Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01628 TTAGATGATTCTCCAAAATTTAAATCCTCTTGAAACTATTATTGACATCAACTAAAAGAAAATTTCAGATGATTAAAAGAAAAGCTCGTTCTTTTTAGTTTCTTTTTTCTTTTTGTTTCTAATTACTCTGCTATTTGGTATTTATTTATAGCCAATGAAGCCATCTCCTCTGTCCAAGAAAACAGAGGCTACTAAAAAAACAGAGTAGTAGCGTTCTCCTTTCATGAACCACAATTCCCCTTCTTCATTTCTTCTAAAATTTCAATGAATTCTTCTTTCTTTCACTCCCAAAACTCCAATCTCTCGCCAGAATCCTCCTTTAGCTCCTTCGAATCTCTCCGATGGGAAGGTTTTCAAATCAACGATAACTCTCTGCCCTTCAACGAGAATGATTCCGGCGAAATGCTCCTTCACAGCTTAATCTCCGAGGCTGCCGTGTACCCACCGGGGAATTGCCACCAGGAGACTCCGATCAAAGATGAGGAGGTCGATTCACTCGAAGAAGAAGAACCCCACAAGAGAAAGTCTTACAGAGGAGTCCGTCGGCGACCGTGGGGAAAATTCGCGGCAGAGATACGGGACTCGACCCGAAATGGGGTTCGAGTTTGGCTCGGGACATTCGACAGCGCCGAGGCGGCCGCTTTGGCCTATGATCAAGCCGCTTTCTCAATGAGAGGTTCCGCCGCCGTTCTCAATTTTCCGGTTGAAAGAGTTCAGGAATCGCTCAAGGAGATGGAAATGATCAACTCCGCCGCATGCGACGGCGACGGCGACGGAGACGGCGGATCTCCGGTGGTGGCTCTGAAGAGAAAACACTCGATGAGGAAGAAATTCACGAGAAGAACAAACAAAGAGAGAGATGAAAATGGGAAGATTGAGAATAATGTCGTTGTTTTGGAAGATCTTGGCTCTGATTATTTGGAAGAACTTCTAAAGTCGTCGGAAAATCTCCGGCCGTGGTGAAATCTCTCTGACAATCTTAAAGTCCAATCATTTTTGTGTTAGGCCGAACAAATTATTTGAGAAGCTACAACAATCTTATACAAAATAGACTATATGTTAAAAAGAAACAACTACATTGTGACAGTCATACACAAGATATTATTACCTTGTTTATAGCTTTGCAACTTAGATGTTCATGTGATATAACCCTAGATTATTGCCATTAGTTAATATGGCTTCCAAGATTTTGTATCATTTTTTCCTTGCCTTTTTTAAGCAAGAGAAAAATAACAAAAATTTTGGATTTTTTTTCTTTTTTTTCTGGTTGTATTAATGTATAAATTATATTTTTGTTCGTCTATCTAGTA 1310 40.31 MNSSFFHSQNSNLSPESSFSSFESLRWEGFQINDNSLPFNENDSGEMLLHSLISEAAVYPPGNCHQETPIKDEEVDSLEEEEPHKRKSYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDSAEAAALAYDQAAFSMRGSAAVLNFPVERVQESLKEMEMINSAACDGDGDGDGGSPVVALKRKHSMRKKFTRRTNKERDENGKIENNVVVLEDLGSDYLEELLKSSENLRPW 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 52687729 52689038 - XM_039018926.1 Bhi12g01628 53440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01628 232 Pfam AP2 domain 88 138 IPR001471 GO:0003700|GO:0006355
Bhi12g01628 232 CDD AP2 87 147 IPR001471 GO:0003700|GO:0006355
Bhi12g01628 232 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Bhi12g01628 232 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Bhi12g01628 232 MobiDBLite consensus disorder prediction 67 87 - -
Bhi12g01628 232 ProSiteProfiles AP2/ERF domain profile. 88 146 IPR001471 GO:0003700|GO:0006355
Bhi12g01628 232 PANTHER DNA-BINDING DOMAIN 31 225 IPR044808 GO:0003700|GO:0009873
Bhi12g01628 232 Gene3D AP2/ERF domain 87 148 IPR036955 GO:0003700|GO:0006355
Bhi12g01628 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 31 225 - -
Bhi12g01628 232 MobiDBLite consensus disorder prediction 61 87 - -
Bhi12g01628 232 SMART rav1_2 88 152 IPR001471 GO:0003700|GO:0006355
Bhi12g01628 232 SUPERFAMILY DNA-binding domain 88 148 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi09g01160 Bhi12g01628 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01160 Bhi-Chr9:27316189 Bhi12g01628 Bhi-Chr12:52687729 9.32E-45 dispersed
Bhi12g01628 Bhi-Chr12:52687729 Bhi03g00337 Bhi-Chr3:7075194 5.70E-32 dispersed
Bhi01g00737 Bhi-Chr1:13801605 Bhi12g01628 Bhi-Chr12:52687729 2.10E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2689 PF00847 AP2 9.00E-15 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01628 K14516 - csv:101206564 357.451