Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01503 AGAAGAGAAAACCAAAGCACTCGATCAAAATTAATACAAATATGCCAAAGTTCAAACCTTTCCCCCACAACTTCCCTTCATGTCCACACTGCCTCTTCTCCTTCTTCTTCTTCCTCCTCTAATCCAAATATGCAGCTGAACCGCCTCTGTTTTCTTCTACCAGCGGACTTCGATGAAGTCCAGCCACTTGATCGTGAAGATCACCTTCAAAAGCCCAACGACAACAAACAACAAAACGAACATAGTCGAGATTGTTGGTCTCAATTTCAAGCCTTTCTTAGAGATTCCCTCTTCAAACTCCACAACCTCAAATGGGTTAATTCTTGTTGCTACGGCGGACCCAGAAAGCCGCCGCCGTCTGATTTTCACGACACCGACGGGGTACAGCTTTCTGAGAAAGTCTGCGGCGACAACCCCAGAATCTTCAGTTTTGCAGAGCTCTATATTGGGACAAAAGGATTCAGTGAAGAGGAAATTCTCGGCAGTGGTGGATTTGGGAGGGTTTACAGAGCATATTTGCCTAGTGATGGAACTGTGGTGGCTGTGAAATGTTTGGCTGAAAAAGGGGAGAAGTTTGAGAAGACTTTTGTGGCGGAGCTGGTGGCGGTAGCCCATCTCCGACACCGGAATCTTGTCCGACTCCGTGGTTGGTGTGTTCATGAAGACCAATTGTTTCTTGTTTATGATTATATGCCCAACCGAAGCTTAGACAGAGCACTTTTCCGGCGGACAGAGAACGGCGGGACGAACCTGAGTTGGAAACAGAGAGTGAAGATTGTGAGTGGTCTAGCTGCTGCTCTGTTCTATCTTCATGAGCAATTAGAGACTCAAATCATTCATAGAGATGTTAAAACTAGCAACGTGATGCTTGATTCCAATTACAATGCTAGGCTTGGTGATTTTGGGTTGGCAAGGTGGTTGGAGCATGAACTTGAGTACCAAAACAGGGTACCTTCGATGGGTCACCACCAGTTCCGACTGGTGGAAACGACCAAAATTGGCGGCACAATTGGGTATCTCCCACCGGAGAGTTTTCAGAGAAGAAGCATTGCCACTGCAAAATCTGATGTTTTCAGCTTTGGTATTGTGGTTCTTGAGGTGGTTTCTGGTCGGCGGGCGGTGGACCTTACATGTCCTGATGATCAGATTGTGTTGCTTGATTGGATTCGAAAGCTCTCCGACGATGGTACACCGCTGCTTTCCGGTGATAACCGGCTGCCAGATGGCTCTTATAGTCTGATTGAAATGGAGCGTTTGATCCATTTGGGTCTCCTTTGTACACTCCAAAGCCCACAGTATAGACCAAGTATGAAATGGGTTGTGGAAGCACTTTCAGGTGGTATGATGGGGAATTTGCCAGCTCTTCCATCGTTTCAGTCTCATCCTCAGTACATTTCTCTGTCTTCCCCTACCAATGACAGCACTACCAGAAGCACTAGCAGTAGTAGAACCACAGCAACAAGATCAGACACAACAACAATCACAGTTAGTTCCTCAGGTTTCATTTCAGCCAGTGGAGAAACCATATATATGACTGCTGAGAATGGGAACAATTACACCAACTCTTCTGATAGGTTTCTTGACAGATCAAAAACTATTCAAATGATTGAAACCCCAAGAGTAATATCATTCAAGGAGATCATTTCAGCCACCAATAACTTCTCCGACTCGCAGCGGGTGGCGGAGCTCGATTTCGGAACTGCCTACCATGGCTTCCTTGACAGCAGCCACCACGTTCTAGTAAAGCGGCTTGGAATGAAGACTTGCCCTGCTTTGCGGGAAAGATTCTCAAATGAACTCCAAAACTTGGGCCGGCTTCGCCACAGAAACTTGATACAGCTTCGTGGGTGGTGCACAGAGCAAGGGGAGATGCTTGTGGTTTATGATTATTCAGCAGATCGTCTCTTGAGCCACCTGCTCTTCCACCATGACAATAGAGCCTTGCAATGGTGTCATAGATACAACATTATCAAATCTCTGGCTTCTGCAATTCTTTATCTTCATGAGGAATGGGATGAACAAGTCATCCACAGAAACATCACCTCATCGGCTGTCATTCTTGATCTTGATCTTAATCCAAGGCTGAGTTCTTTCGCTCTTGCAGAATTCCTAACAAGAAATGAGCACGGCAATCATCATGTAACCATAGATAAAAACAAATCAGTTCGTGGGATTTTCGGGTACATGTCACCAGAGTATTTAGACTCTGGGGATGCGGTGGCGACAGCTGATATATACAGCTTTGGTGTTGTGGTGCTAGAGGTGATTACCGGACAAATGGCGGTCGATTTTCGACGGCCAGAGGTATTGCTGGTGAGAAAAGTTCATGAATTCCACGCCCGGAAAAGACCTCTGGAAGAACTTATTGACATAAGGCTGAATGGAGAATACAACCACAAAGAACTGATGAGACTGTTGAGATTAGGAATCGCATGTACTCACTCAAGCCCAGATCTAAGACCAAAAATGAGGCAGATAGTTAAAATATTAGATGGAGATGACCAATGCTTCACTAAAGAAGAAAAAATGGAGAGCTTAGAAGGTTGGAAACAGAGAAATGCAACTTCTTTATCACTAGTTAAAAGGATTCAAGCTCTAGGAATTCAGTGAAAAACCAAAGTGACTCCAACAATCGAGGCACAAGATGAGTATTTCATTTTGATGGTTAAGAGTCTCTCTCTCTCATTCTGTAGGCTTCGTTCTTTCTCTTTCCCCTTTGATCTCTATACATAGTCTTTGTTAATATTGTGTAATATATATAACAGAGAAGTATGGCTTTCGGATGTTTAATTCTCGGTAACAAGATAGTAGTCACCTGTATTCTTGTTGGATTTCCACAGCCTTAGACCAATAGCATTTTTTCAATCTAATCTAATCATTGAAGTGCAATAAAAGGCAAAGAATATCCATAATTGATGGTAAA 2923 44.06 MQLNRLCFLLPADFDEVQPLDREDHLQKPNDNKQQNEHSRDCWSQFQAFLRDSLFKLHNLKWVNSCCYGGPRKPPPSDFHDTDGVQLSEKVCGDNPRIFSFAELYIGTKGFSEEEILGSGGFGRVYRAYLPSDGTVVAVKCLAEKGEKFEKTFVAELVAVAHLRHRNLVRLRGWCVHEDQLFLVYDYMPNRSLDRALFRRTENGGTNLSWKQRVKIVSGLAAALFYLHEQLETQIIHRDVKTSNVMLDSNYNARLGDFGLARWLEHELEYQNRVPSMGHHQFRLVETTKIGGTIGYLPPESFQRRSIATAKSDVFSFGIVVLEVVSGRRAVDLTCPDDQIVLLDWIRKLSDDGTPLLSGDNRLPDGSYSLIEMERLIHLGLLCTLQSPQYRPSMKWVVEALSGGMMGNLPALPSFQSHPQYISLSSPTNDSTTRSTSSSRTTATRSDTTTITVSSSGFISASGETIYMTAENGNNYTNSSDRFLDRSKTIQMIETPRVISFKEIISATNNFSDSQRVAELDFGTAYHGFLDSSHHVLVKRLGMKTCPALRERFSNELQNLGRLRHRNLIQLRGWCTEQGEMLVVYDYSADRLLSHLLFHHDNRALQWCHRYNIIKSLASAILYLHEEWDEQVIHRNITSSAVILDLDLNPRLSSFALAEFLTRNEHGNHHVTIDKNKSVRGIFGYMSPEYLDSGDAVATADIYSFGVVVLEVITGQMAVDFRRPEVLLVRKVHEFHARKRPLEELIDIRLNGEYNHKELMRLLRLGIACTHSSPDLRPKMRQIVKILDGDDQCFTKEEKMESLEGWKQRNATSLSLVKRIQALGIQ 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 48486153 48489075 + XM_039019923.1 Bhi12g01503 53315

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01503 826 Gene3D Phosphorylase Kinase; domain 1 474 587 - -
Bhi12g01503 826 Gene3D Phosphorylase Kinase; domain 1 81 187 - -
Bhi12g01503 826 ProSiteProfiles Protein kinase domain profile. 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01503 826 Gene3D Transferase(Phosphotransferase) domain 1 590 810 - -
Bhi12g01503 826 Pfam Protein tyrosine and serine/threonine kinase 518 787 IPR001245 GO:0004672|GO:0006468
Bhi12g01503 826 SMART serkin_6 111 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01503 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Bhi12g01503 826 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 1 825 - -
Bhi12g01503 826 Gene3D Transferase(Phosphotransferase) domain 1 188 406 - -
Bhi12g01503 826 SUPERFAMILY Protein kinase-like (PK-like) 94 401 IPR011009 -
Bhi12g01503 826 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Bhi12g01503 826 Pfam Protein kinase domain 112 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01503 826 ProSiteProfiles Protein kinase domain profile. 111 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01503 826 CDD STKc_IRAK 522 789 - -
Bhi12g01503 826 MobiDBLite consensus disorder prediction 420 448 - -
Bhi12g01503 826 PANTHER - 1 825 - -
Bhi12g01503 826 SUPERFAMILY Protein kinase-like (PK-like) 486 787 IPR011009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01503 - - - csv:101205657 1522.29
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01503 Bhi-Chr12:48486153 Bhi11g01779 Bhi-Chr11:50211957 8.83E-63 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g896 . . . Bda08g00033 . . . . Cmo08g00998 Cmo17g00106 . . . . . . . . . . . . . . Cla06g00751 . . . . . . . . . . . . Chy05g00555 . . . . . . . . . . . . Cma08g01026 Cma17g00103 Car08g00903 Car17g00092 Cpe12g00092 Cpe17g00250 Bhi12g01503 . . . . . Lcy13g0459 . . . . . . . Lsi09g01148 . . Cme05g00712
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010661 1 1 0 0 0 1 2 0 1 1 1 1 2 1 0 2 1 1 2 1 1 1 1 2 0 1 1 1 1 1 29
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88518 PF07714 PK_Tyr_Ser-Thr 2.30E-27 CL0016 Bhi PK