Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01498 AAGCTGAAAGTAGGATGTCATTGTGTGTTTCCACACAAGCCATTCCATCCCAAACCCTCTGTTTCTTTTTCCTTTCCCAAATGGCCACACTTGTTTTCTCCCACTCCTTCCTCCTCTTCTTTTTCCTCATCGGAACCTCCGCCGTTGACGGCGCGTACTGGTGCGTGGCCCGTAGCGACGCCAGCTACGAAGCCCTCCAAGCCGCCCTCGACTACGCCTGCGCCACCGGCGCCGACTGTAATCCCATTCTGTTGAACGGACTCTGTTTCCTCCCCAACACCATCCAAGCCCACGCCTCCTACGCCTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCTCCCGGCTCCTGTGACTTCGCCGGCTCCGCCACCATCGCCCAGAGCGACCCAAGTTATGGATCTTGTGTTTATCCATCTTCCACGAGTGCTGCAGGAGGAGCAATCACACCGAGCCCTCCCACAAACACAAGCCCGACAATAACGGTGCCAGCTACAACCACACCAAGCTTCAACAATGGTGGTACCAGTGACACGAATGGACTAAATCCAGTATACAATCCGACATCAACCTCGTCTCCAACCAACTCGAGAGCGTCTTCGAGTTTTACGGTCCCGAAACTCTTAGTCTTAGTCTTGTTTTCAATTGCTATCTCACTCCCTTCATAAACAATGTAGGAGGGCTATAGATGGGGTGGGAATGTGCAGAGGGTTTATTCAGTTTTGTTAGAAATGGTGAGGCTTCCAAAGGTTTGATCAAATGTAGTTTTTATTTGGATGTTTTAAAACCTTTTTTTTTTTTTTTGGTGAAAACTAAATGACATAGGTAAAATCAGGTAGGTTTAGTTAAGGTTTCACAAGTCTCCCACTTTCTTTAGGGGATTTACCCATTCAATTCAATGGTTTAATTTGATTCTTGTACTTGACTATGTACATGACTAACTTCTAGTTTTGAAGGTTCAACTATTGAGTTCAATTTCTCCA 980 47.14 MSLCVSTQAIPSQTLCFFFLSQMATLVFSHSFLLFFFLIGTSAVDGAYWCVARSDASYEALQAALDYACATGADCNPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPSSTSAAGGAITPSPPTNTSPTITVPATTTPSFNNGGTSDTNGLNPVYNPTSTSSPTNSRASSSFTVPKLLVLVLFSIAISLPS 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 48354637 48358962 - XM_039019907.1 Bhi12g01498 53310

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01498 216 PANTHER BETA-1,3 GLUCANASE 32 205 IPR044788 -
Bhi12g01498 216 SMART X8_cls 48 132 IPR012946 -
Bhi12g01498 216 Gene3D - 42 139 - -
Bhi12g01498 216 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 32 205 - -
Bhi12g01498 216 MobiDBLite consensus disorder prediction 162 194 - -
Bhi12g01498 216 Pfam X8 domain 49 119 IPR012946 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01498 - - - csv:101214469 308.916
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01093 Bhi-Chr8:35224299 Bhi12g01498 Bhi-Chr12:48354637 9.92E-36 dispersed
Bhi12g01498 Bhi-Chr12:48354637 Bhi11g00586 Bhi-Chr11:13350685 4.95E-27 dispersed
Bhi12g01498 Bhi-Chr12:48354637 Bhi08g01092 Bhi-Chr8:35224299 1.96E-31 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g906 . Blo12g00115 Bda03g01126 . . . Bma04g01055 . Cmo08g00991 . . . . . . . . . . . . . . . Cla06g00760 . Cec06g0822 . Clacu06g0812 Cmu06g0786 . . . . . . . Chy05g00560 . . . . . . . . . Sed04g2068 . . Cma08g01021 . Car08g00898 . . Cpe17g00255 Bhi12g01498 Tan06g2300 Cmetu05g0712 Lac12g2044 Hepe03g0359 . Lcy13g0466 . . . . . . . Lsi09g01139 . . Cme05g00718
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009076 1 1 1 1 0 1 1 1 1 1 2 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 34