Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01901 TTTTTCTACCCTAAAGCGGCTGCTAAACCGTGTCGGTTCAATTCTTCATCATCATCTTCTTCCTCTCTTTCTTCGTGCCACTGATCGCTCTCACTCTGTTCTTCCTCTCTCTCTCTATCTCTGCATGTCGGTTTCATCTTTTTCCTCTTTCAGATTTCGATTATCTCCTTTTTCACTGTTTTTGTAGTTGCTGTTCATCGCATTTTCTGTTCCAGTACTGATTATTATGTGGCTTTGTTAGTCTGATCTTCTGTTCAAGCTTCTCCTTACTTCCTTTTAATTCGAGTTTGAGTTCTTCTTTTCAGTGCATTTCTCCTTTCTTTTCCTTCGATTTTATGACTCCAATTCGTCTCCATCTCTTTCAATCGTCAATATCCACTTTCCGCTTCGAGTTCCGGTGCTTATTTTCTCGTTTCGTCCCAGATCTCTGAGATTTCTACTGATAAATGATGGATCCGATCGAGGAAGGATCGGAGTTCAAGGATGCCGGAAAATCTTCTCCGGCGGAAAGCGAGCAGAATAAGAAGACCTGCGCTGATTGTGGTACGACAAAGACTCCTCTCTGGCGTGGAGGTCCAGCTGGCCCTAAGTCTCTTTGCAATGCGTGTGGGATCAGAAGTAGGAAGAAGAGAAGATCGCTTCTAGGTTTAAACAGAGGAGGGGAAGTGGAGAGGAAAAGCAAAGGAAGTAGTAACAGAAGCAACAATGGCGGTGGAAATCAAACAAAAATTGGGAGAGAAAGCTTGAAATGGAGATCAATGGCGTTTGGTAGAAATGAATTAATGCAAAGGAGACAGTTGGGAGAGGAAGAACAAGCTGCTGTTTTGTTAATGGCTCTTTCCTATGGATCTGTATATGCTTGAAATGCTAATATAATGGAATAGTCTTTTTTTTTTTTTGAGCTTCATGATTTCTTGAGTCCTTAAACCCTTTAACTGTAATGTAGCATTTGAGCATTTGCTTTCTTCAATGGATTGATTCTCTTTTTGTTA 992 41.03 MMDPIEEGSEFKDAGKSSPAESEQNKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRSLLGLNRGGEVERKSKGSSNRSNNGGGNQTKIGRESLKWRSMAFGRNELMQRRQLGEEEQAAVLLMALSYGSVYA 138
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 60754479 60755673 + XM_039019360.1 Bhi12g01901 53713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01901 138 ProSiteProfiles GATA-type zinc finger domain profile. 23 59 IPR000679 GO:0006355|GO:0043565
Bhi12g01901 138 PANTHER OS01G0976800 PROTEIN 1 138 - -
Bhi12g01901 138 MobiDBLite consensus disorder prediction 1 20 - -
Bhi12g01901 138 MobiDBLite consensus disorder prediction 1 100 - -
Bhi12g01901 138 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 25 62 - -
Bhi12g01901 138 Gene3D - 23 94 IPR013088 GO:0006355|GO:0008270
Bhi12g01901 138 MobiDBLite consensus disorder prediction 81 98 - -
Bhi12g01901 138 CDD ZnF_GATA 28 63 IPR000679 GO:0006355|GO:0043565
Bhi12g01901 138 SMART GATA_3 23 73 IPR000679 GO:0006355|GO:0043565
Bhi12g01901 138 MobiDBLite consensus disorder prediction 66 80 - -
Bhi12g01901 138 Pfam GATA zinc finger 29 63 IPR000679 GO:0006355|GO:0043565
Bhi12g01901 138 ProSitePatterns GATA-type zinc finger domain. 29 54 IPR000679 GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g01062 Bhi12g01901 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01896 Bhi-Chr2:51062294 Bhi12g01901 Bhi-Chr12:60754479 1.89E-21 dispersed
Bhi03g01300 Bhi-Chr3:26960464 Bhi12g01901 Bhi-Chr12:60754479 4.14E-14 dispersed
Bhi09g03152 Bhi-Chr9:80858569 Bhi12g01901 Bhi-Chr12:60754479 6.77E-16 dispersed
Bhi12g01901 Bhi-Chr12:60754479 Bhi07g00857 Bhi-Chr7:29344117 1.31E-10 dispersed
Bhi02g02154 Bhi-Chr2:58840678 Bhi12g01901 Bhi-Chr12:60754479 6.90E-25 transposed
Bhi05g00589 Bhi-Chr5:15387810 Bhi12g01901 Bhi-Chr12:60754479 3.83E-07 transposed
Bhi09g00946 Bhi-Chr9:21409913 Bhi12g01901 Bhi-Chr12:60754479 7.45E-23 transposed
Bhi11g00074 Bhi-Chr11:1812731 Bhi12g01901 Bhi-Chr12:60754479 3.24E-07 transposed
Bhi01g01062 Bhi-Chr1:19721471 Bhi12g01901 Bhi-Chr12:60754479 3.19E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2704 PF00320 GATA 4.50E-17 CL0167 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01901 - - csv:101209646 240.35