Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01818 AAGAACTGAAGAAAGCTCAAAAAAATCTTTACCATCTTACTCTGTCTTCTCAATCTCAACCTAACGACGTTTTTCTTCAAAATTCACAGGTAATTGAATTGAAACTCCGCACACAAATTGGATTTCACTTTCGTTCATACAGAGTCCCATAAATTCACGATTCCGATTCCCAAGAAGATACATATTCAACTGCTGCATACCATATATATATATATATATATATATATTCCTTTGTGTCACTTTCATTCGATTCCTACCTGCAATCGGATCACCATAGTACTTCCTTCAATTCCTTGTTGCCGCTTTCATGATTTAATTTCACTCAACACCCATTCGTCTCTCTCTGCCCTTTTTTCCGGTGGGTGGGAATTGGGATGGATCTGGAATCTTTGTCGGAGGCAACATCCGGAGCCATTGGGTCTCTGGTGAGTACCACTGTTTTATATCCTCTTGATACTTGCAAAACTAAGTATCAAGCTGAGAATCAGTCTCAACATCAGCGGAAGTACAGAAACATATCCGATGTGCTGTGGGAAGCAATTTCAACTGGTCACGTGGGTTCATTATATCAGGGTCTTGGCACAAAAAACTTCCAGTCCTTTATTTCATCGTTCATCTACTTCTATGGATACAGCTTTTTAAAGAGAATCTACTTGAAGAGAAGTGGGAATAAAAAGATTGGAACAAAAGCAAATCTGATGGTTGCTGCAGCAGCTGGGGCCTGTACGGTTGTATTGACACAGCCTTTGGATACAGCATCCTCTAGGATGCAGACAAGCGAGTTTGGGAAGTCCAAAGGACTCTGGAAGACACTCGCGGAGGGTACCTGGAGTGAAGCATTTGATGGTCTCGGAATATCCCTTCTTTTGACATCAAACCCATCTATTCAGTACACCGTGTTTGATCAACTGAAACAAAGGTTACTCAGGACTCAACTGACGCATGAATCGGGTATAGAGTCATCCCCAGAAGCTCTCTCGGCCTTTTTTGCTTTTGCGCTTGGCGCCCTCTCGAAATGTGTTGCTACAATCTTGACATACCCTGCTATCAGGTGTAAGATTGTGATCCAGGCTGCGGAATCAGATCAAGAAAGGAACAAGGACAAACAACAGGACGATAAAAAAACCATCTCGGGTGCACTTAATACTATTTGGAAAAGAGAAGGTTTGCTAGGATTTTTCAAAGGATTAGAAGCGCAAATACTGAAGACTGTGTTGAGTTCTGCATTACTTTTGATGATAAAAGAGAAGGTGGCAAAGACCTCTTGGATCATATTGCTTGCATTTAGAAAGTATCTCTTTGTTACCAATACAAGATTAAAGGGTGCTTGAGTTTAAGCATTAGGCTTAAATTTTTTAGGCGATATCTAAGATTTGATATAGTCCCAATTGGATTTCTGCAACCTATGAAGGAAAACAGAGTTTCTTTTTATTCAGTTTGTTGCATGGTATGCTGTATGAGTTCAATAACTTTACATTTATCTA 1484 40.09 MDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAENQSQHQRKYRNISDVLWEAISTGHVGSLYQGLGTKNFQSFISSFIYFYGYSFLKRIYLKRSGNKKIGTKANLMVAAAAGACTVVLTQPLDTASSRMQTSEFGKSKGLWKTLAEGTWSEAFDGLGISLLLTSNPSIQYTVFDQLKQRLLRTQLTHESGIESSPEALSAFFAFALGALSKCVATILTYPAIRCKIVIQAAESDQERNKDKQQDDKKTISGALNTIWKREGLLGFFKGLEAQILKTVLSSALLLMIKEKVAKTSWIILLAFRKYLFVTNTRLKGA 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 58023333 58026773 - XM_039020214.1 Bhi12g01818 53630

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01818 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 3 92 IPR018108 -
Bhi12g01818 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 182 IPR018108 -
Bhi12g01818 318 Pfam Mitochondrial carrier protein 202 295 IPR018108 -
Bhi12g01818 318 Pfam Mitochondrial carrier protein 102 184 IPR018108 -
Bhi12g01818 318 Pfam Mitochondrial carrier protein 5 96 IPR018108 -
Bhi12g01818 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Bhi12g01818 318 SUPERFAMILY Mitochondrial carrier 6 292 IPR023395 -
Bhi12g01818 318 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Bhi12g01818 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 1 317 - -
Bhi12g01818 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 201 296 IPR018108 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01818 - - - csv:101217653 543.117
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01909 Bhi-Chr5:59554913 Bhi12g01818 Bhi-Chr12:58023333 4.53E-159 dispersed
Bhi12g01818 Bhi-Chr12:58023333 Bhi03g00908 Bhi-Chr3:17148192 1.67E-22 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g454 . . . . . . Bma04g01199 . . Cmo17g00246 . . . . . . . . . . . . . . Cla06g00557 Cam06g0598 Cec06g0596 Cco06g0603 Clacu06g0584 Cmu06g0579 Cre06g1345 Cone14ag0831 . . . . . . . . . . . . . . . . . . . Cma17g00259 . Car17g00233 Cpe12g00215 . Bhi12g01818 . . . . . . . . . . . . . Lsi09g01342 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001531 4 2 2 4 2 2 3 2 2 2 2 2 3 2 2 3 2 4 3 2 2 2 2 2 2 3 2 2 3 2 72