Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01876 TAAGAGAATGAATATAAAAAAGTAATTGGGAATAAAAAATCAATGAATGGGAAGCGAAAAAAAGAAAAAAAAGAAAAAAGTTTAATCCATTTGACGAAGCTATGGTCTATGGATCCTAAAGAAAGCAAAAAAGTGCGGAAGACCAGAAACAAACAGAAGCCAAAAAAGGGAGCACAATGAATTGGCATAACCCGAAAATAAATTTCAATCCACATATCCATTTGCAACCAAATTGACGAACGAACCAAAAAAGGGAAAGAAAGGTAGTTTAAAAGGGGGAAAGTGGGGTCCCATAATCCCACACAGCGACAACCCATTTCACCATGGCTTCTCTTCACAGAAAGCAAGCTATTCATGCCTGCTTTCTCTTCCTCTTCCTTTTCTTCTCTCTGCCATCTCTCTCCGTCTCTGTCACTGAAGCCGAAGCTTCGTATCTCACTCGTCGTCAACTCTTGGCTCTCAAAGAACACGATCAACTCCCAGATGACTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAGAGGTTGGAGAAGGCTTATGTAGCCCTTCAGGCTTGGAAATTGGCCATCTATTCCGACCCCCAGAACATTACCGCCAATTGGGTTGGCGCCGATGTCTGTTCTTACAACGGCGTCTTCTGTGCTCCGGCGCTCGATGACCCAAATATCGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTACTTGCCGCCGGAAATTGGCCTTATGACCGATTTGGCTCTCTTCCATATCAACTCCAACAGGTTCTGTGGAATCATTCCTTCCAGCTTCTCCAAGCTCGTTCTCATGTTTGAGTTCGATGTCAGCAACAACCGCTTCGTCGGCCATTTTCCTCTTGTCGTCCTTGAATGGCCCAGTGCTAAGTTCCTTGATCTCAGGTACAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATCTTCTTAAACAACAACAGATTCACCTCCTTGATCCCCGAAACCATCGGAAACTCCACCGTCTCCGTTGTCTCCTTCGCCAACAACGAATTCCACGGCTGCATTCCCAACACCATTGGCCACATGTCCAACCTCAACCAGATCCTCTTCATCGGCAACAAGCTCGGCGGCTGTTTCCCACCTGAGATCGGAAAACTCATCAATCTCACTGTATTCGATGCCAGCGCCAATGGCTTCATCGGACACTTGCCTGAATCCTTATCGAGCCTTCAAAACTTGGAGATTATCGACGTTAGTAACAATGAACTGAGGGGCTCTGTTTCTGGAGGCCTTTGCAAGTTGCCCAAATTGGCTAACTTCACTTTCTCCTTTAATTATTTTGATGGAGAAGATGCGGCGTGTGTTGAATCTAAGGGATCTGAGAAGCACTATGATGATGTTCAAAATTGTTTGGCAAATCGACCGGAGCAAAGAGATGCAAATAAATGTAGCGTTGTCTTGAAGAAATCAGTGGACTGTGGAAACTGTGGTGGGTCGGGTTCTCCCGAGGTGCCGATGACTCCTGAGGATCCATTTGATCAATCTCCATCGCCGAGACATAGGCCTCCACCACCTCCGGTGACCTCTCCACCGGACTCGATCGACACCTCTGTCCCAGAAGTTGGAACTCCACCTTCTCCAAGTGAGACCTCCGTTCCATCATTAGCACCATCCCCCGTTCCGTCCTCACCACCTACAGTTGGAGCACCAGTTCCATCCCTGGCTGAATCTCCCGAACCACCAGTTCACTCACCACCACTCCACGTTCACTCACCGGCTCCACCAGTCCATTCCCCGCCACCACCAGTCCATTCTCCTCCCCCACCAGTTCATTCCCCACCACCCCCTGTCCATTCTCCTCCACCACCGGTTCACTCTCCTCCACCACCTGTCCACTCTCCTCCACCACCTGTCCACTCCCCACCACCCCCTGTCCACTCTCCTCCACCACCGGTCCATTCTCCACCACCACCGGTCCACTCTCCACCACCACCGGTCCACTCTCCACCACCACCGATGCACTCTCCGCCGCCACCAGTCCATTCTCCACCACCTCCAACTGCATCTCCTCCTCCTCCTCCCACCCCGGTCCACTCTCCACCCCCGCCGGTGCACTCTCCGCCGCCACCAGTCCATTCTCCACCACCTCCAACTGCATCTCCTCCTCCTCCCGAGCCATTACATTCCCCACCACGCCCTGTCCATTCTCCTCCACCATCGATTCCCTCCCCACCATTCCCTATCCACTATCCTCCACCACCGATTCACTCCCCCTCACCCCCTGTCCACTCTACTCCACCCCCCCCTCCCGTTCATTCCCCACCTCTACTGGTTCACTCCCTACACCCACCGGTCCACTCCCCACCCCCACCGGTTCATTCTCCACCATCACCTGTTTACTCCCCATCGCCAACAGTCCATTCTCCACCACCTCCAACTGCATCTCCTCCTCCTCCTCCCTGTTCTTCTCCACCACCAACATTCGAGGACGTCATCCTCCCAACAAATATCGGCTCCGAATACGCATCACCGCCTCCACCACTATTTCATGGTTATTGA 2576 51.32 MASLHRKQAIHACFLFLFLFFSLPSLSVSVTEAEASYLTRRQLLALKEHDQLPDDYKYQLDIPDTFPNERLEKAYVALQAWKLAIYSDPQNITANWVGADVCSYNGVFCAPALDDPNIEVVAGIDLNHGDIAGYLPPEIGLMTDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPLVVLEWPSAKFLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFTSLIPETIGNSTVSVVSFANNEFHGCIPNTIGHMSNLNQILFIGNKLGGCFPPEIGKLINLTVFDASANGFIGHLPESLSSLQNLEIIDVSNNELRGSVSGGLCKLPKLANFTFSFNYFDGEDAACVESKGSEKHYDDVQNCLANRPEQRDANKCSVVLKKSVDCGNCGGSGSPEVPMTPEDPFDQSPSPRHRPPPPPVTSPPDSIDTSVPEVGTPPSPSETSVPSLAPSPVPSSPPTVGAPVPSLAESPEPPVHSPPLHVHSPAPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPMHSPPPPVHSPPPPTASPPPPPTPVHSPPPPVHSPPPPVHSPPPPTASPPPPEPLHSPPRPVHSPPPSIPSPPFPIHYPPPPIHSPSPPVHSTPPPPPVHSPPLLVHSLHPPVHSPPPPVHSPPSPVYSPSPTVHSPPPPTASPPPPPCSSPPPTFEDVILPTNIGSEYASPPPPLFHGY 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 60171470 60174586 + XM_039051123.1 Bhi12g01876 53688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01876 750 MobiDBLite consensus disorder prediction 407 430 - -
Bhi12g01876 750 PRINTS Proline rich extensin signature 400 416 - -
Bhi12g01876 750 PRINTS Proline rich extensin signature 420 432 - -
Bhi12g01876 750 PRINTS Proline rich extensin signature 435 456 - -
Bhi12g01876 750 PRINTS Proline rich extensin signature 457 473 - -
Bhi12g01876 750 PRINTS Proline rich extensin signature 475 492 - -
Bhi12g01876 750 PRINTS Proline rich extensin signature 493 518 - -
Bhi12g01876 750 Gene3D Ribonuclease Inhibitor 236 357 IPR032675 -
Bhi12g01876 750 MobiDBLite consensus disorder prediction 396 750 - -
Bhi12g01876 750 Gene3D Ribonuclease Inhibitor 71 235 IPR032675 -
Bhi12g01876 750 MobiDBLite consensus disorder prediction 431 447 - -
Bhi12g01876 750 MobiDBLite consensus disorder prediction 448 466 - -
Bhi12g01876 750 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 504 590 - -
Bhi12g01876 750 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 664 745 - -
Bhi12g01876 750 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 403 - -
Bhi12g01876 750 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 589 666 - -
Bhi12g01876 750 MobiDBLite consensus disorder prediction 472 725 - -
Bhi12g01876 750 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 504 590 - -
Bhi12g01876 750 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 9 403 - -
Bhi12g01876 750 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 589 666 - -
Bhi12g01876 750 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 664 745 - -
Bhi12g01876 750 SUPERFAMILY L domain-like 83 348 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00768 Bhi-Chr1:14563182 Bhi12g01876 Bhi-Chr12:60171470 3.15E-123 dispersed
Bhi09g02023 Bhi-Chr9:56817622 Bhi12g01876 Bhi-Chr12:60171470 6.02E-162 dispersed
Bhi12g01876 Bhi-Chr12:60171470 Bhi05g01086 Bhi-Chr5:39247574 1.01E-63 dispersed
Bhi12g01876 Bhi-Chr12:60171470 Bhi06g02041 Bhi-Chr6:55954992 1.55E-129 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01876 - - bhj:120092879 874.004