Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi12g01841 | AGATTTTGTTTGCTTTCTCAAATCTCTCTTCCTTCCCTTCGTAAAGCAAAATCAGCCCATTATCCACCACTCGTCTGTTAATCACAAACACACAGAAGAGAGAGAAAACAAAACAAAGAAAAAACAGAGTAAAAAGGAGCTTCTTCTTACCCTAGAAATATGTATTCTGATAAAGACTTGTGCTCAGTGATTCCGTATTGAATTATTACCTTCTGGGTTTTTGTAGTAATTGCTCTTCTTCAATGGTAGTAGTAGTTGCTGTTGTTCTTCCTCTTAGAACCTGAAGCCTATTTTTCTTGAGATTTCAAGTTAAGTACCATAAGAAACTAGATGGATCGAAGGGATCCGATGGCGTTATCGGGGTCGCAATCGTTCTATATGCAGAGAGGAATTAGCAACTCTGGCTCTGGTGCACAGGGTTTGCGTTCCTCTACTAACCCAAATGTGGCATTTCAAACCAACACTGGAGGCAACAATGTTGGATCAGGGTTGCCAATGGACCCTAACCCTGCCATTTCACCTTATGGTGGCAATGTAGGGGCTCAATCTGGTGGAGTGGTTGCCAGTGAGCCGGTGAAACGCAAGCGAGGCCGACCTCGCAAGTATGGAACTGAAGGGACTGTGTCTTTGGCACTGTCTCCCTCTCCTTCTGCTGTCAATCCAGCCACTGTAGCTTCTTCCCCGAAGCGGGGAAGGGGACGGCCTCCCGGGTCTGGAAAGAAGCAACAATTGGCTTCTCTTTGTGAAACACTTTCTGGATCAGCTGGCATGGGCTTTACTCCACATGTTATCACCATTGGAATAGGAGAAGATGTTGGTGCCAAGATTATGTCATTTTCACAGCAGGGACCAAGAGTTGTATGCATCTTGTCAGCAAATGGTGCCGTCTCCACTGTTACTCTTCGTCAGCCTTCGACTTCAGGAGGCACGGTCACATATGAGGGTCGTTTTGAGATAATATGTCTGTCAGGCTCATATGCCCTTGGAGAAGTTGCTGGTTCTAGGAACCGCACTGGTGGTCTGAGTGTTTCCCTTGCTAGCCCTGATGGGCGTGTTATCGGTGGTGGAGTAGGAGGAGCACTTATCGCAGCAACCCCGGTTCAGGTGATAGTAGGGAGCTTCATGTGGGGCAGTTCAAAGTCAAAGTACAAGAAGAGGGAAGCTGTTGAAGGCGTGATTGACTCAGATCATCAGTCAGTAGATCATGCAGTAGCAATTGCGAACGTGCAGCAGAATCAGAATCTGACTCCGACGTCGTCGGTTAGTATGTGGCCGTCCTCGCAGTCTCTGGACATGCGCAATGCGCACATTGACATTGATCTGATGCGCGGTTGAGAGCAGTTTAGTTGGTAATTGTCCCACATGTCTTGAGTACTTGTGAAGTCTGTTAGGTTAATTTAAGTGAGATTGAGTTTGGATTTATGTTGCTGTGGTTAGATCCTGATTATTGACATTCTAATTTGTAGTTTATGCTTTTTTTTTTGGTAACCAATGAACATGAATCCAAGTCTGGCTTTCTGAAAA | 1524 | 45.67 | MDRRDPMALSGSQSFYMQRGISNSGSGAQGLRSSTNPNVAFQTNTGGNNVGSGLPMDPNPAISPYGGNVGAQSGGVVASEPVKRKRGRPRKYGTEGTVSLALSPSPSAVNPATVASSPKRGRGRPPGSGKKQQLASLCETLSGSAGMGFTPHVITIGIGEDVGAKIMSFSQQGPRVVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEIICLSGSYALGEVAGSRNRTGGLSVSLASPDGRVIGGGVGGALIAATPVQVIVGSFMWGSSKSKYKKREAVEGVIDSDHQSVDHAVAIANVQQNQNLTPTSSVSMWPSSQSLDMRNAHIDIDLMRG | 334 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 59109327 | 59114609 | - | XM_039018776.1 | Bhi12g01841 | 53653 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi12g01841 | 334 | SMART | AT_hook_2 | 119 | 131 | IPR017956 | GO:0003677 | |
Bhi12g01841 | 334 | SMART | AT_hook_2 | 83 | 95 | IPR017956 | GO:0003677 | |
Bhi12g01841 | 334 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 149 | 274 | - | - | |
Bhi12g01841 | 334 | MobiDBLite | consensus disorder prediction | 11 | 52 | - | - | |
Bhi12g01841 | 334 | MobiDBLite | consensus disorder prediction | 98 | 114 | - | - | |
Bhi12g01841 | 334 | Gene3D | - | 151 | 283 | - | - | |
Bhi12g01841 | 334 | CDD | DUF296 | 150 | 264 | IPR005175 | - | |
Bhi12g01841 | 334 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 151 | 264 | IPR005175 | - | |
Bhi12g01841 | 334 | PRINTS | AT-hook-like domain signature | 83 | 93 | IPR017956 | GO:0003677 | |
Bhi12g01841 | 334 | PRINTS | AT-hook-like domain signature | 117 | 128 | IPR017956 | GO:0003677 | |
Bhi12g01841 | 334 | ProSiteProfiles | PPC domain profile profile. | 145 | 286 | IPR005175 | - | |
Bhi12g01841 | 334 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 28 | 325 | IPR039605 | GO:0003680 | |
Bhi12g01841 | 334 | MobiDBLite | consensus disorder prediction | 1 | 134 | - | - | |
Bhi12g01841 | 334 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 28 | 325 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi10g00097 | Bhi-Chr10:2180845 | Bhi12g01841 | Bhi-Chr12:59109327 | 6.45E-35 | dispersed | |
Bhi11g00147 | Bhi-Chr11:3375138 | Bhi12g01841 | Bhi-Chr12:59109327 | 1.31E-55 | dispersed | |
Bhi12g00246 | Bhi-Chr12:7653795 | Bhi12g01841 | Bhi-Chr12:59109327 | 3.44E-88 | dispersed | |
Bhi12g00573 | Bhi-Chr12:18064211 | Bhi12g01841 | Bhi-Chr12:59109327 | 7.29E-58 | dispersed | |
Bhi12g01841 | Bhi-Chr12:59109327 | Bhi12g01842 | Bhi-Chr12:59109327 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi12g01841 | - | - | csv:101203138 | 620.542 |