Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01859 AGAAGATGTGGTTTATGTGGCTGTGGGAAATGATATAAAGGCGTGTAAATTGAATTTGGTCTATGCTATAAAGCAATCAGGTGGGAGGAAGATTTGTATCCTTCATGTTCATGAGCCAGCAAAGTTGATTCCAATCTGCTCGGGCAGAGAAACTTTATTTTGAATCTGACAAAATTAAGAAGGGAATTGTGGAGCTTGTCTCCCTTCATGGAATTAGAAGGCTTATTATGGGTGCAGCAGCGGACAAGTATCACTCAAGAAAAATGACAAAAATCAGGTCGAGGAAAGCTATGTATGTTCACCTGAATGCACCAGCTTTCTGTCAAATTCAATTTGTTTGCAACGGGCAGCTAATTCGCATTAGGGAAGCTTGTCCACAAGAACCTCATGCAGATATCTCACTGCCATCACCTCAGTCACAGAACATCAACGGGGCAAGTTGGAGACCAGTGCAGTCTGGCCAATTTAATGGGAGAATAATAGACAGTCCATCAATTGGCATGGAAAGGCTTACAATTTCAGATGCCATTTTGAATACTAGTGGGACTTGGAGCGCTTTTGAGCATTCATATTCAACAAGTCCATCCAGTGGGTGTATGGATGTTGCATCTTCAAGGACTGAGGAAGATGAGTTTGAACTAGGATTAGATTCTCCTCGTCAGTTGACTAATTTTGCTCCCAACTCATCTCCTCCACATTTGTTGGGATTCCAGCAAGATGGAAGTGCTGATGATAGTCTTTATATTCAACTTGAAAAGGCGATAACCGATGCAGCAAATGCCAGGCGAGAAGCCTTTAGAGAGGCATTGAAGCGAGCAAAAGCTGAAATAGAACTTGGCCATGCTATTCGCAGGGCTAAAGTTGCTGAAGCCTTGTATGCTGAAGAGTTCAGAGGAAGGAAGGAAACTGAAGAAGCACGGTCAAAAGAAAGAGAAGAACTTGACGATGTGAAGAACCAAGTAAATGAAATGACGAAGGAGCTCCAAATTGCTCGAAACAAGGGATTAAAATTAGAAAACCAAATTGCAGAATCTGATGAGATGGTGAAGGAGTTAGAGCAGAAGATTCTCTCAGCCATAGAACTGCTGCATAATTACAAAAATGATCGAGATGAGTTGCTGAAGCAACGAGATGAAGCACTCAAAGAATTGAATGACATAAGGACGAGACAAGTAGAGGCCAGAATTCAACATAGTGCTCATGAGTTCTCATTCTCAGAAATTGCAGAAGCGACTCGGAAATTCGATCCCTCCCTTAAGATTGTAGAGGGTACAAATGGAAGCATGTATAAAGGTCTGCTGTATAACACTGAGGTTTCCATTAAAATGCTCTGTTCTCATAACTTGCAGAATCCAGAAGACGAGTTTCAACGTGAGGTTGATGTATTGAGTAAGCTGAGACATCCCAATATTGCCACACTCATTGGAGTCTGTCCGGAGGCTTGTATTCTTGTCTATGACTATTTTCCTAATGGAAATTTAGAAGATAGGCTAGCTTGCAAGGACAATTCCTCTCCATTATCATGGAAAACTCGGATACGTATCGCTACAGAGTTATGCTCGGCTCTTATATTTATTCATTCGAATAAAGTTTGCAAGATCATTCATGGTGACATGAAGCCTTCAAATGTACTATTAGATGCAAATTACGTTCCTAAACTTGCCGGATTTGGAACTTGTCATTTTTTGCCTCATGATGAAAAGTCAAGTTACAATGAGGATTTATCTGCCGGATATGATGCGAAAGGCAATCATGAATTCCCTCTCACAACAGAATTAGATGTTTTTTCATTTGGCATGATATTGTTAAGTTTGTTAACTGGACAATCATACTTGAGATTGAAAGAAGATGTCCAGTTCATCATAAACATAAAGAAACGAAAATTGAAAGATGTTTTGGATCCACGAGCAGGGGACTGGCCATTCGTGCAGGCTGAACAGTTGGCCCAGTTGGCATTGAGGTGTTGCAATACAAATAGTATGTACAGGCCAGACCTTGTATCTGATGTGTGGAGAGTACTTGAGCCAATGAGGGCTTCTTGTGGAGGTTCACAATCAGTATGCCTAAGCTTTGGAGACCAGCAAGTGCAACCTCCTCCTTATTTCATATGTCCTATTTTTCAGGAAGTCATGGAGGATCCTCACGTAGCAGCCGACGGGTTTACTTACGAGGCAGAGGCTTTGAGAGGATGGTTAGACAGTGGACACGACACTTCACCGATGACGAACCTAAGGCTTGATCACCAAAACCTCGTCCCTAACCGTGCTCTTCGTTCTGTAATTCAAGAATGGTTGCAACAGCACCAGTAAGTCCATTGATTCAGTTTGGTGTTATGTTTCTGTTTTCATATAGTTAATAATGTTTGCCATTCCAAGAGTAGGGGAAAAGAGAAGGAAAAGATAGAAAGAGAGGTAGATGAAAAGGGAAACAATAGAAGTGTAAAGATGCATATAAGATATAGAAAAAGAAATGAGCTATGTGAATAATGTGTTTCTTTTTTGTTTGTGGTGGGTTCCTAAAGTTTGGAGAATGAATCTGCTATCATCCTTTACTGTTGGGTAGCAGTGATATAGAAAATGATGTGCATTCAATTCCATCCCAGTGTACATGAAAGTGTGAATACGTCTGTTTCTTATATTTGATTTGATTTGATTATTTAACAGACACCAGTCCAAGCAAGTTGTCCATTAGACAAGATGCTATTTTGCAAAATTCCTTTCACCTTCCAATGAGATGAAATCAATTATTTCATGTTGGCTTTATCATTTGATTACTTATATTTATACTTCGAATTTGTGCAAGCCAACTATATCATTTTGGATTGGGTTAGTTTTTAATCTTCATGTCACGTTTCAGTTTTATCTCTTGTATTCTATAAGAGGGTGTTTGGGGCGTTGAATTGAGTTTTAAAGTCTGAAATTAGGAAGTTTGTGTTTGGTATGCATAGTTGTTTAGTCTATAGTTA 2965 39.8 MGAAADKYHSRKMTKIRSRKAMYVHLNAPAFCQIQFVCNGQLIRIREACPQEPHADISLPSPQSQNINGASWRPVQSGQFNGRIIDSPSIGMERLTISDAILNTSGTWSAFEHSYSTSPSSGCMDVASSRTEEDEFELGLDSPRQLTNFAPNSSPPHLLGFQQDGSADDSLYIQLEKAITDAANARREAFREALKRAKAEIELGHAIRRAKVAEALYAEEFRGRKETEEARSKEREELDDVKNQVNEMTKELQIARNKGLKLENQIAESDEMVKELEQKILSAIELLHNYKNDRDELLKQRDEALKELNDIRTRQVEARIQHSAHEFSFSEIAEATRKFDPSLKIVEGTNGSMYKGLLYNTEVSIKMLCSHNLQNPEDEFQREVDVLSKLRHPNIATLIGVCPEACILVYDYFPNGNLEDRLACKDNSSPLSWKTRIRIATELCSALIFIHSNKVCKIIHGDMKPSNVLLDANYVPKLAGFGTCHFLPHDEKSSYNEDLSAGYDAKGNHEFPLTTELDVFSFGMILLSLLTGQSYLRLKEDVQFIINIKKRKLKDVLDPRAGDWPFVQAEQLAQLALRCCNTNSMYRPDLVSDVWRVLEPMRASCGGSQSVCLSFGDQQVQPPPYFICPIFQEVMEDPHVAADGFTYEAEALRGWLDSGHDTSPMTNLRLDHQNLVPNRALRSVIQEWLQQHQ 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 59407101 59414282 + XM_039051168.1 Bhi12g01859 53671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01859 693 SUPERFAMILY RING/U-box 617 692 - -
Bhi12g01859 693 ProSiteProfiles Protein kinase domain profile. 339 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01859 693 ProSiteProfiles U-box domain profile. 621 693 IPR003613 GO:0004842|GO:0016567
Bhi12g01859 693 Coils Coil 224 314 - -
Bhi12g01859 693 Gene3D Transferase(Phosphotransferase) domain 1 414 600 - -
Bhi12g01859 693 PANTHER OS02G0152300 PROTEIN 1 688 - -
Bhi12g01859 693 SMART Ubox_2 625 688 IPR003613 GO:0004842|GO:0016567
Bhi12g01859 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Bhi12g01859 693 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 33 1 688 - -
Bhi12g01859 693 SUPERFAMILY Protein kinase-like (PK-like) 319 595 IPR011009 -
Bhi12g01859 693 Pfam Protein kinase domain 344 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01859 693 Coils Coil 180 200 - -
Bhi12g01859 693 MobiDBLite consensus disorder prediction 57 73 - -
Bhi12g01859 693 Pfam U-box domain 623 693 IPR003613 GO:0004842|GO:0016567
Bhi12g01859 693 CDD RING-Ubox_WDSUB1_like 626 667 - -
Bhi12g01859 693 Gene3D Phosphorylase Kinase; domain 1 309 412 - -
Bhi12g01859 693 SMART serkin_6 339 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01859 693 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 620 693 IPR013083 -
Bhi12g01859 693 MobiDBLite consensus disorder prediction 54 73 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g00350 Bhi12g01859 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01859 Bhi-Chr12:59407101 Bhi01g01292 Bhi-Chr1:26171890 3.97E-135 dispersed
Bhi12g01858 Bhi-Chr12:59406607 Bhi12g01859 Bhi-Chr12:59407101 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88536 PF00069 Pkinase 3.70E-30 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01859 - - csv:101202751 1184.09