Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01898 TGTAGCATGCGAACGCCAAGTAAACAAACCTCAAATTCGATCCTCAACCTTATCGAATTTGAAAGAATATTAATTTGCTCATCACCATCTGTGTCAGACATCCTCTTTGGAAATTTGTTTAATTTCAAAAGCTCACTTCTTTTTGTGAATTGTATCTTGTTATCTCAAGTTAAAGTCCTGTGGAGAAGAAGCTTTAGCCAATGGATTTGACTGTTGAAAGTAAGGCATTTGTATGTTTTGCTCTCTGTTTATAGCGGATAAAGTGGACTGCAGTGGAAGAAAAGCAGAAAACAGTTCAACTATTGGAGGAAAAAGCCAGGTGAGGAGAGAGAAATACCATATAGCGAGAGAGAGAGAGGAAAAAAAATGGGTTTTCATGGGTTAGTTGGTCCTGCACTCTTCTGGATCCACTCTTCATAGAGCAACCCATATTTATTATGAGTAAAATATAGCCATAGAAGACCCCATGAAATCGAATCAATCTGAGAATTTGATCTTCAAGCAGTGAAAGAAAGAGTTTTCGTGTTCAATTTCTGGTTCAGACGGCTCCAATTATTCTGTTATTATCTCTGAGAAAGTTAGATTCTGATGGGTTTTGTAAATTTGGGAATCAATCTTCCGAAGCTGTAGTCTTTTGGTTTCTTTAGCTTTCTTTTGCTTGTGGGTGTTTAAGCCTTGTGGAATGGATCTGAGCCATATGAAGGGATCGACGCCGACGCCGACGCCGACTTCAATTTCTGCTAGAAAAGCCACAGATATGGGTTCCGATCAGTTTCCGGCGGGTCTTCGGGTTCTGGTTGTAGACGATGATCCTACCTGTCTCAGGATCTTGGAAAAGATGCTTCAGAATTGCAGCTATGCCGTGACGAAGTGCAACCGAGCGGAGATTGCTCTATCCATGCTTCGTGAGAACAAAAATGGTTTTGATATTGTCTTAAGCGATGTGCATATGCCTGACATGGATGGATTCAAGCTTCTAGAGCAAGTTGGTCTGGAGATGGATTTGCCTGTTATCATGATGTCAGCTGATGATGGGAAGAATGTTGTGATGAAGGGAGTGATTCATGGTGCTTGTGATTACCTGATCAAACCCGTTCGGATAGAAGCGCTCAGGAACATATGGCAACATGTAGTTCGAAAGAGAAAGACTGAATGGAAGGATTTAGAGCAATCCGGGAGCGTCGATGATGGAGATCGAGAGCAAAATCTGTCTGAAGGTGCAAATTATTCGTCTTCGGCATATGAAGGAAGTTGGAACAGCTCGAAGAGGAGGAGGGATGCAGAAGAAGAGCCCGAGGAGAGGGACGATACATCGACTTTAAAGAAGCCGAGGGTGGTATGGTCAGTTGAGCTCCATCAGCAGTTTGTCGCTGCAGTTAATCAGCTAGGCATTGACAAGGCTGTCCCTAAGAAGATATTGGAGTTGATGAATGTTCCAGGGCTTACTAGAGAAAATGTTGCCAGTCATCTTCAGAAATATCGCTTATATCTTAGAAGGCTTAGTGGAGTATCTCCACATCAAAGTAATTTGAACAATTCTTTTATCAACCCCCAAGACCCACCTTTTGGGCCAATGGCTTCATTCAATGGGATTGATCTTCAGACGCTTTCGGTCACTGGCCAACTCTCGCCACAAAGTCTTGCTGCTCTCCAAGCAACGGGACTTCGTAGGCCTACCGCGAAATCTAGCATATCCATGGCCATTGTTGATCAGAACAACATATTCAGCTTTGAAAATCCAAAATTGAGGTTTGTTGAGGACCAAACACAGCACCTAAGTAACAGTAAACCAGTAAATTTGTTTCATGGGATTCCAACAAAAATGGAGCCAAAGCAGCTTGCCAATATGCAGCATCCTACTGTGCAGTCTCAGGGGAACATAAATATGCAACTCATCAAGAGCGAACATGGGGTAACTCAACTAATGCATTTGTCTCAACAGCAAACTGTGGGACAGACTCTAAGTACCTCTCCTGCTAGCCACTTACCTGGAATTCCATCGACATTAAGGAAACCGATCGTATCAGGTAGCGTTACGAGGGGAAATGGGACTGCTGATAGTAGCCACAGAGCTGGATACAACCTAGTTTCGCCATCATCGGTGATGGTGAACTATCCAATGAGCCAAACCGCGGAACTGTCGAACAATTTTTCTCTTCAGAGTAATTCATCGGTATCGACCTTGACTTGTAAAGGGGTATTTCAAGAAGAGATTAGTTCAGATCTAAAAGTATCGGGTGGACTAATGTCGAGTTATGATGTTTTTAGTGACTTGCACCTGCAGAAATCCCATGACTGGGATGCTCAAAATGTAAGCACGTTGGCCTTTGGTACTTCTCACCATGGGAACTTCATACAGGATAGCTTTGATATCTCACCCTCCACTTTAATTCATCATGGTTTTCCTTCAAGCCAAACGAATGGACAAAATCACAATTTGTCAGTCGTTGGAAAGACTATTTTTTCCTTTTCGGATTCAACTCAACCCGAGAATCCACAAAGTATCGCCCAAAACTCGCTTCTTGATCCCGTGGAGGTCAAATCTCAGAGAATCCCTGATGCAAGCTATGAAACTGACCTCTTATCTGAGGACTTTGGCCAGGATGAACTTCTTGGTGTCTTTCTCAAACAACAGCAACAAGGAGACAACGGATCAGTCGAATTTAGCGGCTACCAAACGGAGAATATTTGCGTTTAGAAAATTTCTTGCTTTAGTTCCCCATTTGGTTGTAGCTTCAAATACACTTTGTTGTAACTTTAAAGGTCAAAGTTCTCCCACATTAGATGAAAGATTAGATGACAGGTAGTTCATCATTCTTGTCAACAAGTCCATTGTGAATAGTATGCTTAGCCAGTTGAACCTCGGAAATGTCAGATTTCAATGCAAGTCTGAAGTTTGCAAGAACTGAAGCAGCAAATCTTCATCAGAATGCTCAAACAAAAGATGCAAATCTTACTCCAAACTTCGGTTGGCGTTCAAAGCCTGAAGCGATTTATTTTAGGATGCGTGTGAAACTGTTTGTTTGTAACGGGCACATCGCTCGATCGTCGATGCAAGGCTCGGCTCGGCTCGGCTCGGCTCCATTGCATCTGGAACCATTTAGGAGATTTCTCATCTCTCTAATTACACTTTAAGAATGGTTTTATTTAAACCCCCATGAAAAATCATCAACTTCAATGTAAATATTCTTGTTTGATTGAGACAAATGTGTGCATAATCTCTCAAGTTTGTTCTTTCTTTCTTTTTCTTGTTCTTGGCAGCTTCTCTTACATTCTCA 3278 42.13 MDLSHMKGSTPTPTPTSISARKATDMGSDQFPAGLRVLVVDDDPTCLRILEKMLQNCSYAVTKCNRAEIALSMLRENKNGFDIVLSDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNIWQHVVRKRKTEWKDLEQSGSVDDGDREQNLSEGANYSSSAYEGSWNSSKRRRDAEEEPEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSPHQSNLNNSFINPQDPPFGPMASFNGIDLQTLSVTGQLSPQSLAALQATGLRRPTAKSSISMAIVDQNNIFSFENPKLRFVEDQTQHLSNSKPVNLFHGIPTKMEPKQLANMQHPTVQSQGNINMQLIKSEHGVTQLMHLSQQQTVGQTLSTSPASHLPGIPSTLRKPIVSGSVTRGNGTADSSHRAGYNLVSPSSVMVNYPMSQTAELSNNFSLQSNSSVSTLTCKGVFQEEISSDLKVSGGLMSSYDVFSDLHLQKSHDWDAQNVSTLAFGTSHHGNFIQDSFDISPSTLIHHGFPSSQTNGQNHNLSVVGKTIFSFSDSTQPENPQSIAQNSLLDPVEVKSQRIPDASYETDLLSEDFGQDELLGVFLKQQQQGDNGSVEFSGYQTENICV 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 60731990 60738054 + XM_039051170.1 Bhi12g01898 53710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01898 671 MobiDBLite consensus disorder prediction 158 175 - -
Bhi12g01898 671 MobiDBLite consensus disorder prediction 158 212 - -
Bhi12g01898 671 MobiDBLite consensus disorder prediction 1 25 - -
Bhi12g01898 671 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 215 268 IPR006447 GO:0003677
Bhi12g01898 671 MobiDBLite consensus disorder prediction 427 446 - -
Bhi12g01898 671 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 643 IPR045279 GO:0009736
Bhi12g01898 671 MobiDBLite consensus disorder prediction 192 212 - -
Bhi12g01898 671 Pfam Myb-like DNA-binding domain 217 267 IPR001005 -
Bhi12g01898 671 Gene3D - 212 274 - -
Bhi12g01898 671 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 214 271 IPR017930 -
Bhi12g01898 671 SMART REC_2 35 147 IPR001789 GO:0000160
Bhi12g01898 671 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 643 - -
Bhi12g01898 671 SUPERFAMILY Homeodomain-like 212 272 IPR009057 -
Bhi12g01898 671 MobiDBLite consensus disorder prediction 1 24 - -
Bhi12g01898 671 CDD REC_typeB_ARR-like 37 151 - -
Bhi12g01898 671 PIRSF RR_ARR_type-B 16 661 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bhi12g01898 671 MobiDBLite consensus disorder prediction 176 191 - -
Bhi12g01898 671 Pfam Response regulator receiver domain 37 145 IPR001789 GO:0000160
Bhi12g01898 671 SUPERFAMILY CheY-like 34 158 IPR011006 -
Bhi12g01898 671 ProSiteProfiles Response regulatory domain profile. 36 151 IPR001789 GO:0000160
Bhi12g01898 671 Gene3D - 35 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01364 Bhi-Chr1:27431064 Bhi12g01898 Bhi-Chr12:60731990 5.25E-40 dispersed
Bhi09g00939 Bhi-Chr9:21161603 Bhi12g01898 Bhi-Chr12:60731990 3.77E-11 dispersed
Bhi09g02983 Bhi-Chr9:77402042 Bhi12g01898 Bhi-Chr12:60731990 7.28E-112 dispersed
Bhi12g01898 Bhi-Chr12:60731990 Bhi08g00576 Bhi-Chr8:19099035 1.01E-23 dispersed
Bhi12g01898 Bhi-Chr12:60731990 Bhi12g01899 Bhi-Chr12:60733399 0 tandem
Bhi04g00589 Bhi-Chr4:14084815 Bhi12g01898 Bhi-Chr12:60731990 1.80E-97 transposed
Bhi01g01057 Bhi-Chr1:19601141 Bhi12g01898 Bhi-Chr12:60731990 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2702 PF00072 Response_reg 3.00E-22 CL0304 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01898 - K14491 csv:101210138 1222.61