Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01913 ACCCAGGCTGACGGCAGCCACCGTCCATCGCAAAGTTTCAGTACGGAGAAAAATAGGGAGAGAGAGAGAGACAGAGATAGAACAAAAAAAAGGAGTCAAAAAGAAGATTATAATTCTTGAGCTGCGAATTATTTCCTCCCTCTATTTCGTTACCAAATCAAATTTTGTCCGTAATCAGGTTCGGTTTCAAAAAATTCGATGCATTTTTAGTTAGGTTCAGCTTCTTTTAGGAATCATCGATGTCTCTCCCCATGAAAGCTGACGTTCAAGGAAGCCTTGTTGGCTCGGAGATTCATGGCTTCCATACATTGCAAGATTTGGATGTTAAAAACATCAGGGAGGAAGCAAGTGCAAGATGGCTTCGCCCAAATGAAATACATGCAATACTGTGTAACTACAAGTATTTCACCATCCATGTCAAGCCAGTGAACTTGCCCAAAAGTGGAACCATTGTATTATTTGACCGCAAGATGCTTAGAAATTTTCGCAAAGATGGACATAATTGGAAGAAAAAGAAGGATGGAAAGACAGTAAAAGAAGCTCATGAACACCTAAAAGTTGGTAATGTAGAAAGGATACATGTATACTACGCCCATGGCCTAGATAACCCAACCTTTGTTCGTCGATGTTATTGGCTCCTTGATAAGACTCTCGAACACATTGTCCTCGTTCATTACCGTGAAACACAAGAGAGTTCTCCATCCACATCAATGAATTCAAATTCTGGTTCTGTCTTTAACCCAGCAACTCCTTGGCTTTTACCGGAAGAACTTGACTCCAGGGCTACTCATGTTTGTTCTGTTGGTGAAAATGAATTGTCAGAGCCTAGTGACACTACAACAGTCATGACTCATGAACAGCGGCTTCATGAGATCAACACACTTGAGTGGGATGACCTTCTTGTGAGGGACGAGCCTTTCAAACCTGCCATCCCTAATGGAGACAAACTTTCATGCTTTGACCAACAGTACCAAGTCCCAATAAATGTGACCAACAATTTATTGGGGGAGATGTCTTCATTTAGTAATCCAGTTGTGTCAACTGGGAGGGCCAATGGCAATGTCAGTTTCACAGGAAGTGCCAATCTGTTGTTAGGTGGTCAATCAAATTTGAATGTAGAGAAGAGTGAATCCGTTCCAGTTAATTCTTTGGACAATTTGTTAAATGTGGGATTGCAAAGTCAGGACAGCTTTGGACGATGGATAAATGAAGTTATCGGAGACTCTTCTGATTCAATCATTGATCCTGCTATAGAGCCGTCCATTTCATCTGTTCAAAATTCCTATTGTGGCTCAACATTAGATCACCATCAAACTTCGGCTATGGAGCAAATTTTCAACATAACTGATGTCTCACCTGCTTGGGCCTTTTCAACAGAAAAAACAAAGATTCTAATTATTGGATATTTTCACAATGACTACGTACATCTAGCAAAGTCCAATATATCGGTTGTATGTGGTGATACTAGTGTTAATGTTGATTTTGTTCAACCTGGAGTTTATCGCTGTCTGGTACCACCACATTCACCGGGACTAGTACATTTATATGTGAGCTTAGATGGCCATAAACCTATTAGTCAAGTTCTGAATTTTGAGTATCGTGCACCAAATTTACAAGTACCTGTAGTTGCTTCAGAACAGATCCAAAAGTGGGAGGAGTTTCAAATTCAGATGCGGCTTGCTCATCTGTTGTTCAATACATCCAAGATCCTGAGCATCATGTCAACTAGATTGTCGCCTGCTGCCGTGCACGAGGCCAAGAAACTTGCTGTCAAAACTTCTGACATTTCTGATAGTTGGATTTATTTGTTAAAGTCAATTACAGAAAATAGAACTCCATTTCAACAAGCAAGGGAAGGTGTTCTTGAGATCATATTGAGAAGCAGGTTAAGGGAATGGCTGATAGAAAGAGTTGCTGAAGGCTCAAAGAAAAGCACTGAGTTTGATATAAATGGTCAAGGAGTAATCCATTTGTGTGCCATATTGGGATATACCTGGGCTGTACATCCATTTGTCTGGTCTGGTTTATCAATAAACTTCCGAGATAAATTTGGATGGACAGCTCTTCACTGGGCAGCTTATTATGGAAGGGAGAGGATGGTTGCTGTTCTTTTATCAGTGGGGGCGAAGCCAAACATGGTTACCGATCCCTCATCAAAGAACCCTAGTGGATGTACAGCTGCAGATCTTGCATCTATGAACGGTTATGATGGATTAGCTGCGTATCTTTCTGAAAAGGCTTTGGTATCACACTTTGAAGATATGAGCTTGGCTGGAAATGTTAGTGGCTCGTTGGATACTAGTAGTACTATAACTGATGCCTCTGATTGCATCAATGAGGAGCAGATGTATATGAAAGAAACATTAGCAGCTTACCGAACAGCAGCTGATGCAGCTGCACGCATACAAGCTGCATTTCGTGAGCATTCTTTAAAGCAAAAAACTGAAGCGATTGAATTCTCCACTCCTGAAGATGAAGCACGCGGTATTATTGCAGCCATGAAAATTCAACATGCCTATCGCAATTTTGAGACACGAAAAAAAATGGCAGCTGCTGCTCGTATCCAATACAGATTCCGTACTTGGAAGATCCGCAAAGACTTCCTTAATATGCGTCGTCAAACTATTAGAATTCAAGCTGCATTTAGAGGCTTCCAAGTGCGGAAGCAGTATCACAAGATTGTTTGGTCGGTAGGAGTACTCGAGAAAGCTATACTGCGCTGGCGTCTTAAGAGAAAAGGTTTTCGTGGGCTTCAAGTTGCACCTGCTGAAGAGGTAAAGCAGGAAACTGGCATTGAAGAGGACTTCTACCGTGTATCTCAAAAACAAGCAGAAGAGCGAGTTGAGAGAGCTGTTGTTCGGGTTCAGGCTATGTTTCGATCAAAAAAAGCACAAGAGGAGTATCGTAGGATGAGATTAGCCTATGATGAAGCAGCGTTGGAATATGAAGAACTTTCACATACTGATATGAATTGCATCTCTGAAAGCACCTGTCTGTCCAGAGAAACTGGTAGTGATTAATGGTCTACACTACACTATGAATGGTTAAAACACAAGTTCCCTTAGTTCGGGCTAACATGACGAATGACTGGTACCAATACTTGGTAGTCAAAGCTGGGAGCTTTCGAGGTTGGCTCTTTATCGTGGCAATGAGTTTAGAGACCAATGAACGTTTGAGGTAGGGGAAGAACTATTGCCCTTTGTGTCATAGAAATTGTTTTTGGTAGGAGATGCTTGTAGCCTGTACATGTTGTAATTATATATGATGAATAGTTCAGTCTGATTTGTACTTTTTAGTTTTTACTACCCTAGAACTGTTTCATGGAATTTGGTAAACATTCTATTGTCCACAGAATTAGTAGAATATGTAATTTTTATGATTTTGTTTTACTACAAACTTGATTTGGAGGAA 3411 40.78 MSLPMKADVQGSLVGSEIHGFHTLQDLDVKNIREEASARWLRPNEIHAILCNYKYFTIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDNPTFVRRCYWLLDKTLEHIVLVHYRETQESSPSTSMNSNSGSVFNPATPWLLPEELDSRATHVCSVGENELSEPSDTTTVMTHEQRLHEINTLEWDDLLVRDEPFKPAIPNGDKLSCFDQQYQVPINVTNNLLGEMSSFSNPVVSTGRANGNVSFTGSANLLLGGQSNLNVEKSESVPVNSLDNLLNVGLQSQDSFGRWINEVIGDSSDSIIDPAIEPSISSVQNSYCGSTLDHHQTSAMEQIFNITDVSPAWAFSTEKTKILIIGYFHNDYVHLAKSNISVVCGDTSVNVDFVQPGVYRCLVPPHSPGLVHLYVSLDGHKPISQVLNFEYRAPNLQVPVVASEQIQKWEEFQIQMRLAHLLFNTSKILSIMSTRLSPAAVHEAKKLAVKTSDISDSWIYLLKSITENRTPFQQAREGVLEIILRSRLREWLIERVAEGSKKSTEFDINGQGVIHLCAILGYTWAVHPFVWSGLSINFRDKFGWTALHWAAYYGRERMVAVLLSVGAKPNMVTDPSSKNPSGCTAADLASMNGYDGLAAYLSEKALVSHFEDMSLAGNVSGSLDTSSTITDASDCINEEQMYMKETLAAYRTAADAAARIQAAFREHSLKQKTEAIEFSTPEDEARGIIAAMKIQHAYRNFETRKKMAAAARIQYRFRTWKIRKDFLNMRRQTIRIQAAFRGFQVRKQYHKIVWSVGVLEKAILRWRLKRKGFRGLQVAPAEEVKQETGIEEDFYRVSQKQAEERVERAVVRVQAMFRSKKAQEEYRRMRLAYDEAALEYEELSHTDMNCISESTCLSRETGSD 926
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 61099646 61111359 + XM_039018414.1 Bhi12g01913 53725

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01913 926 Gene3D - 507 667 IPR036770 -
Bhi12g01913 926 CDD IPT 368 454 - -
Bhi12g01913 926 Gene3D - 769 815 - -
Bhi12g01913 926 ProSiteProfiles IQ motif profile. 869 897 IPR000048 GO:0005515
Bhi12g01913 926 Pfam IQ calmodulin-binding motif 793 812 IPR000048 GO:0005515
Bhi12g01913 926 ProSiteProfiles IQ motif profile. 768 795 IPR000048 GO:0005515
Bhi12g01913 926 SUPERFAMILY Ankyrin repeat 566 666 IPR036770 -
Bhi12g01913 926 ProSiteProfiles Ankyrin repeat region circular profile. 604 632 - -
Bhi12g01913 926 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 20 907 - -
Bhi12g01913 926 SUPERFAMILY E set domains 367 454 IPR014756 -
Bhi12g01913 926 SMART CG_1_2 32 150 IPR005559 GO:0003677
Bhi12g01913 926 Pfam Ankyrin repeats (3 copies) 553 633 IPR002110 GO:0005515
Bhi12g01913 926 SMART iq_5 867 889 IPR000048 GO:0005515
Bhi12g01913 926 SMART iq_5 767 789 IPR000048 GO:0005515
Bhi12g01913 926 SMART iq_5 714 736 IPR000048 GO:0005515
Bhi12g01913 926 SMART iq_5 790 812 IPR000048 GO:0005515
Bhi12g01913 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 713 818 IPR027417 -
Bhi12g01913 926 SMART ANK_2a 643 672 IPR002110 GO:0005515
Bhi12g01913 926 SMART ANK_2a 604 633 IPR002110 GO:0005515
Bhi12g01913 926 Gene3D Immunoglobulins 361 457 IPR013783 -
Bhi12g01913 926 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 20 907 - -
Bhi12g01913 926 Pfam CG-1 domain 35 148 IPR005559 GO:0003677
Bhi12g01913 926 Coils Coil 881 901 - -
Bhi12g01913 926 Pfam IPT/TIG domain 368 453 IPR002909 -
Bhi12g01913 926 ProSiteProfiles Ankyrin repeat profile. 604 636 IPR002110 GO:0005515
Bhi12g01913 926 ProSiteProfiles CG-1 DNA-binding domain profile. 29 155 IPR005559 GO:0003677
Bhi12g01913 926 ProSiteProfiles IQ motif profile. 791 815 IPR000048 GO:0005515
Bhi12g01913 926 ProSiteProfiles IQ motif profile. 715 744 IPR000048 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01913 K21596 CAMTA; calmodulin-binding transcription activator - csv:101211298 1602.8
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01913 Bhi-Chr12:61099646 Bhi03g02084 Bhi-Chr3:45140463 3.18E-155 dispersed
Bhi12g01913 Bhi-Chr12:61099646 Bhi12g01914 Bhi-Chr12:61099647 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi05g00866 . 1 1098 CAMTA Transcription Factor Family AT5G64220 52.6 2.2e-271 932.9
Bhi05g00865 . 1 1097 CAMTA Transcription Factor Family AT5G64220 52.6 3.2e-270 929.1
Bhi12g02456 . 6 861 CAMTA Transcription Factor Family AT1G67310 51.2 9.8e-248 854.4
Bhi12g02457 . 6 861 CAMTA Transcription Factor Family AT1G67310 51.2 9.8e-248 854.4
Bhi12g02458 . 6 861 CAMTA Transcription Factor Family AT1G67310 51.2 9.8e-248 854.4
Bhi12g01914 . 34 904 CAMTA Transcription Factor Family AT3G16940 55.6 8.4e-266 914.1
Bhi12g01913 . 34 902 CAMTA Transcription Factor Family AT3G16940 55.8 1.4e-265 913.3
Bhi12g01914 . 11 630 CAMTA Transcription Factor Family AT4G16150 53.6 2.5e-194 676.8
Bhi12g01913 . 11 628 CAMTA Transcription Factor Family AT4G16150 53.6 8.2e-193 671.8
Bhi05g00866 . 1 1098 CAMTA Transcription Factor Family AT5G64220 52.6 2.2e-271 932.9
Bhi05g00865 . 1 1097 CAMTA Transcription Factor Family AT5G64220 52.6 3.2e-270 929.1
Bhi12g02456 . 6 861 CAMTA Transcription Factor Family AT1G67310 51.2 9.8e-248 854.4
Bhi12g02457 . 6 861 CAMTA Transcription Factor Family AT1G67310 51.2 9.8e-248 854.4
Bhi12g02458 . 6 861 CAMTA Transcription Factor Family AT1G67310 51.2 9.8e-248 854.4
Bhi12g01914 . 11 630 CAMTA Transcription Factor Family AT4G16150 53.6 2.5e-194 676.8
Bhi12g01913 . 11 628 CAMTA Transcription Factor Family AT4G16150 53.6 8.2e-193 671.8
Bhi12g01914 . 34 904 CAMTA Transcription Factor Family AT3G16940 55.6 8.4e-266 914.1
Bhi12g01913 . 34 902 CAMTA Transcription Factor Family AT3G16940 55.8 1.4e-265 913.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005047 3 2 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 3 1 41
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2706 PF03859 CG-1 1.80E-45 No_clan Bhi TF