Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01423 AGTATTTATTTAGTATTTATTAGAGAAAAAAGAAGAAAAATTTAAGATGAAGAGTTGGAAAATGGGAATTAGCGTAGGTGTTCCCAACTTTCGAGAGGAGTGTTGAGAGCCATGAATTTGGCTGCCCCCCACCTCTCCTCTGTGCGTCTTCTTTCTTCTCTCCTTTCCTCTTAGCTTTTCCCTTTTGCTTTATAAACTCATTTCCACACTCCCCTCATTCATGTGATACAAAAATAATACCCAACCCACGCATTTCTCTCTCTCTCTCTTTCCCTCCGATCATGCTGCCACTTGAGCAAGATACAACCACCACCACCGCCACCACCGCAATCTCCCATCCCCGCCCCGACATCCTCATCCATGCCGTCCCCTCCGCCTCCGACACATTTTCCATTCTTCGCCAATCCCGATTCTCTCTTACTCTTAAGTTTGAAGACGTATCGTATAGCATCAAACTCCAAACTTCCAAAAGAAGCTGTTTAAGTTTAAGGAATGAGTCCCAAAGCAACACTACTCGGACTATACTGAATGGAGTTAGTGGAGTGGTTCGCTCCGGAGAGCTTCTCGCAATGCTGGGCACCTCCGGCAGTGGCAAAACCACTCTTCTAACGGCCTTGGCTGCCCGTTTGCCGGGAAAAATCTCCGGCGCCATTACTTACAACGACAAACCCTTTTCCAGCTCCATGAAGCGAAAAATCGGCTTCGTTTCGCAAGACGACGTTCTTTACCCTCATCTCACCGTCCTTGAGACTCTCACTTATGCCGCCATGCTCCGGCTGCCCAAGGAGCTGAGTCGAGACGAGAAAGTTGCACAGGCGGAGACCATCATTGTGGAGCTAGGCCTCACGCGCTGCCGCAACAGTGTCGTCGGCGGCGGACTTCTCAGGGGGATCTCAGGCGGGGAGAGGAAACGGGTTAGTATTGGTCACGAGATGATTGTGAACCCGAGCTTGCTTTTATTGGATGAACCCACTTCTGGGCTGGACTCCACTACGGCCCAGCGGATTGTAGCCACGTTGAGAGGATTGGCTCGTGGTGGTCGGACCCTGGTTATGACCATTCACCAACCCTCTACACGTTTGTATAGTATGTTTGATAAGGTGGTGGTGTTGTCCGATGGCTCCCCCATTTACAGTGGCCCCGCGGCTCGGGTCATGCCTTATTTTGAGTCCATTGGTTATGTTCCTCCTTTCAATCTCATCAATCCTGCTGATTTTCTCCTCGATCTTGCCAATGGCATAGTGCCAGATTCAGTTCGCGAAGATCAAGTGGAGCATTTTCATGGCGGATCATTGGACCATCAAGATGATCAAAATTCCGTCAAGCAGTCTCTCATTGCTTCCTTCAGAAAGAACCTTTACCCCGAACTCAAAGCTGAGATTCTCAACAAAACCAACTTCTCCACCGTTGATTCAAGAACCGACACTCCAAGAGGGAGAAGAGAAAATGAATGGATGACAAACTGGTGGGAGCAGTTTAGCATATTACTGAAAAGGGGATTAAGAGAAAGGAGACACGAATCATATTCAGGGTTGAGGATTTTCCAAGTGATGTCAGTTTCATTTCTTTCAGGACTTTTATGGTGGCACTCTGATCCTTCGCATATACAGGATCAAGTTGGTTTAATCTTCTTCTTCTCAATCTTCTGGGGTTTCTTCCCATTATTCAACGCCATATTTGCATTCCCGCTAGAACGACCAATGCTAAACAAAGAACGCTCCTCTGGAATGTACCGTCTGTCATCGTATTACATGGCTCGAACCGCCGGGGATTTACCAATGGAGTTAGTTCTTCCCACCGTTTTCGTGACGGTCACGTACTGGATGGGGGGCCTAAACCCTTCGCTGATCCCATTTCTGCTCACGCTTTTGGTTGTTCTGTTGAACGTGCTGGTGTCGCAGGGCCTCGGCTTGGCTCTGGGCGCCATTTTGATGGAAGTAAAACAAGCCACCACGCTCGCATCAGTCACTATGCTTGTGTTTCTTCTAGTGGGTGGGTACTATATTCAGCACATTCCTCCTTTTATTTCTTGGCTTAAGTTTGTGTCCTTTAGCCATTATTGCTACAGGCTTTTGGTGGGAATTCAGTACGAGTCCGTCAATAAGTTGTATGACTGCGCCACTTCATTTGGGCTGCATGGTGGTTACTGCAGACTGGGGGATTTTCCTGCTGTTAAATGTTTGGGGATTGGGAATCATAGTTTGTGGTGGGATGTGGCTGCTTTGGCTCTTATGTTGTTTGGGTATAGGATTTTGGCTTTTCTTGCTTTGAAAATGGCACATTGATCTCACTGATTTTCCCTTTTTTCTGACCATCACAACATTGGGACAAGGAACTGCTGAGATTTTTTTTTTCCGACTCAAATTGGGGACTGAGAGACTTAGTTCATTGTGTTCTTTTAGACTGGCTAAGGGAAAATTGTAAGTTGCATACTACATTCATGTATTTCCTTTCCTAATGTAACATTTTACTCTGGGAAGAGTTGGAAATATGTATGTATATTGAAGGATGAATTGATAAATTAATGAATCTGCACAATTAAATTGTGCAATTGTTGTTTGGAATGTT 2568 46.18 MLPLEQDTTTTTATTAISHPRPDILIHAVPSASDTFSILRQSRFSLTLKFEDVSYSIKLQTSKRSCLSLRNESQSNTTRTILNGVSGVVRSGELLAMLGTSGSGKTTLLTALAARLPGKISGAITYNDKPFSSSMKRKIGFVSQDDVLYPHLTVLETLTYAAMLRLPKELSRDEKVAQAETIIVELGLTRCRNSVVGGGLLRGISGGERKRVSIGHEMIVNPSLLLLDEPTSGLDSTTAQRIVATLRGLARGGRTLVMTIHQPSTRLYSMFDKVVVLSDGSPIYSGPAARVMPYFESIGYVPPFNLINPADFLLDLANGIVPDSVREDQVEHFHGGSLDHQDDQNSVKQSLIASFRKNLYPELKAEILNKTNFSTVDSRTDTPRGRRENEWMTNWWEQFSILLKRGLRERRHESYSGLRIFQVMSVSFLSGLLWWHSDPSHIQDQVGLIFFFSIFWGFFPLFNAIFAFPLERPMLNKERSSGMYRLSSYYMARTAGDLPMELVLPTVFVTVTYWMGGLNPSLIPFLLTLLVVLLNVLVSQGLGLALGAILMEVKQATTLASVTMLVFLLVGGYYIQHIPPFISWLKFVSFSHYCYRLLVGIQYESVNKLYDCATSFGLHGGYCRLGDFPAVKCLGIGNHSLWWDVAALALMLFGYRILAFLALKMAH 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 45603737 45606719 + XM_039020362.1 Bhi12g01423 53235

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01423 667 Pfam ABC transporter 82 232 IPR003439 GO:0005524
Bhi12g01423 667 Pfam ABC-2 type transporter 397 603 IPR013525 GO:0016020|GO:0140359
Bhi12g01423 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 665 - -
Bhi12g01423 667 Pfam ABC-2 type transporter 261 326 IPR043926 GO:0140359
Bhi12g01423 667 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 304 IPR003439 GO:0005524
Bhi12g01423 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 300 IPR027417 -
Bhi12g01423 667 Gene3D - 65 297 IPR027417 -
Bhi12g01423 667 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 28 665 - -
Bhi12g01423 667 SMART AAA_5 91 281 IPR003593 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01423 K05681 ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2 - csv:101209031 1082.01
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03019 Bhi-Chr1:75320762 Bhi12g01423 Bhi-Chr12:45603737 0 dispersed
Bhi07g01234 Bhi-Chr7:38869910 Bhi12g01423 Bhi-Chr12:45603737 1.01E-86 dispersed
Bhi09g01524 Bhi-Chr9:40484192 Bhi12g01423 Bhi-Chr12:45603737 0 dispersed
Bhi11g00757 Bhi-Chr11:20104862 Bhi12g01423 Bhi-Chr12:45603737 0 dispersed
Bhi11g00758 Bhi-Chr11:20148906 Bhi12g01423 Bhi-Chr12:45603737 0 dispersed
Bhi11g02456 Bhi-Chr11:66635580 Bhi12g01423 Bhi-Chr12:45603737 0 dispersed
Bhi11g02457 Bhi-Chr11:66635580 Bhi12g01423 Bhi-Chr12:45603737 0 dispersed
Bhi12g01422 Bhi-Chr12:45603722 Bhi12g01423 Bhi-Chr12:45603737 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g240 . Blo16g01044 . . Bpe13g01320 . . . Cmo04g01619 . . . Car04g01598 . . . Cpe01g01375 . . . . . . . . . . . . . . Cone13ag0868 . Cone6ag0480 . . . . . . . . . . . . Bma06g00780 . . . . Cma15g01421 . . Cpe13g00026 . Bhi12g01423 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001139 3 3 3 3 3 2 2 2 2 2 2 2 4 2 2 4 2 5 4 2 2 2 2 3 3 1 3 3 3 3 79