Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01600 CATTACGATTTTTGAACTTTCCATTTCTTCCTTTCTCTCATTTCAACGGATCTTCTTCTTCTTCTTCTTCTTCCTAGATTAGCTTTCTTGAACTCCATCGATTGAAAGCCCTAGTGATCTGCGAATCAATCTTGATATCAAATCAAGATATAAACTTCTTCTGCACTTCAGTTTTCTTCTGGATCGTCACTGTAATGGCACCAACACCGTCTTCTAAATCAAATCATGGTCACATAAGTCAATTGAGAACTCCTCAAGCGAAGCGGCTCAATTTCATCAACCCCCCTAGGCCACATTCATCACCTTTCCCCAATTCCGCCGTTAAAGACTCCCAATCGGAGCATCCGGTTGAAGTAATCGGCCGGATCCGAGACTATCCGGACCGGAAAGATAAACCGGTTTCGATTCTGCAGATAAATCCCGATGGACAGAACGTTCGGGTTCGGGCTGATTTCGGGTACAGGGATTTCAGTCTCGACGGAATTTCGCTGTCGGAAGAGGAAGATCTCGACTCGTTTTACAAGAAATTCGTTGAAGCGAGGATTCATGGTGTTAAGTTGGGTGAGAAATGTACGATTATGATGTACGGACCAACCGGTGCCGGCAAGAGCCACACGATGTTTGGTTGTGCGAAGCAGCCGGGGATTGTGTATCGGTCGCTTAAGGACATTTTAGGCGATGGAGAGAGTGAAGCCGCCACTGCCGTCGGAGAAGGTGGTGGCGAGCGGCTGAACGTTGGGATGTTTGTACAAGTCACGGTGCTGGAGATCTATAATGAAGAAATATATGATCTTCTATCGAGCAATTCTGGTGGAGGGCTAGGGCTGGGCTGGCCTAAGGGTAGTGCCTCTAAGGTGAAGCTTGAAGTAATGGGGAAGAAGGCAAAGAATGCTACTTATCTATCTGGGAATGAAGCAGGAAAAATTTCTAAAGAGATTCAGAAAGTAGAGAAAAGAAGGATTGTTAAAAGTACTCTCTGTAATGAGAGAAGTTCTAGAAGCCATTGCATGATAATCCTAGACGTGCCGACTGTTGGTGGACGCTTGATGCTCGTCGATATGGCTGGTTCTGAAAATATAGAGCAAGCTGGGCAAGTTGGATTTGAGGCAAAAATGCAGACAGCAAAGATTAATCAGGGTAACATTGCATTGAAAAGAGTGGTTGAATCAATTGCCAATGGTGATTCTCATGTGCCTTTCAGAGACAGTAAATTGACTATGCTTCTGCAGGATTCTTTTGAGGATGATAAATCCAAAATTCTGATGATTCTGTGTGCCAGCCCTGATCCAAAGGAATTACACAAGACAATCTCTACTCTCGAATATGGTGCGAAAGCCAAATGCATTGTTCGAGGTCCTCATACACCAACCAAGGATAAATGTGGTGCTGACGATTCTGCTTCTGCTGTTATTCTGGGATCGAGAATTGCAGCCATGGATGATTTCATCTTCAAGTTGCAGAAGGAGAACAAACTTAGAGAGAAAGAGCGAAATGAGGCACATAGAGAGCTCATGAAGAAAGAAGAGCAGGTATCAGCATTGAGAGCTAAGCTTGAGCTAGCAGGGTCGAAAGGATCAGGCGTGAGTGAGGAAGAGATCAATTCGAAGGTGAATGAGAGAACCCAACTTCTGAAACTTGAGTTGGAGAGGAAGCTGGAGGAGTGCCAGCGAATGGCCAATGAATTTGTTGAATTGGAAAGGAGAAGGATGGAAGAAAGGATACTGCAGCAGCAACAAGAGGTCGAAATGTTGAGACGGCGGTTGGAAGAGATCGAATCCGAGCTATTGAATTCAAGGGATGCAACAAACAACGACGTAAACAAATCAAAGGACATGGATGGCTGTAGGCTTGCTAAAAGGCTCTTAGGAGTATATGCTAGTGCAGAGGCAGGGATGGTGAAGTCCATGGACTTGGACATGGATGATCAAGAACCGATACACGAAGTAAAACTCATTGGCGGTATGGATTATCGACCAACTACCAACAATGGTATCCAAAGCCTACTAGACAAAGTGAATGAGAAAGTTGATCTTGACGTGTTTTCATCACGGTTTGGGGATGGGGATAGAGTATGCCTGAGTACCGTGTTCGAGGAAGAAGAAGCAGAGGAGGAAGAGGAGAAGGAAGTTATAGAAGAAAAGAGAGTGTGTACAGTTGAAGGGCTAACCAAACTGACACCGGATATTCCAGACAAATGTCAGAACAAAGATGATTTTCTCAAGGAGAGATCAGAGATTGGCATCGGATTGTTAAACGAAAACGAATGCTCCAAGGACACTGCATTCTCGAGAAAATTGAGAATTCAAAATATATTTACTCTTTGTGGAAACCATAGGGAGCTTTCTCAACAAATTGCCCCAATACCTGAGAAGAAGAGATCTGATGATGCTGAAAATCAGCACCCTTCATCTCCATTGAAGACAATTGGTGAAGTTCAGAAGCCTGCATCAGATCATTACACTCAAATTCTTTCAGACCTGACGAACCAGAATGGAGCTGTATTGACAGAAAATGAGGAGACAATGCAGCCTATAAAGCTACAAGTAAAGGGAGGAGTAAACAGTCTTAGTGTTGTACCACTGAGTCCAATTCCATTGTGCTCAAAGGAAAACAAGCTACCCGTCACGCCAAACATCGTATCGCAGCAGAGTGATGGTCTATCACCGAGGCTCTGCGCTACGCCATTCATCACTGTAAGAAGACACTGAGGGAAGGAAAGGGAGAGATTTATGTTTAGGACTTTTGCCATTTTGTTGTGCTTGAGTATATAGAGATGAATATACTCTTGTGTTGAACTCCGAAGTTGTTAATAGGTTCATGAAATCTTCAATGTATTCAATTATATCTTATATACTTTGTTAAATATGAAAGCTACTCGTCCTTCCCA 2887 43.61 MAPTPSSKSNHGHISQLRTPQAKRLNFINPPRPHSSPFPNSAVKDSQSEHPVEVIGRIRDYPDRKDKPVSILQINPDGQNVRVRADFGYRDFSLDGISLSEEEDLDSFYKKFVEARIHGVKLGEKCTIMMYGPTGAGKSHTMFGCAKQPGIVYRSLKDILGDGESEAATAVGEGGGERLNVGMFVQVTVLEIYNEEIYDLLSSNSGGGLGLGWPKGSASKVKLEVMGKKAKNATYLSGNEAGKISKEIQKVEKRRIVKSTLCNERSSRSHCMIILDVPTVGGRLMLVDMAGSENIEQAGQVGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKELHKTISTLEYGAKAKCIVRGPHTPTKDKCGADDSASAVILGSRIAAMDDFIFKLQKENKLREKERNEAHRELMKKEEQVSALRAKLELAGSKGSGVSEEEINSKVNERTQLLKLELERKLEECQRMANEFVELERRRMEERILQQQQEVEMLRRRLEEIESELLNSRDATNNDVNKSKDMDGCRLAKRLLGVYASAEAGMVKSMDLDMDDQEPIHEVKLIGGMDYRPTTNNGIQSLLDKVNEKVDLDVFSSRFGDGDRVCLSTVFEEEEAEEEEEKEVIEEKRVCTVEGLTKLTPDIPDKCQNKDDFLKERSEIGIGLLNENECSKDTAFSRKLRIQNIFTLCGNHRELSQQIAPIPEKKRSDDAENQHPSSPLKTIGEVQKPASDHYTQILSDLTNQNGAVLTENEETMQPIKLQVKGGVNSLSVVPLSPIPLCSKENKLPVTPNIVSQQSDGLSPRLCATPFITVRRH 837
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 51957490 51961199 + XM_039051095.1 Bhi12g01600 53412

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01600 837 Pfam Kinesin motor domain 90 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g01600 837 SMART kinesin_4 49 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g01600 837 Coils Coil 425 459 - -
Bhi12g01600 837 PRINTS Kinesin heavy chain signature 123 144 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g01600 837 PRINTS Kinesin heavy chain signature 260 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g01600 837 PRINTS Kinesin heavy chain signature 283 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g01600 837 PRINTS Kinesin heavy chain signature 333 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g01600 837 Coils Coil 629 649 - -
Bhi12g01600 837 MobiDBLite consensus disorder prediction 1 23 - -
Bhi12g01600 837 MobiDBLite consensus disorder prediction 1 50 - -
Bhi12g01600 837 ProSiteProfiles Kinesin motor domain profile. 51 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g01600 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 391 IPR027417 -
Bhi12g01600 837 Gene3D Kinesin motor domain 34 387 IPR036961 -
Bhi12g01600 837 PANTHER KINESIN-RELATED 26 741 IPR027640 GO:0003777|GO:0007018
Bhi12g01600 837 PANTHER KINESIN-LIKE PROTEIN KIN-10A 26 741 - -
Bhi12g01600 837 MobiDBLite consensus disorder prediction 723 747 - -
Bhi12g01600 837 Coils Coil 473 536 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01600 - - K10398 csv:101206310 1434.47
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01600 Bhi-Chr12:51957490 Bhi03g01609 Bhi-Chr3:34041247 7.05E-32 dispersed
Bhi12g01600 Bhi-Chr12:51957490 Bhi08g01747 Bhi-Chr8:50359433 9.63E-31 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g735 . . . . . Bpe14g01265 . . Cmo08g01050 Cmo17g00152 . . . . . . . . . . . . . . . . . . . . . Cone14ag0161 Cone15ag0172 . Cone4ag0340 . Csa02g01048 . . Blo02g00696 . . Bda13g00053 . . . . Sed09g0662 . . Cma08g01075 Cma17g00153 Car08g00947 Car17g00135 Cpe12g00130 Cpe17g00203 Bhi12g01600 Tan06g2394 Cmetu05g0124 . . . Lcy13g0389 . . . . . . . . . . Cme05g00583
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006035 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 5 2 1 1 1 1 1 1 1 1 2 1 1 39