Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01491 GCATTTTACCGCTGAAATATCAAGACCATTTTTGTTCTAAGAGAAAGGCAACGCCAATTCATCACATTTCCCATTAGACAAGCAACCCGAAAGAACACGGATCGATAGGCGGAAGGAAGAATCCAATCCGCCGATTTGCTGCAAGGGTTTCGATTCGGATCCAAGAAATTGATATCATCAATGGCGGGCCTATCGCTCAAGTGTGGGGATTGTGGCGCACTCTTGAGATCCGTAGAAGAAGCTCAACAACATGCCGAACTCACTTCTCACTCCAACTTCTCCGAGTCCACCGAAGCCGTGCTTAATCTCGTCTGCACTGCTTGCGGCAAGCCCTGCCGATCCAAGACGGAAAGTGATTTGCACACGAAAAGGACTGGCCATACCGAGTTTGCTGATAAGACTTTGGAGGCTGCAAAACCAATAAGTTTGGAGGCCCCAAAGGTAGATGCGGAATCAGAAGATGCTGGGGATGCAAGTGCTAGCAAGTCTGAAGAAATGGTTGTGCCAGAGGTGAACAAGAATATATTAGAGGAACTTGAAGCTATGGGCTTTCCAACAGCTCGAGCAACCCGTGCACTCTTTTATTCTGGTAATGCCAGTCTTGAGGCTGCAGTCAATTGGGTAGTCGAACATGAGAATGATCCGGAGATAGATGAGATGCCTTTGGTTCCTAAAGACACAAAGGTTGAGGCTCCAAAGCCTTCTCTTACACCTGAGCAATTGAAAGCAAAACAGCAGGAGCTAAGGGAACGGGCTCGGAAGAAAAAAGAGGAGGAAGAGAAGATAGCAGAGAGAGAAAGGGAAAAGGAGAGAATTCGAATTGGCAAGGAGCTCTTAGAAGCAAAAAGGATCGAGGAAGAAAATGAGAGAAAAAGAATATTAGCTTTGAGAAAAGCTGAAAAAGAAGAAGAAAAAAGAGCCAGAGACAAAATTCGTCAAAAACTTGAAGATGACAAGGCAGAAAGAAGACGAAGGCTTGGATTGCCACCAGAAGATCCTTCAACTGCAAAACCTCCGGCACCTGTTGTTGAAGAGAAAAAGCTCTCATTACCCGTTAGACCTGCTTCAAAGGCAGAGCAAATGAGAGAATGTTTGCGATCATTAAAGTCCAATCACAAGGAGGATGATGCTAAAGTGAAGAGAGCATTTCAAACCCTTCTAACGTATGTGGGAAACGTGGTAAAAAATCCTGATGAAGAGAAGTTCAGAAAAATTAGACTTAGCAACCAAACTTTCCAGGATAGAGTGGGTGCACTGAGAGGAGGAATTGAGTTTCTAGAGCTGTGTGGGTTCGAGAAAATTGAAGGTGGTGAGTTCTTATTTTTGCCCAGAAACAAGGTTGATAGGGCAGTGCTCAATTCAGCTGGCTGTGAGCTCGACTCTGCTATAAAGAATCCCTTCTTTGGTGTTCTCTAATTTCATGTTACAGAGAAATATTTTAGTAATTTGTTTTTTGGGTGCTGTTTGGAATATGGTCCAGATTGATGTTGATATTTTGTTCTTTCATGACACTGTACATGAAGAAATATTTAGTGCATTTACCCACTGGAACAGCATATTGTTTGTTTTGGTGATGTCTTCTCTGCAATTAGTGTCTTTTTGAATCT 1607 43.31 MAGLSLKCGDCGALLRSVEEAQQHAELTSHSNFSESTEAVLNLVCTACGKPCRSKTESDLHTKRTGHTEFADKTLEAAKPISLEAPKVDAESEDAGDASASKSEEMVVPEVNKNILEELEAMGFPTARATRALFYSGNASLEAAVNWVVEHENDPEIDEMPLVPKDTKVEAPKPSLTPEQLKAKQQELRERARKKKEEEEKIAEREREKERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRARDKIRQKLEDDKAERRRRLGLPPEDPSTAKPPAPVVEEKKLSLPVRPASKAEQMRECLRSLKSNHKEDDAKVKRAFQTLLTYVGNVVKNPDEEKFRKIRLSNQTFQDRVGALRGGIEFLELCGFEKIEGGEFLFLPRNKVDRAVLNSAGCELDSAIKNPFFGVL 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 48241698 48257878 - XM_039018567.1 Bhi12g01491 53303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01491 411 Gene3D - 303 399 - -
Bhi12g01491 411 SMART PGNneu 321 384 - -
Bhi12g01491 411 MobiDBLite consensus disorder prediction 239 281 - -
Bhi12g01491 411 SUPERFAMILY PUG domain-like 297 407 IPR036339 -
Bhi12g01491 411 PANTHER F13M7.16 PROTEIN 1 411 - -
Bhi12g01491 411 SUPERFAMILY UBA-like 95 164 IPR009060 GO:0005515
Bhi12g01491 411 Coils Coil 181 215 - -
Bhi12g01491 411 CDD PUB_UBA_plant 305 411 - -
Bhi12g01491 411 MobiDBLite consensus disorder prediction 167 208 - -
Bhi12g01491 411 PANTHER F13M7.16 PROTEIN 1 411 - -
Bhi12g01491 411 MobiDBLite consensus disorder prediction 239 270 - -
Bhi12g01491 411 Pfam UBA/TS-N domain 116 147 IPR015940 -
Bhi12g01491 411 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 110 151 IPR015940 -
Bhi12g01491 411 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Bhi12g01491 411 Gene3D - 113 157 - -
Bhi12g01491 411 MobiDBLite consensus disorder prediction 82 106 - -
Bhi12g01491 411 SMART uba_6 112 150 IPR015940 -
Bhi12g01491 411 Coils Coil 224 261 - -
Bhi12g01491 411 CDD UBA_PUB_plant 110 158 - -
Bhi12g01491 411 ProSitePatterns Zinc finger C2H2 type domain signature. 45 67 IPR013087 -
Bhi12g01491 411 MobiDBLite consensus disorder prediction 183 208 - -
Bhi12g01491 411 MobiDBLite consensus disorder prediction 86 100 - -
Bhi12g01491 411 Pfam PUB domain 318 389 IPR018997 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01297 Bhi-Chr6:39331855 Bhi12g01491 Bhi-Chr12:48241698 1.92E-100 dispersed
Bhi06g01298 Bhi-Chr6:39331870 Bhi12g01491 Bhi-Chr12:48241698 1.92E-100 dispersed
Bhi10g01044 Bhi-Chr10:20982572 Bhi12g01491 Bhi-Chr12:48241698 6.12E-06 dispersed
Bhi12g00933 Bhi-Chr12:28171478 Bhi12g01491 Bhi-Chr12:48241698 1.04E-07 dispersed
Bhi12g01491 Bhi-Chr12:48241698 Bhi09g01982 Bhi-Chr9:55472404 7.84E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01491 K24348 - csv:101215434 692.189