Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01646 ATGTGGGACGTCCCAGTATTTTTTTTTAAATTTATCCCACTTGCAAATTTTCCGCTAAATCTGGCTAATTCTAATCCGTGGTGGACCAGTCGGGTGGCCTTTCCGGCCACCGGCCCCGGCCCGATATCAACCACCCTCGACGGCAGCAGAAGAGATCAAGGTGACGAAGAAGACGAGCCAAAGGGAGGCGGCGTGGTGGTAGGAAACCGCCGATCGAGAGGGCGGCCACAAGGATCAAAAAACAAACCAAAATCTCCAATCATCGTCACACGCGACAGCCCACACGCGCTTCGCACGCACGTGATCGAGATCGTCGGAGGAGCCGATGTCGCCGACAGCATAAACCAATTCTCCAACCGCCAACAACGTGGGGTTTGTGTTCTCAGCGGCAGGGGTACAGTTGTCGACGTAACTCTCCGGCAATCCGCCGCTTCGGCCGCCGTGATCCAACTCCACGGCCGGTTCGAGATTCTATCTCTGAGTGGGTCATTTCTTCCCGGCCGAGCCCCTCCCGGTTCGACCGGGCTGACCGTGTACATGGCTGGCGGGCAGGGGCAGGTGATTGGAGGGACGGTGGTGGGCCCACTATTGGCGGCTGGGCCTATAATTTTGATAGCAGCTACTTTTGCTAATGCAACTTATGAGAGATTGCCTTTACAAGACGACCTTAATTATCAAGAAAAAGAGGTTTCTCCGGCCACCACGTGCGGCGGAGAAGTGGAGGAGCCGCCACCGTATCCTCGGATGGCAACTTCAATTTACGACTTGGTTGCACCAAATAATCATCAAGGAATTGATGGTTATGCTTGGGCTCATGAGAAACCATCTCTTGTTTAATTTTCACTATTACTATATTATGTTTGTAATTTTTCCTATTAATTTTTATGGTTGTTTTTA 897 51.62 MWDVPVFFFKFIPLANFPLNLANSNPWWTSRVAFPATGPGPISTTLDGSRRDQGDEEDEPKGGGVVVGNRRSRGRPQGSKNKPKSPIIVTRDSPHALRTHVIEIVGGADVADSINQFSNRQQRGVCVLSGRGTVVDVTLRQSAASAAVIQLHGRFEILSLSGSFLPGRAPPGSTGLTVYMAGGQGQVIGGTVVGPLLAAGPIILIAATFANATYERLPLQDDLNYQEKEVSPATTCGGEVEEPPPYPRMATSIYDLVAPNNHQGIDGYAWAHEKPSLV 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 53155832 53157788 + XM_039019098.1 Bhi12g01646 53458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01646 278 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 221 - -
Bhi12g01646 278 CDD DUF296 98 209 IPR005175 -
Bhi12g01646 278 Gene3D - 97 232 - -
Bhi12g01646 278 MobiDBLite consensus disorder prediction 49 64 - -
Bhi12g01646 278 ProSiteProfiles PPC domain profile profile. 94 231 IPR005175 -
Bhi12g01646 278 PANTHER DNA-BINDING PROTEIN-LIKE 47 274 - -
Bhi12g01646 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 274 IPR014476 GO:0003680
Bhi12g01646 278 MobiDBLite consensus disorder prediction 38 89 - -
Bhi12g01646 278 Pfam Plants and Prokaryotes Conserved (PCC) domain 98 210 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00976 Bhi-Chr6:26791656 Bhi12g01646 Bhi-Chr12:53155832 4.46E-71 dispersed
Bhi06g01828 Bhi-Chr6:51245070 Bhi12g01646 Bhi-Chr12:53155832 1.98E-81 dispersed
Bhi12g01646 Bhi-Chr12:53155832 Bhi12g02623 Bhi-Chr12:81027000 6.49E-60 dispersed
Bhi12g01646 Bhi-Chr12:53155832 Bhi01g00104 Bhi-Chr1:2168956 9.16E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01646 - - csv:101221494 393.66