Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01765 TGAAAATGGCGATTTGAATTCATGCCGACCACTACTCTCCCTCTCCCTCTCCTTCTCGGCTCAAAATTGCTTTCTGAATCCTTCGTTGTTCATCGATTCTAATAAACTTCATGGAAAATGATCAAGAATCTTCTGCTTCTTCTTCCAGGCAACTTCTCTTTTTTCCATTTCTTTCCTTTTTCACCTTTCGCGATGTAAAAATGTGTCAGATCGTTTGATTGTGTTTGTCACGTTTGAAATTTTGATTTCGTAATGGCTGTTATTGTTAGGTTTCTGTTTGCATTTTTTTTAAAGGAGCGATGTGATTGTTATCTGTTGATTCCAGTTGTTGCGCAATAATTAATCAGGTTTAGAAGTAAGGATTGAAACGATTAAGTGTGCTTGAGATTGATTACTAGTTGTTGTTTTCCGAAGTAGTAAGATGTGGAAATGTATGAGATCATTTGATTCTGTAGCTGATTTTAACGTGCAGAATTTTGATTTCGTGATGGATTATTAGGTTTCTGTTTGCATTTTTTTTTCAAAAAAAGATTGGAGGCGATATGAATGTATCTTTGGATTTCAATAGTTGCGGAATGATTAATCAAGTTTAGAAGTAGGATTGAAATGATTTGACTGTGCTTGAGCTTGACGAGTTGTTGTTGATGTTGTTTTTCGAAGTATTAAGTCAAGCGAGCGAACGTTACAACGATCGAAGATGTTGGAAGCTTCAATCATAGAGAAATTGGATCAGCAAAACTCTGCGGATCTGGCTGGATGCGGTCCGACTGAAATTCAAACGTCCGGAAGCGACGATTCAAGCGATATTGATAGTCAAAATCAATCAAAAGATCAGACAAATCAAGCTGTGGGGACTCCCAAGTTAGGGAACAGATCAAGACCGCGTGGATTCTCCGACTCTTTTGCTTCTCATGAGTTGAGATTGTTTGATTTGGAAGATGAAACCAAAGATGAGTCATCTCCAAGAGGGGTGCTCGAGGACTGCTCAAGAAGTTTAGATTCTGAAACAACTACTTCCCGGGCCAGCACTTCCGATTGGGAAGGTCATCCGGACTCGAGAAATCCAAGTCATTGGAGAGGGTTTTTTCGTTTACTGAAGAAAGGACCTCAAATGCGATTTCAGACCTTTCCTCCTCTTAAAGCTGTTCCAAAACTCACCAGAAGAAAGAGCAAAAGAATTAGAGAGGATATGATTCCGGTAGTATCGCCAGTGATGGACTCTTCTATAGAGACAGAGTTTTGCTATTTCAGATCTTCTTGGAAGAATTTCACACTTTCAGAGCTGCAAGCTGCAAGCAATAACTTCAGCCAAGAAAACTTGATTGGCGAGGGTGGTTATTCTGAAGTTTATAAGGGTCAGCTGGAAGATGGGCAACTAGTTGCGATCAAGCGGCTTAATAGAGGTAGCCAAGAAGAGATGACTGCAGACTTCTTGTCTGAGCTCGGAATTATTGTTCATGTCGATCATCCTAACATCGCAAGTGTAATTGGGTACGGCGTTGAAGGGGGAATGCACCTTATACTTCATTTATCACCCCATGGGAGCCTGGCATCCATACTTTATGGGCCAAAAGAGAGATTGGATTGGTCAACCAGGTATAAGATTGCTCTAGGAATTGCTGAAGGCCTCCTGTATCTTCATGAAGGCTGCCAAAGAAGAATAATCCACAGAGACATTAAGGCCGCTAATATATTGCTTAGAGATGATTTTGAGCCTCAGATATCCGACTTCGGGCTTGCAAAGTGGCTCCCAGATCAATGGACTCACCATACTGTGTCAAAGTTTGAAGGCACATTCGGGTACCTTCCTCCTGAGTTCTTTATGCATGGCATTGTTGATGAAAAAACTGATGTCTATGCCTATGGAGTACTTTTATTGGAACTCATTACCGGACGACGAGCACTGGATAGCACACAGCAAAGCCTTGTGATGTGGGCTAAACCTCTACTTTCTAAGCAGAATTTCAAGGAACTTGTTGATTCATCTCTTACTGACACATTTGACACCGAGCAAATGAAACGGATGGTGACAATAGCTTCAATGTGCATAAATCATTCTTCAATTCAACGGCCGGAAATGAGTGAGATTGTTCAGATTATGAAAGGGGATGGAGTTGGTAATTTGGAGCTTGTAAAACGACAGAAGTCTAAACTTCAAAGGACTTACTCTGAGGAGCTTTTGGATGCAGAAGAATACAATTCTACAAAGTATTTAAGTGATATTGATCGACATTTGGAGGTTGTTTTAGGAACTTGTCATATCGACGTTTAGATTATTTATTATCACATAAACTTACACGATATAATTTATATATGATATTTATGCATTTATACTCGATCATTAATATATGGATCCTGATGTTTCAATTTTGTGATTTGAAGGTTTTTTTTTTTTTTTTTTTTTTTCCGTTTTAAATATACCATTTTATGTATTGTAGATCTTGTATTCATTCGAGAAAACAG 2463 39.1 MLEASIIEKLDQQNSADLAGCGPTEIQTSGSDDSSDIDSQNQSKDQTNQAVGTPKLGNRSRPRGFSDSFASHELRLFDLEDETKDESSPRGVLEDCSRSLDSETTTSRASTSDWEGHPDSRNPSHWRGFFRLLKKGPQMRFQTFPPLKAVPKLTRRKSKRIREDMIPVVSPVMDSSIETEFCYFRSSWKNFTLSELQAASNNFSQENLIGEGGYSEVYKGQLEDGQLVAIKRLNRGSQEEMTADFLSELGIIVHVDHPNIASVIGYGVEGGMHLILHLSPHGSLASILYGPKERLDWSTRYKIALGIAEGLLYLHEGCQRRIIHRDIKAANILLRDDFEPQISDFGLAKWLPDQWTHHTVSKFEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRRALDSTQQSLVMWAKPLLSKQNFKELVDSSLTDTFDTEQMKRMVTIASMCINHSSIQRPEMSEIVQIMKGDGVGNLELVKRQKSKLQRTYSEELLDAEEYNSTKYLSDIDRHLEVVLGTCHIDV 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 56986514 56991578 - XM_039019708.1 Bhi12g01765 53577

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01765 524 MobiDBLite consensus disorder prediction 1 67 - -
Bhi12g01765 524 MobiDBLite consensus disorder prediction 98 113 - -
Bhi12g01765 524 Gene3D Phosphorylase Kinase; domain 1 168 277 - -
Bhi12g01765 524 PANTHER OS08G0249100 PROTEIN 48 506 - -
Bhi12g01765 524 ProSiteProfiles Protein kinase domain profile. 203 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01765 524 SMART serkin_6 203 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01765 524 Gene3D Transferase(Phosphotransferase) domain 1 280 486 - -
Bhi12g01765 524 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 48 506 - -
Bhi12g01765 524 SUPERFAMILY Protein kinase-like (PK-like) 183 467 IPR011009 -
Bhi12g01765 524 ProSitePatterns Protein kinases ATP-binding region signature. 209 231 IPR017441 GO:0005524
Bhi12g01765 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Bhi12g01765 524 Pfam Protein tyrosine and serine/threonine kinase 206 467 IPR001245 GO:0004672|GO:0006468
Bhi12g01765 524 MobiDBLite consensus disorder prediction 8 55 - -
Bhi12g01765 524 MobiDBLite consensus disorder prediction 80 121 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01765 - - - csv:101216575 966.837
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01708 Bhi-Chr6:48333114 Bhi12g01765 Bhi-Chr12:56986514 0 dispersed
Bhi06g01709 Bhi-Chr6:48334237 Bhi12g01765 Bhi-Chr12:56986514 0 dispersed
Bhi10g00497 Bhi-Chr10:11167248 Bhi12g01765 Bhi-Chr12:56986514 7.09E-147 dispersed
Bhi10g00498 Bhi-Chr10:11167250 Bhi12g01765 Bhi-Chr12:56986514 1.94E-166 dispersed
Bhi11g00889 Bhi-Chr11:27489795 Bhi12g01765 Bhi-Chr12:56986514 9.36E-151 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g390 . Blo12g00063 . . Bpe04g01182 . Bma04g01062 . Cmo08g01162 . . . . . . . . . . . . . . . Cla06g00524 . . . . . . . Cone15ag0801 Cone7ag0189 . . . Chy11g01451 . . . . . . . . . . . . Cma08g01190 Cma17g00290 Car08g01067 Car17g00266 Cpe12g00242 Cpe17g00108 Bhi12g01765 . . . . . . . . . . . . . Lsi09g01380 . . Cme11g01956
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009081 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 1 1 1 2 1 1 1 1 1 0 1 1 2 1 1 33
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88531 PF07714 PK_Tyr_Ser-Thr 7.50E-43 CL0016 Bhi PK