Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01550 AGGATTAACCATTGCCCTTTATAAATACCATACCCACATGGAAACAATCCCACACTCTGTTTCTCTTGAACAGAGAGACTTTATTGCTCTGTTTTGAGATTTCAACAATGGCGGCTACAAATTGCTCTCTGACTCTGGCCCAACTCCTCGGCCCCAATGTCACCAACTCCGGCGCCGCTGCCTCCTTCATTTGCGACCAATTCTCCGCCTCCACCAACAACTTCTCCGACACCAAATTCGCCGTCGACACCGTCTACCTCCTCTTCTCCGCCTATCTTGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGTGCCGGCTCCGTCCGCGCCAAAAACACCATGAACATCATGCTCACCAACGTTCTCGATGCTGCTGCCGGCGGCCTTTTCTACTACCTCTTCGGCTTCGCCTTTGCCTTCGGCACCCCTTCCAACCCCTTCATCGGCCGCCATTTCTTTGGTCTCAAGTCAGTCCCCTCCACCGCCGCCGATTACAGCTTCTTTCTCTATCAATGGGCTTTCGCTATCGCTGCCGCCGGCATCACCAGCGGCTCGATTGCCGAGCGAACCCAATTCGTTGCCTATTTGATCTACTCCGCTGTTTTGACCGGTTTTGTTTACCCAGTCGTGTCCCATTGGTTCTGGTCTCCAGACGGTTGGGCCAGCCCGTCACGGACCAGTGGTGACCTCTTGTTCGGAACCGGAGTCATAGATTTCGCCGGTTCAGGCGTGGTTCACATGGTCGGTGGAATCGCTGGACTTTGGGGAGCTTTAATAGAAGGACCACGAATCGGTCGATTTGACAGAACTGGTAGATCCGTTGCTTTACGAGGCCATAGTGCTACGTTAGTCGTTCTCGGTACCTTCATGCTTTGGTTCGGTTGGTACGGGTTCAACCCCGGTTCATTCACCAAAATCTTAGTTCCATATAGATCAAATAATTTCTACGGACAGTGGAGCGCCGTCGGTCGGACCGCCGTGACGACGACACTAGCCGGTTGTACGGCAGCACTAACGACCCTTTTCGGAAAGCGAATTCTATCCGGCCATTGGAACGTCACCGACGTCTGCAATGGCTTACTTGGTGGCTTCGCCGCCATAACCTCTGGTTGCTCTGTAGTCGAGCCATGGGCCGCCGTGATATGTGGGTTTGTGGCGGCGGTGGTTTTAATCAGCTGCAACAAACTAGCAGAGAAGGTGAAATTTGACGACCCATTAGAGGCGGCACAACTACATGGCGGTTGTGGCGCGTGGGGGATAATTTTCACTGCGTTGTTTGCAACAAAGAAATATGTGAACGAAGTGTACGGCGGAGATTCGAGGCGGCCACACGGGCTGTTTATGGGCGGCGGAGGGAAGTTGTTGGGTGCTCATTTGATACAAATTTTGGTGATTGTTGGGTGGGTTAGCGTCACAATGGGGCCGTTGTTTTTTGTGCTACACAAGCTGAAACTATTAAGAATCTCGCCGGAGGATGAGATGGCCGGAATGGATATGACCAGACACGGTGGCTTTGCTTACGTGTACCATGATGAAGATGAATCTCCGCCCAATGGTGCCCAAATGAGTAAGATTAAGCCAAGGGAAACAAGTCCAATTGGAAATTATGAAAATTGAGGTTTTTTACTTTTTGCCAAAATTCTATTTTGCAAGTCTTTAAAAAGTTAAAAAATACAAAAAAAAAAAAAAAAAAAAAAATTATCCTCTCTCCCAATCTTAAAAGGTTTAGTGATGTATAGTAAGTGGAGAAGTATTTTTCTTATCTTTTAAGAACTTGGGGATGTGGGTGTGTGTGAGGAGGTGATGTATTGATTGTAATATGGACTAATTATGTGTTATATATTTAGGTTAATCTTCTTATTTTTAAATATTAAGTATATTTTCTCTCA 1891 48.18 MAATNCSLTLAQLLGPNVTNSGAAASFICDQFSASTNNFSDTKFAVDTVYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNPFIGRHFFGLKSVPSTAADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSAVLTGFVYPVVSHWFWSPDGWASPSRTSGDLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRTGRSVALRGHSATLVVLGTFMLWFGWYGFNPGSFTKILVPYRSNNFYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAVICGFVAAVVLISCNKLAEKVKFDDPLEAAQLHGGCGAWGIIFTALFATKKYVNEVYGGDSRRPHGLFMGGGGKLLGAHLIQILVIVGWVSVTMGPLFFVLHKLKLLRISPEDEMAGMDMTRHGGFAYVYHDEDESPPNGAQMSKIKPRETSPIGNYEN 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 50387940 50389830 - XM_039019803.1 Bhi12g01550 53362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01550 503 PANTHER AMMONIUM TRANSPORTER 5 495 - -
Bhi12g01550 503 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 495 - -
Bhi12g01550 503 Gene3D Ammonium transporter AmtB like domains 26 490 IPR029020 -
Bhi12g01550 503 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bhi12g01550 503 TIGRFAM amt: ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bhi12g01550 503 MobiDBLite consensus disorder prediction 477 503 - -
Bhi12g01550 503 SUPERFAMILY Ammonium transporter 46 453 - -
Bhi12g01550 503 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01049 Bhi-Chr6:28929135 Bhi12g01550 Bhi-Chr12:50387940 0 dispersed
Bhi06g01050 Bhi-Chr6:29000896 Bhi12g01550 Bhi-Chr12:50387940 0 dispersed
Bhi01g00039 Bhi-Chr1:740159 Bhi12g01550 Bhi-Chr12:50387940 0 transposed
Bhi03g00803 Bhi-Chr3:14796524 Bhi12g01550 Bhi-Chr12:50387940 4.34E-18 transposed
Bhi04g01007 Bhi-Chr4:25360377 Bhi12g01550 Bhi-Chr12:50387940 8.64E-27 transposed
Bhi11g01784 Bhi-Chr11:50378055 Bhi12g01550 Bhi-Chr12:50387940 1.07E-22 transposed
Bhi12g01550 Bhi-Chr12:50387940 Bhi05g00153 Bhi-Chr5:3188354 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01550 K03320 - csv:101212168 936.021