Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01504 ATGTGGATTATTCGTGGGATTTTTGTGGGATTGATTTTGATGATGATAATATTTGTAAGAGGAAATGAAGGTCAATCTTATAGAAGTGTAGGAATGAAGAAATTGACATGGAAGACTTTGATTGTTGACCAGAATGGCCATGGAAATTTCTCTACAATTCAAGCTGCCATTGATTCTATTCCTTCTAATAATAGATTTTGGGTCTCCATTCATGTTAAACCTGGTGTTTATAGAGAGAAGGTGAAAATTCCATATGATAAACCATATATCATTTTGAAAGGACAAAGCAAAAGAACAACAAAGGTTGTTTGGGACGACCATCTCACTGTTGCTCAAAGCCCTACTTTCACTTCTTCAGCTGATAATATTGTCGTCAAATCCATCACTTTTGTGAATTCTTATAATTATCCATGGAATAATGGAAATCCAAGAGTTCCAGCCGTAGCAGCAATGATCACAGGCGACAAGTCGTCTTTCTATAAATGTGGTTTTTATGGTGTTCAAGACACATTATGGGATGATCAAGGACGACATTACTATCATCGTTGCACCATTCAAGGAGCTGTCGACTTTATTTTTGGAGCTGCCCAATCCATTTTTCAGGGGTGTTCAATATCAGTGGTTGGAGAAGCACTTCTTCCATTAGGGTCCACAAGCTTCATAACAGCACAAGGAAGAACCAATCCAAATGATGCAAATGGTTTTGTTTTCAAAGAATGCAATGTGTTTGGGAGTGGCTCAGCCTTCTTAGGAAGGCCATGGAGGGGATATTCAAGAGTTATCTTTTACAACTCCAACTTCTCCAACATCATAAACCCTAATGGTTGGGATCCTTGGCATTTTGTTGGTCAAGAGAACCAATTGACCTATGCAGAAAATGGTTGTTACGGACCAGGTGCTGACATGTCTCATCGAGTAGAATGGGAAAAGAAGCTCAGTTTAAATGAAATACGACAACTAACTAGTTTAAATTTTATCAACGGTGAAAGTTGGATCCAAGATCAACCTTATTAA 1014 38.07 MWIIRGIFVGLILMMIIFVRGNEGQSYRSVGMKKLTWKTLIVDQNGHGNFSTIQAAIDSIPSNNRFWVSIHVKPGVYREKVKIPYDKPYIILKGQSKRTTKVVWDDHLTVAQSPTFTSSADNIVVKSITFVNSYNYPWNNGNPRVPAVAAMITGDKSSFYKCGFYGVQDTLWDDQGRHYYHRCTIQGAVDFIFGAAQSIFQGCSISVVGEALLPLGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAFLGRPWRGYSRVIFYNSNFSNIINPNGWDPWHFVGQENQLTYAENGCYGPGADMSHRVEWEKKLSLNEIRQLTSLNFINGESWIQDQPY 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 48491337 48495707 - XM_039019081.1 Bhi12g01504 53316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01504 337 ProSitePatterns Pectinesterase signature 2. 185 194 IPR033131 -
Bhi12g01504 337 SUPERFAMILY Pectin lyase-like 38 333 IPR011050 -
Bhi12g01504 337 ProSitePatterns Pectinesterase signature 1. 64 83 IPR018040 -
Bhi12g01504 337 Gene3D - 35 337 IPR012334 -
Bhi12g01504 337 PANTHER PECTINESTERASE 10-RELATED 13 336 - -
Bhi12g01504 337 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 336 - -
Bhi12g01504 337 Pfam Pectinesterase 40 328 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01516 Bhi-Chr6:45181586 Bhi12g01504 Bhi-Chr12:48491337 1.42E-96 dispersed
Bhi11g01268 Bhi-Chr11:37438281 Bhi12g01504 Bhi-Chr12:48491337 5.16E-63 dispersed
Bhi12g01504 Bhi-Chr12:48491337 Bhi11g02033 Bhi-Chr11:57665942 1.37E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01504 - - csv:101205421 605.134