Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01502 CTTTCTTCTTGATTTGTGATTTTCAATGTGGGGTTTCTTTATTTTAATGAATGGAGGGTGCATTGGGGCATAACCCCACCTTCGAACCCAAAAGTCCATTTACTCATTCATAATAGCCATCTCTTTTGGATTTCCCATTTCTTGATTTTGGGATTTTGAATATTTTTGTTTAATGGGGTTCTTTGAAAAATTTGCAACTTTTGAAATCTGATTTTGTGTCAGATAATGGGGAAATAGATAGGGAGAAGAAGAAGGAAATGAACTTTTTGGCTTTGTCAATTTAGAGGAGACAATTGTTTAATACCCATTAGATATCTTTGGAATGTCAGGGAAAGGTCCATAGCTTTGTACTAGGCCTGAAAACTTTCCCAGCGAGAGAGATTTATTGCAATGGCCTAAAATGGGAGGCTCATCTCATCACCTCTTTTGCTAGCCTCTGTAGGAAAAAGGGTCTGGCTTCTGGGTAGTTCTTTGGGTTCAGCCCCTTGGTTCTCTTAGAGGAATTCATGGCTGTGACAGCTTTGCTGTACCATTTTCTTTTTTGGGTCTTTGAATCTCTACCTTATTACTGGGAGTTATTTCATCTGTTCAGTTACAATGCTTGTATGCTACATAAAAGGAATTGTGGANAAGATTTTCTTGCTGACTGGAGGAGACGAATCAAGGGAGAGGGCTTTCTGGTTTTCCAAGACAAATCTATGTATAAAGTTCATTGGTTGATGATAGAAGAGGAAAGAACAGAGGCAAGCTGGGGTATTAGGAAGGAGTTGACCATGGCATCGACTTCTTTTGCTGGCGGGAAGCAACTGCCAGCAATTGAAGTGTCTTCTAACTGTGTTCCATACCCACCACCGCAAACAACATATGATGATATCGTAGCCAATCCGAAGATCTTTATGACATCCTTGGAAAAGCTCCACTCTGTCATGGGAACCAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTTACTTCTCGTGGTGGCATCGAGAAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTCAATTTTCCTTCGACGGCCACCAATGCATCTTTTGTGCTGAGGAAGTACTATCTTTCATTGCTTCACCATTTTGAACAGATTTACTTCTTTAAAGCTGTGGGATGGACACCACAAATTTCTGATTCCTCTACTTGCCCAAGTGCAGCGACAATTCCTACGCAAGCAATGACCTCTATGTTGCCGCCATCAGAAAATCAGGCAGCATCCCAGCAACCAAGGAGTACTGCGACTGAACTTCCAGCAGTTGCTCCAAGTTCGACATCACCAGCGGGAGGGTTTCCAGTGATCGGAGTCATTGACGGAAAATTTGATAGTGGATATCTTGTTACTGTTACCGTAGGAACGGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTTCTGAGCAACCTTCTGAGCAACAAGTTTTACAGTCTGTCGGTGCTTTTGCCAAAGATGTTGCTACCTCCACCACACCAAATGCTCATCGCCGTCGTCGTCGGAAGAAGTCTGAGATAAAGCGGAGGGATCCCGCTCATCCAAAGCCAAACAGAAGTGGCTACAACTTCTTCTTTGCTGAGCAGCATGCCCGACTCAAACCGTTATACCCAGGAAAGGACAGGGAGATAAGCAGAATGATCGGTGATCTTTGGAATAAACTAAAAGAATCTGAAAGAACAGTTTATCAGGAGAAAGCTATGAAAGATAAAGAAAGATACAGAGTCGAGATGGAGGATTACAGAGAGAAGCTGAGAACAGGCCAAATCATCAGTGATGCAGTGCCCTTGCAGCAGCGACTTCCCGAACCAGACCTCAATATGGTCTATGCTGACAAAAACGAAGAAACCGAGGGCGGCGAGTCTCAAACACCAGATAATGATACAAGCTATGTGGAAGGCGACTCTGGAGAGTATAAAACGGAAGAGAAGGAGGAGGAGGAGGAAGAAGAAGAGGAAGACTCGGAAGACTCAGAAGAAGATGCATCTCCACAAGGAATTGGTAATGTGGACGTTAACATTTTGGCTGAGGAGGAACAGTGCGAGACGAAAACAGCCGAAGAGGATGCTGTTAGAAAAGAGAGTAGCATGGTCCGTGACGATAAAGAAGTTTATGCTGGGGATTCAGTAATGATGGAGGTGGAGGCAAAGACAGAACCAGAACCAACAACATCCATTAGAGAAGATTAAGATACTATACCGCTCAGTTTTTGCAGTGCCTTTTCTTCAATTTTTTTTCCTTTTTCTCCTTTGTCTCTAGCTTCCATTCCTTCTAACCTTCCATTACTTTAGCTAATACTTGTAAAGTTTTCTGACAGCTGTTGAGATTCTTATCAGGGAAAAGTTTTGGATCTTTCCATCAGTTCTGTTTTGGGAAGAAATTTTGTTGCCTTTTGTTGAACATTTCAACTGAATTCATTCCCTGATTTGTTTACAAGTTAAGGTGGCCATCAGTTTTCACTACTATGCCAGCCTTTTAGTTTAA 2523 42.41 MAVTALLYHFLFWVFESLPYYWELFHLFSYNACMLHKRNCGXDFLADWRRRIKGEGFLVFQDKSMYKVHWLMIEEERTEASWGIRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFMTSLEKLHSVMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPQISDSSTCPSAATIPTQAMTSMLPPSENQAASQQPRSTATELPAVAPSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSEQQVLQSVGAFAKDVATSTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEGGESQTPDNDTSYVEGDSGEYKTEEKEEEEEEEEEDSEDSEEDASPQGIGNVDVNILAEEEQCETKTAEEDAVRKESSMVRDDKEVYAGDSVMMEVEAKTEPEPTTSIRED 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 48452704 48458488 - XM_039020083.1 Bhi12g01502 53314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01502 573 Pfam ARID/BRIGHT DNA binding domain 129 211 IPR001606 GO:0003677
Bhi12g01502 573 Coils Coil 483 505 - -
Bhi12g01502 573 Pfam HMG (high mobility group) box 359 426 IPR009071 -
Bhi12g01502 573 MobiDBLite consensus disorder prediction 339 353 - -
Bhi12g01502 573 ProSiteProfiles ARID domain profile. 124 215 IPR001606 GO:0003677
Bhi12g01502 573 CDD HMGB-UBF_HMG-box 359 423 - -
Bhi12g01502 573 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 359 426 IPR009071 -
Bhi12g01502 573 MobiDBLite consensus disorder prediction 521 552 - -
Bhi12g01502 573 Gene3D - 118 219 IPR036431 GO:0003677
Bhi12g01502 573 PANTHER HIGH MOBILITY GROUP B PROTEIN 15 78 498 - -
Bhi12g01502 573 SUPERFAMILY ARID-like 121 226 IPR036431 GO:0003677
Bhi12g01502 573 SMART bright_3 125 216 IPR001606 GO:0003677
Bhi12g01502 573 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 78 498 - -
Bhi12g01502 573 SUPERFAMILY HMG-box 352 431 IPR036910 -
Bhi12g01502 573 MobiDBLite consensus disorder prediction 484 505 - -
Bhi12g01502 573 MobiDBLite consensus disorder prediction 332 365 - -
Bhi12g01502 573 Gene3D High mobility group box domain 343 438 IPR036910 -
Bhi12g01502 573 Coils Coil 408 428 - -
Bhi12g01502 573 MobiDBLite consensus disorder prediction 244 270 - -
Bhi12g01502 573 SMART ARID_2 121 211 - -
Bhi12g01502 573 CDD ARID_HMGB9-like 126 211 IPR045303 GO:0003677
Bhi12g01502 573 MobiDBLite consensus disorder prediction 439 573 - -
Bhi12g01502 573 SMART hmgende2 358 427 IPR009071 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02941 Bhi-Chr9:76665815 Bhi12g01502 Bhi-Chr12:48452704 1.37E-94 dispersed
Bhi11g03022 Bhi-Chr11:82234101 Bhi12g01502 Bhi-Chr12:48452704 5.49E-11 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2679 PF01388 ARID 1.50E-17 CL0123 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01502 - - bhj:120068345 1117.06