Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01637 AACCTCCTCAATATTCTTATTCATTACACACAATCCACCACAAACTGCCCATTTTTCTAAATCCAAAAAACCATGAACAATGTACAAGTTTTCAATGCTTACGATCGCCAAACCGATCTCAAAGCTTTCCACAACACCAAATTGGGAGTAAAGGGACTGGTCGATTCCGGCGTTACCCAAATCCCAAGAATCTTCAGCCACGACGATCAATCCCCGTCCCTCATCTCCTCCCCTGCTGCTGCTGTGGCGGAGAAATTAGCCGGCGAAACAGAGGCCAAGAACTTAGCAATCCCTGTTATTGATCTACAACAAACCCACAAAAACAGAGCAAAAATAATCAACGAAATCAGAGAAGCCTCCGAGAATTGGGGATTCTTTCAAATCCTTAACCATGGAGTTCCGTTGCCCGTTATGAAAGAGATGATGAACGGAATCCGGCGGTTTCACGAGCAAGACGGCGAAATGAAGAAGGATATTTACTCGAGAGATTTTCAGAGGAAGATTCTTTTCAATACTAATTTCGATTTGTTCAAAGGGGTTTCGACGAATTGGAGGGACACGTTGACGGTGGTGGTGGCGCCGCATGGGGTGGAGCCGGAGGAGATACCGGCGGTTTCTAGGGAGGCTATTTTGGATTTCTCGAGAAGGGTGAAGGAACTGGGAGACATTTTGTTGGAATTTTTGTCGGAAGGATTAGGAGTGGCGCCAAATCGGCTGAAGGAGTTGGGTTGTGGAGAGGGAATGGTGATGTTCTGCCATTACTATCCGCCGTGTCCTCAGCCGGAACTCACTTGGGGAACCACCGATCATACCGATGGTTGTTTTCTGACGGTTCTTTTGCAGGATGACTTCGGCGGCCTCCAAGTCCGCCATGGCGATCGGTGGGTGGATGTTCATCCCATTGAAGGAGCTTTTGTTGTAAACATTGGCGATTTCATGCAGTTGATGTCCAATGATAGGTTCAAAAGTGTGAATCATAGGGTTTTAGCAAATAAAGGAGGGCCAAGAATTTCAGTGGCAAGTTTCTTTAGGTGCAATCTTCCACCAGAAAATGGTTTAGTTTTTGGACCTCTTAAGGAGTTAAGATCAGAAGAAAATCCAGACATTTATAGAGAAACATCCATCAAAGACTATGTGGCTCACTACTATCAGAAAGGCCTCAATGGCATATCTGCTCTTGAACACTTCAAACTTTGAAGAAAATATGATGCAAGTTTTAGTTATGTTTGAATGCACGCATGTGTGGAATCCAATATTATTGTTTAATAATGTATTTGAGAAATATGATGTAGTGGCTTTTGGTTTAGATGGAAATATCTATCAATATGTTGATATATCTGTAAATCAGAAGTTTCGACTTTGATATATTAAATATTAATAGATATCTTCAATAATTAAGGATTAA 1405 42.42 MNNVQVFNAYDRQTDLKAFHNTKLGVKGLVDSGVTQIPRIFSHDDQSPSLISSPAAAVAEKLAGETEAKNLAIPVIDLQQTHKNRAKIINEIREASENWGFFQILNHGVPLPVMKEMMNGIRRFHEQDGEMKKDIYSRDFQRKILFNTNFDLFKGVSTNWRDTLTVVVAPHGVEPEEIPAVSREAILDFSRRVKELGDILLEFLSEGLGVAPNRLKELGCGEGMVMFCHYYPPCPQPELTWGTTDHTDGCFLTVLLQDDFGGLQVRHGDRWVDVHPIEGAFVVNIGDFMQLMSNDRFKSVNHRVLANKGGPRISVASFFRCNLPPENGLVFGPLKELRSEENPDIYRETSIKDYVAHYYQKGLNGISALEHFKL 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 52926930 52930592 - XM_039019399.1 Bhi12g01637 53449

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01637 374 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE HOMOLOG 1-LIKE 6 373 - -
Bhi12g01637 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 73 143 IPR026992 -
Bhi12g01637 374 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 6 373 - -
Bhi12g01637 374 Pfam 2OG-Fe(II) oxygenase superfamily 225 319 IPR044861 -
Bhi12g01637 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 323 IPR005123 -
Bhi12g01637 374 Coils Coil 78 98 - -
Bhi12g01637 374 Gene3D - 16 357 IPR027443 -
Bhi12g01637 374 SUPERFAMILY Clavaminate synthase-like 23 364 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01637 - - - csv:101220285 659.062
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi09g01173 Bhi12g01637 CCT
Bhi09g01173 Bhi12g01637 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00382 Bhi-Chr7:17090791 Bhi12g01637 Bhi-Chr12:52926930 4.97E-105 dispersed
Bhi12g01637 Bhi-Chr12:52926930 Bhi11g01033 Bhi-Chr11:30632454 1.75E-58 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g652 . . . . . . . . . . . Cma14g01801 . Car14g01618 . . . . . . . . . . . . . . . . . . . Cone7ag0313 . Lsi05g01707 . . . . . Bda11g00624 . . . . Bma06g01595 . . Cmo14g01839 . . . . . Cpe17g00187 Bhi12g01637 . . Lac12g2192 Hepe03g0269 . Lcy13g0358 . . . . . . . . Csa03g01230 . .
Vvi7g534 . . . . . . . . Cmo08g00296 . . . . . . . . Bhi09g01173 . . . Hepe03g2060 . . . . . . . . . Cone17ag0608 Cone20ag0807 . . Lsi02g02226 . . Cme01g01985 . . . . . . Bma09g00602 . . . . Cma08g00298 . Car08g00272 . . . Bhi12g01637 . . Lac12g2192 Hepe03g0269 . Lcy13g0358 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000120 1 1 3 2 2 1 5 9 8 1 3 7 6 4 12 8 7 4 4 8 9 14 11 13 12 12 11 13 13 18 222