Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01821 AAATTTTGATTTAGAGCGATGTGGGAGTTGCGACCATTTCAAAGCGACCTTCTCGCGAAAGCCCCAGGGCCAGGCAAATCTGTTTCCTCACAGGGGAGAGAGAGCGATGACGATGGCGATACCAGGGAACATTGTCGTTGTTCTTCTCCTTATGTTGCTTCTCATCATCCTCCTCCTCCTCATTGCCTGCAAACCATGGCGTTTCTTTTCTTATTCCCGTTCTCGCACTATCAAGGTTCCTGACCTCGAGAGACCTCTCGTCTCTGATGCTGCGGATGACACTCAAAACCAATCCAGTGAGCTTCCCAGAGATTATGATCTAGAGGGCGCACTTCAAACTGATGGACATTTTCGGTCCCCAAGACTACATGGTCTGAGTCATAAACAAAGACTGCCACCTTTATCTCCCCATTTAAGTCAGGGTGATAGATTGGTTCCAGATGTAGCTCCTGATCCTTTAGAAGTTATTTCAGTTGGTCAAACCCTTAAACGTACTTACTTTGCAAACCAGATTCCAGAAGTTCAAAAACATGCAAAACTGAGCCCAGGAAGTGATCAACTCCACGAAATTGCAAGTCAAGATATCTCACATGGAAGAAGTTACCTCACTTTGGAGGTCACCTCCGGTCCTTCTCGTGGACTGCATTATTCAATACATTCTGCAAGCACGTCTGGGCTCCCATTGACTCTTGGAAGAGTATCTCCTAGTGATTTACAGCTGAAAGATTCAGAAGTCTCAGGGAAGCATGCCTTGATAAAATGGAATCCAAATAATATGAAATGGGAGCTTGTGGACCTGGGTAGCTTAAATGGGACCTTATTAAATTCTAGACCAATCAACAATCCTGACTCTGGAAGTAGACATTGGGGTGACCCAGTTGAGCTTGCAAGTGGAGATGTTATAACTCTTGGTACAACCTCCAAAGTGTATGTTCATATTACATCTCAGATTGAGAACCATATTCCCTTTGGAGTTGGTTTGGCATCAGATCCAATGGCTTTACGTCGAGGTGGAAAGAAGCTTGCCATGGAAGATGTTTGCTATTATCAATGGCCTCTTCCTGGGGTTGATCAGTTTGGAGTTTTTGGTATCTGCGATGGACATAGTGGAGTAGCGGCTGCCAAATCTGCTAGCGAGATGCTACCGGAGAAGGTTGCCACAATTCTATCTGATCCACTGAAAAGGGAGAGGGTAGTAGCTCTTCGTGATGCTTCAGATGTTCTTAGGGAAGCATTTTCTCAGACTGAAGCTTGCATGCATCACTATTATGAGGGTTGTACAGCCACGGTGCTTTTAGTTTGGGCTGATGGTGATGAAAATTACTTTGTGCAATGTGCGAATGTTGGGGACTCTGCTTGTGTTCTGAATGTTCATGGGAAGCAGATGAAGATGACAGAAGATCACAGAATTACTAGTGATTCAGAAAGACTCCGAATAGAACGAGCAGGAGAACCATTGAAAGATGGAGAGACACGTTTGTGCGGCTTGAACCTTGCAAGGATGCTTGGTGACAAGTTTCTTAAACAACAAGACCATCGTTTCAGTTCAGAACCTTATATAAGTGAAGTTGTCCACGTAGATCAAGGAAGCAAAGCTTTTGCAGTGATGGCAAGTGATGGCTTTTGGGATGTGATTGGTGTGAAGAAGGCAATTCAGCTGGTCCTTCAGGCTAGGGAGAGATACTCCATAAGTGCAGAAAATTCAGCGGAAAAGGTTGCGAATTTTTTGTTGGGGGAGGCTAGAACACTGCGTACAAAAGATAATACAACCATAATTTTCTTAGATTTTGAGGTTTCTTCTCATAGAATCACTTGTAAAGTTGAACCATAAATAAATTATGTATTACAACAACAAATGTTATAGCAGCATCTTACTTAGTAATGGTTATTACATTTTGCCTAA 1903 43.35 MTMAIPGNIVVVLLLMLLLIILLLLIACKPWRFFSYSRSRTIKVPDLERPLVSDAADDTQNQSSELPRDYDLEGALQTDGHFRSPRLHGLSHKQRLPPLSPHLSQGDRLVPDVAPDPLEVISVGQTLKRTYFANQIPEVQKHAKLSPGSDQLHEIASQDISHGRSYLTLEVTSGPSRGLHYSIHSASTSGLPLTLGRVSPSDLQLKDSEVSGKHALIKWNPNNMKWELVDLGSLNGTLLNSRPINNPDSGSRHWGDPVELASGDVITLGTTSKVYVHITSQIENHIPFGVGLASDPMALRRGGKKLAMEDVCYYQWPLPGVDQFGVFGICDGHSGVAAAKSASEMLPEKVATILSDPLKRERVVALRDASDVLREAFSQTEACMHHYYEGCTATVLLVWADGDENYFVQCANVGDSACVLNVHGKQMKMTEDHRITSDSERLRIERAGEPLKDGETRLCGLNLARMLGDKFLKQQDHRFSSEPYISEVVHVDQGSKAFAVMASDGFWDVIGVKKAIQLVLQARERYSISAENSAEKVANFLLGEARTLRTKDNTTIIFLDFEVSSHRITCKVEP 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 58131783 58138062 + XM_039020334.1 Bhi12g01821 53633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01821 574 Pfam FHA domain 194 269 IPR000253 GO:0005515
Bhi12g01821 574 SUPERFAMILY PP2C-like 302 561 IPR036457 -
Bhi12g01821 574 Gene3D - 296 564 IPR036457 -
Bhi12g01821 574 SMART FHA_2 192 244 IPR000253 GO:0005515
Bhi12g01821 574 Pfam Protein phosphatase 2C 301 554 IPR001932 -
Bhi12g01821 574 ProSiteProfiles PPM-type phosphatase domain profile. 289 561 IPR001932 -
Bhi12g01821 574 CDD PP2Cc 301 561 IPR001932 -
Bhi12g01821 574 Gene3D - 161 295 - -
Bhi12g01821 574 PANTHER PROTEIN PHOSPHATASE 2C 35 572 IPR015655 GO:0004722|GO:0006470
Bhi12g01821 574 SUPERFAMILY SMAD/FHA domain 166 277 IPR008984 GO:0005515
Bhi12g01821 574 SMART PP2C_4 283 559 IPR001932 -
Bhi12g01821 574 ProSiteProfiles Forkhead-associated (FHA) domain profile. 193 244 IPR000253 GO:0005515
Bhi12g01821 574 CDD FHA 167 275 IPR000253 GO:0005515
Bhi12g01821 574 PANTHER PROTEIN PHOSPHATASE 2C 70 35 572 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01821 Bhi-Chr12:58131783 Bhi09g03047 Bhi-Chr9:78889607 4.19E-19 dispersed
Bhi12g01821 Bhi-Chr12:58131783 Bhi07g00541 Bhi-Chr7:22345874 1.39E-16 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01821 K01090 - csv:101217195 1025.0