278 PANTHER ZINC FINGER PROTEIN WIP2 1 266 IPR043584 GO:0003700|GO:0010468
Bhi12g01374 278 SUPERFAMILY beta-beta-alpha zinc fingers 173 210 IPR036236 -
Bhi12g01374 278 MobiDBLite consensus disorder prediction 33 54 - -
Bhi12g01374 278 SUPERFAMILY beta-beta-alpha zinc fingers 100 128 IPR036236 -
Bhi12g01374 278 Pfam Zinc finger, C2H2 type 105 124 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01582 Bhi-Chr9:42615796 Bhi12g01374 Bhi-Chr12:43202260 1.62E-27 dispersed
Bhi09g01583 Bhi-Chr9:42615796 Bhi12g01374 Bhi-Chr12:43202260 1.62E-27 dispersed
Bhi11g02674 Bhi-Chr11:71997724 Bhi12g01374 Bhi-Chr12:43202260 2.32E-101 dispersed
Bhi12g01374 Bhi-Chr12:43202260 Bhi03g01682 Bhi-Chr3:35372763 1.99E-22 dispersed
Bhi12g01374 Bhi-Chr12:43202260 Bhi10g00326 Bhi-Chr10:7041205 1.27E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2670 PF00096 zf-C2H2 0.0089 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01374 - - csv:101216722 501.901