Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01650 ATTCAGAGCATGAATTTTCCGATACAGAAAATGACGTTTTTCTCCCTCCATACACTCACACTCCACCGCTGCACCATGGCTATCAACCGACTTCACATCCACCTCCACTTCACGGCAGTTCTCCTCCTTCTCTACTACCGGACCACCGCCCTCCACCGCCGCAACCACCACCTCCTCTGGTCTCTCCTCACCCTCGCTGAACTCTTGTTCGCCTTCGTCTGGCTCCTAGCCCAGTCCTTCCGATGGCGGCCGGTGTCCCGCTCGGTCTCGCCAGAGAATCTTCCCGGCGAGGCGGAGCTTCCGGGGGTGGACGTGTTCATCTGCACGGCGGATCCGGCGAAAGAGCCGACGGTGGAGGTGATGAACACAGTGTTGTCGTGTCTAGCTCTGGATTACCCGGCGGAGAAGCTGGCGGTGTATCTATCGGACGACGGTGGGTCTCCGGCGACGTATTTCGGAGTAAAAGAAGCGGGATGGTTCGCAAAGACATGGGTTCCGTTCTGTAGTGAATACGGAATTAATTCAATATGTCCAGAAGTTTATTTCTCTTCGTTGGCGGACGAAGACAGGATTTTTCGAGATCCGAAATTCGTAGCTCAGGAAAAAGAAATTAAGAAAACATATGAAGCAATGAAGAAGGATTTGGAAAGATATGGAATGGAGAAAGATAAGAGTGACGTCGTTAAGGATCGTTCTGCTAGTGTGAAGATCATTCTCGACGGAAAAAACGACGGAAAAGGAGGATGCCGGCTGCCGTTGCGCGTCTATGTCTCTCGAGAGCGAAGACCGTCGGTTCCTCACCGGTACAAAGCCGGCAACATCAACAGCCTCGTTCGGGTCTCCGGATTGATCAGCAATAACCCTTATCTTTTGGTCTTAGACTGTGATATGCACTGCAATGACCCAACATCAGTTAAGCAAGCAATGTGCTTCTATCTCGATTCTCCCTTTTCCAAATCTCTGGGATATGTCCAGTTCCCCCAAATTTTCTACAATCTCAGTAAGAATGATATCTATGACAACCAAGCTAGACCTGCTTTCAAGACTAAGTGGATTGGAATGAATGGGCTAAGAGGGCCAGTGATGTCTGGAACTGGATATTTCTTGAGGAGGAAAGCGTTATTTGGGAGTCCTAATCAGGAAGAGAGGTTCTATGTGGAGCCACATAAAGTTTTTGGTCAATCTCAGAAGTTTATTGACTCAATGAAGATGGACAAGGAATATCCAATGGATGCGATGTTGAATGAAGCTGTAACTTTGGCCTCATGTTCTTATGAGGAAAACACTGAATGGGGCAAAAAGATTGGGTTCTCATATGACTGTTTGCTGGAGAGCACCTTCACTGGGTATCTGCTGCAATGTAAAGGATGGACTTCTGCTTATCTATACCCGAAGCGACCGTGCTTCCTTGGTTCCAGCCCTGTCGACATGAAAGATGCCATAATTCAAATGCTAAAATGGAGCTCTGAGTTATTCCAAGTTGGTTTCTCTAAGTATAGTCCTCTCATATACGGCATCTCGAGAATGTCCATTCTCCAAAGCATGTCCTACGCCTATTTTGCATTCTCTTCTTTGCTTTCAGTTGCTTTTGTCTTGTATGGGGTAATTCCTCAGTGGGGCTTCTTGAAAGGCATCCCCTTGTACCCAAAGCTTTCAGATCCATGGTTTGCTGTGTTTGTTGCCATATTCATTTCTTCCATTGTCCAACACCTGATTGAGGTGTTCTCAAGCGGTGGAAACTTGAAGACATGGTGGAACGAGCTGAGAATCTGGATGGTGAAGTCAGTTTCTGCTTGCTTGTTCGGGGTAGTAGATGCCATAATGAAGATAACAGGACTGAAGAAGATGGAGTTGAACCTAACAAACAAGGCAATAGACAAAGAGAAGCTCAAAAAATACGAGAAGGGTATGTTTGATTTGCAAGGAGCTACAATACTAATGGCTCCTCTGTTTGTCATAGCTCTATGGAATATGATTTGCTTTGTTGGTGGGATGAGGAAGGTGGTGAAGAACAGGAATTTTGAGGAGATGTTTGGGCAGATGTTTCTGCTATCCTTTGCTTTGGTTCTGCATTACCCTGTTCTTGTAGGGGTAATGAAAAGGAAAGGAAAATCTCACCACTGAGCACTCTTGCACCATCTCTTCAAGTCTTTCTATGAGACTGTGCTAATAGAGAGAGATATTATATATTGGTAATATTAGTAATGGTATGGTGTAGTTAGCTAGGGAGTCTTTTATAAATAGAGACTTAGGGTGTAGGAAATGGAGTGATATTTTGAGTGAGTCAGCCCCATAGCTAGGGAGCTGGGGAATGAAATAGCAAATGTTTCGAATTTCAATATATTTAGTGATATATAATCTCTGTTGGTGTGTTAA 2376 45.37 MNFPIQKMTFFSLHTLTLHRCTMAINRLHIHLHFTAVLLLLYYRTTALHRRNHHLLWSLLTLAELLFAFVWLLAQSFRWRPVSRSVSPENLPGEAELPGVDVFICTADPAKEPTVEVMNTVLSCLALDYPAEKLAVYLSDDGGSPATYFGVKEAGWFAKTWVPFCSEYGINSICPEVYFSSLADEDRIFRDPKFVAQEKEIKKTYEAMKKDLERYGMEKDKSDVVKDRSASVKIILDGKNDGKGGCRLPLRVYVSRERRPSVPHRYKAGNINSLVRVSGLISNNPYLLVLDCDMHCNDPTSVKQAMCFYLDSPFSKSLGYVQFPQIFYNLSKNDIYDNQARPAFKTKWIGMNGLRGPVMSGTGYFLRRKALFGSPNQEERFYVEPHKVFGQSQKFIDSMKMDKEYPMDAMLNEAVTLASCSYEENTEWGKKIGFSYDCLLESTFTGYLLQCKGWTSAYLYPKRPCFLGSSPVDMKDAIIQMLKWSSELFQVGFSKYSPLIYGISRMSILQSMSYAYFAFSSLLSVAFVLYGVIPQWGFLKGIPLYPKLSDPWFAVFVAIFISSIVQHLIEVFSSGGNLKTWWNELRIWMVKSVSACLFGVVDAIMKITGLKKMELNLTNKAIDKEKLKKYEKGMFDLQGATILMAPLFVIALWNMICFVGGMRKVVKNRNFEEMFGQMFLLSFALVLHYPVLVGVMKRKGKSHH 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 53316653 53322568 - XM_039020254.1 Bhi12g01650 53462

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01650 704 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 12 702 - -
Bhi12g01650 704 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 12 702 - -
Bhi12g01650 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 100 514 IPR029044 -
Bhi12g01650 704 Pfam Cellulose synthase 386 701 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bhi12g01650 704 Pfam Cellulose synthase 100 375 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bhi12g01650 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 197 381 IPR029044 -
Bhi12g01650 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 176 IPR029044 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01650 - - - bhj:120068467 1424.45
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01650 Bhi-Chr12:53316653 Bhi01g02984 Bhi-Chr1:74184365 8.72E-159 dispersed
Bhi12g01650 Bhi-Chr12:53316653 Bhi12g01651 Bhi-Chr12:53316653 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g639 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cme06g00522 . . . . . . . . . . . . . . . . . Bhi12g01650 . . . . . . . . . . . . . . Csa03g01243 Chy06g00496 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007282 0 2 0 0 0 1 0 1 1 1 1 1 2 1 1 0 1 2 0 1 1 2 1 2 2 3 3 2 0 4 36