Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01710 GTTAAGGATGGGAAAAAATAAAAAAGAAAAAAAAAGACTGCAAATTTTTATAATTGCTTTGGTTTTTAATAAAGTGGCGATGACGATCCTAACTAAGAGACTTGTGTCTGATCAGTTTCGTACGTCGGGGCATTTAGCGGGGAATTGAACCGAATTTCCGGCCATGGAATTCTAGAGCTTTCTATTGAGGTAAGATTCTTCCTATCTCCTTCACGGTGGGGTTGGTGGTTCCGTTTTGGAATTGGGAAAATCTTTAGAAAATTCGGATCTGTTTTGTTTCAGATCTGATAGGTTTTTCGTTGAGGGATTTCGGGGACAATCGAATTAGGGTTTGCTGTAGCTGGATTGTATTGGGTTTGTGTGAGCTCAATATGGGTATGGAGGAAGATTTTGTAATTTAGGGTTCTTGCGTTGGGGGTTGATTTAAATGGAAGACGGTGTGAGATCTGGGGGTCCGTCGGGGGTTTTGGTAAAGACTAGGAACTCGTCTGGTTGCTTAATTGTTAGAAAAAAAGAGGATGGATTAGGAGGCGCCGGTTCTTCGGGCTCACGTTTGCTTAATGCAAAGAAAGAGAAGAAGAGGCCTAGGTTGGTTTTGAGTGATTCTGGGTCCAGTGATGAGGTATTGTTGCCTCATCGTAGACGGGTTGGTCCTGAAACCATTCGGGTTTGTAATGGTTTGAATTCTTTTGGGAAAGATGTTGTGGACGAGAGTGGAAGTATCAGAAAGAAGGATAGATTGCAGTACGTTAAGCGAAATGATGATGGTTTACTCAACAGGATGGATGGAGATGGTCTACGAAGAAATATGGACACCTTAGATGTCTTTGAGTTCAATGAGTACGATGAAATTGATAGTGAGACTAGGCAGAGGAAGCACTTTAATGACAGTGGAGAAAGACAGTTTGTTGGTTCCATGAAACTGCCTCAAAGTGGCGTCAAGAGGGAATTTGGAACCTCTTCTAGCAAGCATGCTTTGGTGGACAAGAGAAAGCATTTGTATGCCGAACAAACCAATAGCTTTGATCGGGACAGGCCTCCCAGAAAGATTAATTATGAATCAGATAATGATGAACCTCACCTCCCAACACCCTTGTTGAGAGATAAGTTTAGGGGTCATTCCGATGAAGCAATCAGGGTTCAGGGGAAAAATGGAGTTTTAAAGGTAATGGTTAACAAGAAGAAAAATGTGAGCGGAGCTTCCAATATGTATGATCATCGCAAATTAGAAGAAAGTAGAAAGAGTTTAAGGACCGAAGATACTCTGAAGAGGAAAGTGTTAGTTTCTCCTTCACTCCACCCAGAAACTAAGCCCAATATGAAACAGGACCTCTTTTCTAAGCCAGAGAAAGACCATACAGAATTTCAAACTTCAGCATCAACAAAAAATGTAAAGGGTTGCAGTTGGGATTCAGGTGACAGCAGTGTGTCATTGAAGCCCAGAAAAAAGGTTGTTGAAGCTCACAAATCTACCAAGAAGGCAAGTTGTGAAGTTGAAAAAATTCCATGTGAAGAGACTCCCCCAAGTACAGCAAAGGAAGGAAAAGTAAAACGAGGCAGTGGAACAGAGAAACAAAAGCTACGTGAAAGGATCAGGGGAATGCTCCTTAGTGCTGGCTGGAAAATCGATTACAGACCCAGAAGGAACAGAGATTATTTAGATGCTGTCTATGTTAATCCCACTGGAACAGCTTATTGGTCAATTATTAAGGCTTATGATGCCCTTCAAAAGCAATTGAATGAAGAAGGAGCAGAGGCTAAACCTAGTACTGATGGTTCATTTACGCCAATATCAGATGACATTCTTAGTCAATTAACCAGGAAAACTAGAAAGAAAATTGAGAAGGAATGGAAAAATAAGCAGAGAGATGATAGTGACAGTGAAAATGCTAAAGAAGCAAGTGCACTAAGATCTGCTGGTACAAAAAATGACATGGACAGTATGGACAGTGACAGCAATGAAGAAAAGTTAAGCTCTTTCATAAAGCAGGGTGGAAAGTCTTTTAAAAATAAATTGAACGAGAATGGATTTCCCAGTGTCAACTCCAAAGGTCAAAGTTCTAGTAAGTATTCGCGTGATACCATTGTAAAATCTTCTTCTGGATCCAATTCACGTATTTTACATGGAAGAAGAGGTAGAAAGCTTGGACTGTTAGTTCGTGGCTCTAGTAGGGGATTAGATTCAGAGAATGATGGATATGTTCCATATACTGGTAAAAGGACTCTGCTTTCCTGGCTTATTGATTCCGGAACTGTGCAGTTGAGCCAAAAGGTTCGGTACATGAACCGCAGACAGACCCGGGTGATGCTGGAGGGGTGGATTACCAGAGATGGCATCCATTGCGGTTGCTGTAGCAAAATCCTCACTGTCTCAAAATTTGAGATACATGCTGGAAGCAAATTACGGCAACCTTTTCAAAACATCTTTTTGGAGTCTGGGGTTTCTCTTCTGCAGTGCCAGAGAGATGCATGGAATAGACAGGAGGAGTCTAAACGCCTCAGTTTCCACACAGTTGAAATTGACGGTGATGATCCAAATGATGATACATGTGGCATCTGTGGAGATGGTGGAGACTTGATCTGTTGTGATGGGTGTCCATCAACTTTTCATCAGAGTTGTTTAGATATTCAGATTCCTCCAGGTGATTGGCACTGCCCAAATTGTACTTGCAAGTATTGTGGAGTTGCCAGTGTTGATATTTCTCAAGGAGACAATACCGTTGTTCCTGAGATATCTACTTGCATGTTATGCGAGAAAAAATTTCATGAGTCCTGCATTCCAGAGATGGATACTCCTGATCATTCCAACACTTCAGTCACTTCTTTTTGTGGCAAGAGTTGCAGAGAGCTTTTTGAGAGTTTGCAGAAGCATCTTGGGGCGAAACATGAATTAGATGCAGGATTCTCATGGTCTCTTATCCGTAGAACAAGTGAAGATTCGGATGTATCTGTTCGTGGACTTTCTCAAAGGATCGAGTGTAACTCTAAACTGGCTGTTGCATTAACAGTTATGGATGAATGCTTTTTGCCTATTGTTGACAGGAGGAGTGGGATAAATCTAATTCATAATGTTCTTTATAACTGTGGATCTAACTTTTATAGGCTGAATTATAGTGGCTTCTACACTGCTATTTTGGAAAGGGGTGATGAAATCATCTCTGCTGCAACAATCAGGTTTCATGGGACTAAGTTAGCTGAAATGCCATTCATCGGTACCCGCCATATTTATAGACGTCAAGGAATGTGCCGTCGGCTCTTTTGCGCAATTGAATCTGCCCTCCGCATGCTTAAGGTTGAGAAACTGATTATACCAGCAATCGCTGAGCTCATGCACACTTGGAATGTGATTTTTGGCTTTAGTCCTTTGGAGCAGTCACTCAAGCAAGAAATGAGATTGATGAATATGTTGGTGTTCCCTGGAACAGATATGTTACAGAAGTTGTTAATCCAAGAGACAATTGTCGAGGAGAATACTTCTACTGGCTCAGGTGCAAAGCAAACGGATTGTAGAAGTACAGAGTTCAGTAGTCCTAAGATGGATACAGAGACCTCATCTGGCCATGAACCTCAAAGTTGTGATGACACCGAACAGCATCACTCTAAGGAGAAAACAAATGAAGCAGCTGTTACTAACCCGAATCCTGAATCCGTATCTGTTTCTCTAAATGATACTTCTGCGGCAAATAGTCCTCTGGATGTGTTTTGTGAAGGTAAACCGTCATGTTCTCCAATGCAAACCGTAAATTCAGATTCTGATTCTGGTGATAAAGTTAAATGTTCATCTCCATCTGATTCAACCGACTCTCTTCAATGGAAAAATAAGTCTGGAATTCAGCATGGTATAGAGGACCATTTGCAGTCCACTTCCCAATGTATGGAAGTTGATACATCTTCAGACAATTCTCTTGAACTTAAGGTTAAAGTTTCAGATGAAGGAATCATTTGTTCTAACTCTCATGCTGGGCACGAGTTGGCTGACTCCGTTTCTGAGAAGAAATATTTTCCTCCTGCAATAGGCTATGGCACCGATGAGTTTCTAAATGACATACCCGTAGTGGATTCTCCTGAAGATGATAAGTCATTCAATAAGATTAATGGTCATGAATTCCACGAGGACGATTCCCATGCTAATGCTCTTAAACCTGCTCATTCGGTTGAAAATTTTCCCAATGACAGTGAAAATCCACTTGTCTCTTCTGCTAGCTTGTGTGGCACTAATGGAGGCCCCTTTGAAACATCTGATTGTAAAAATGCAAGACCTTATGGTAAAGAAACTTTTTCTGACGGAATTTGTGACATTGAAAATTCTCCACAGGCATGTGGGGCAAAAGCCAGAGGTGATTCGCAGGAAGAGAGAGCTGAATCTGGTTCGGTTTGAAATTGCCTCCATGTTGATGTTTGATCTCCAAATTATCATGAAACCACTTTGCTGGTTTGTGCAGGGCTCTGTTGCTAAATGACTAGTGCTTAGATTTGAGATGAGTTGCAATAATTGATATTGCTATTTAACAGAATTTTGGCATTTAGATCACAATCCAACTTCTGTTCGTTAACACGATTTTTTCAGCCCTGGAGTTCACAGAGGTGCCCTTGAAGGAACTAGCATGGTTCAATTCACCATTTCTCTTCTGAAATTGCTGCTTTGAAACATGAACACATTCATTATGCTGGCTGGCTTGGAAGCTCAAACTTCATGGTATGGTCGAAACCTGGTTCAGGATCTCTCCAAACCATCATATTTTCTAGAAATGGAGCAGTTCCATTCTTGATCAGGGTCAGCTAATCTCTTGGAGCAAAATCTTCTTGTAGTTGTAATGATTGATCACACATGGTTCCAGCGCCAATTTGTCTCAAACATATCTGTTATCGTCTGCTCAGCCTATTCGACAACCACAACTGCGAGAGAGCCAGAGAATTAAAATAACTCTTGTGGCGTTTTCAAGTTCTCAAGGTTTTCTGGTCGGGCCTTTTAACAGAAATATATTGACATTCATTCGTATTACTCATAAGAATGGTATGACCACCCTCTGTTGTATAGGCTGTTTTGGTGGAATCTTCAAGCTTGTCAACTCAATTTGTCTTGAATTTTTGCTGCTGTCTGTGATGGGCATTGTCTAAGTTCAGAGCATTTTCTGGGAAGCTACTTCTCTGCCAACCATGAGAGCTTAGGGGGGTTGGTTTAACATGTGTGAAAGCAAAGGGTAAAAAATATAGTTTTTAGTGAGTTAGAAATGGGGAGTCCATTGTTTGCTAACTGTTATTATTGGAATTACTTGTTATATGAAGATGAAATTGTAATTATTTGGTGCACATGTATTTAGTTTGAAATACTGCCTGAAGGTTTTGCTCCACATTTTTCTCAACCCCT 5368 40.91 MEDGVRSGGPSGVLVKTRNSSGCLIVRKKEDGLGGAGSSGSRLLNAKKEKKRPRLVLSDSGSSDEVLLPHRRRVGPETIRVCNGLNSFGKDVVDESGSIRKKDRLQYVKRNDDGLLNRMDGDGLRRNMDTLDVFEFNEYDEIDSETRQRKHFNDSGERQFVGSMKLPQSGVKREFGTSSSKHALVDKRKHLYAEQTNSFDRDRPPRKINYESDNDEPHLPTPLLRDKFRGHSDEAIRVQGKNGVLKVMVNKKKNVSGASNMYDHRKLEESRKSLRTEDTLKRKVLVSPSLHPETKPNMKQDLFSKPEKDHTEFQTSASTKNVKGCSWDSGDSSVSLKPRKKVVEAHKSTKKASCEVEKIPCEETPPSTAKEGKVKRGSGTEKQKLRERIRGMLLSAGWKIDYRPRRNRDYLDAVYVNPTGTAYWSIIKAYDALQKQLNEEGAEAKPSTDGSFTPISDDILSQLTRKTRKKIEKEWKNKQRDDSDSENAKEASALRSAGTKNDMDSMDSDSNEEKLSSFIKQGGKSFKNKLNENGFPSVNSKGQSSSKYSRDTIVKSSSGSNSRILHGRRGRKLGLLVRGSSRGLDSENDGYVPYTGKRTLLSWLIDSGTVQLSQKVRYMNRRQTRVMLEGWITRDGIHCGCCSKILTVSKFEIHAGSKLRQPFQNIFLESGVSLLQCQRDAWNRQEESKRLSFHTVEIDGDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQIPPGDWHCPNCTCKYCGVASVDISQGDNTVVPEISTCMLCEKKFHESCIPEMDTPDHSNTSVTSFCGKSCRELFESLQKHLGAKHELDAGFSWSLIRRTSEDSDVSVRGLSQRIECNSKLAVALTVMDECFLPIVDRRSGINLIHNVLYNCGSNFYRLNYSGFYTAILERGDEIISAATIRFHGTKLAEMPFIGTRHIYRRQGMCRRLFCAIESALRMLKVEKLIIPAIAELMHTWNVIFGFSPLEQSLKQEMRLMNMLVFPGTDMLQKLLIQETIVEENTSTGSGAKQTDCRSTEFSSPKMDTETSSGHEPQSCDDTEQHHSKEKTNEAAVTNPNPESVSVSLNDTSAANSPLDVFCEGKPSCSPMQTVNSDSDSGDKVKCSSPSDSTDSLQWKNKSGIQHGIEDHLQSTSQCMEVDTSSDNSLELKVKVSDEGIICSNSHAGHELADSVSEKKYFPPAIGYGTDEFLNDIPVVDSPEDDKSFNKINGHEFHEDDSHANALKPAHSVENFPNDSENPLVSSASLCGTNGGPFETSDCKNARPYGKETFSDGICDIENSPQACGAKARGDSQEERAESGSV 1316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 55287222 55298457 - XM_039018648.1 Bhi12g01710 53522

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 472 489 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 1295 1316 - -
Bhi12g01710 1316 CDD PHD2_CHD_II 708 746 - -
Bhi12g01710 1316 ProSiteProfiles Zinc finger PHD-type profile. 705 749 IPR019787 -
Bhi12g01710 1316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 695 807 IPR013083 -
Bhi12g01710 1316 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 1 1217 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 490 504 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 1064 1079 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 362 382 - -
Bhi12g01710 1316 SMART PHD_3 707 747 IPR001965 -
Bhi12g01710 1316 ProSitePatterns Zinc finger PHD-type signature. 708 746 IPR019786 -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 1100 1128 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 368 382 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 472 565 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 440 459 - -
Bhi12g01710 1316 Pfam Tify domain binding domain 630 680 IPR032308 -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 193 226 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 28 61 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 1015 1079 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 515 564 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 1045 1063 - -
Bhi12g01710 1316 SUPERFAMILY FYVE/PHD zinc finger 696 752 IPR011011 -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 1015 1044 - -
Bhi12g01710 1316 MobiDBLite consensus disorder prediction 44 58 - -
Bhi12g01710 1316 PANTHER PHD FINGER FAMILY PROTEIN 1 1217 - -
Bhi12g01710 1316 Pfam PHD-finger 708 749 IPR019787 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01710 - - - cmo:103489665 2304.63
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g01085 Bhi-Chr9:25283839 Bhi12g01710 Bhi-Chr12:55287222 0 dispersed
Bhi09g01086 Bhi-Chr9:25283839 Bhi12g01710 Bhi-Chr12:55287222 0 dispersed
Bhi09g03499 Bhi-Chr9:88261980 Bhi12g01710 Bhi-Chr12:55287222 4.35E-121 dispersed
Bhi09g03500 Bhi-Chr9:88262562 Bhi12g01710 Bhi-Chr12:55287222 4.35E-121 dispersed
Bhi10g00826 Bhi-Chr10:16634748 Bhi12g01710 Bhi-Chr12:55287222 2.14E-89 dispersed
Bhi10g00827 Bhi-Chr10:16634754 Bhi12g01710 Bhi-Chr12:55287222 2.66E-89 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g496 . . . Bda08g00235 Bpe04g00832 . Bma04g00785 . Cmo08g01120 Cmo17g00223 . . . . . . . . . . . . . . Cla06g00583 Cam06g0621 Cec06g0623 Cco06g0629 Clacu06g0608 Cmu06g0601 Cre06g1369 Cone14ag0851 . . . . . . . . . . . Bpe05g00903 . . . Sed09g1123 . . Cma08g01143 Cma17g00236 Car08g01026 Car17g00215 Cpe12g00199 Cpe17g00147 Bhi12g01710 Tan06g0978 Cmetu01g0849 Lac12g2278 Hepe03g0198 . Lcy13g0282 . . . . . . . Lsi09g01321 . . Cme01g01562
Vvi7g89 . . . Bda10g00577 . . . . Cmo08g00335 Cmo17g01163 . . . . . Cpe17g00858 . . . . . . . . Cla09g00660 Cam09g0695 Cec09g0686 Cco09g0684 Clacu09g0704 . Cre09g0673 Cone17ag0558 Cone20ag0858 . . Lsi02g02282 Csa07g01711 . Cme01g02078 . . . . Bpe10g00402 . . . Sed09g1123 . . Cma08g00340 Cma17g01186 Car08g00305 Car17g01118 . Cpe12g01032 Bhi12g01710 Tan06g0978 Cmetu01g0849 Lac12g2278 Hepe03g0198 . Lcy13g0282 . . . . . . . . . Chy01g01576 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006686 1 1 2 1 2 1 2 1 1 1 1 1 2 1 1 3 1 2 2 1 1 1 1 1 1 1 1 1 1 1 38
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2695 PF16135 TDBD 4.00E-22 No_clan Bhi TR