Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01935 GAAATTAATTTAATTTAAAAATGGAAAAAGGCGGAAGTCTGGAGGAAAGCTAAAGTAAGAGGGTGAGAAGGTTCTTGACCCATCAGGAGGAAAAACCCTTTCATTCTCTTTCAATTTCAGTCTCTACCGATTGACTCTGCCCGTCCCACCTGTATTAACAACTGGGTTTGGATTGGATTGGGTTGAATTAAATTGGATTGAAATCTCTCATCTCTGTGCTATTGATTTGATGGTCATTTTTGAAGAGGGAAGAGATTTGAAAGATCAGAGAGGAGCTTCTGAGGAAGATCCAAGAGCTGGAGGAGGGTCAAGCGCATCTCAAGAAAGAGATGTCCAAACTTCTTCTATCTGGAACTGCCGCCGCCGATTCCAACTCCGACCACCAAATCCACCACCACCATCATCACCATCAACGCTCTCAATCCATTTCACCTCAGCGTTCTAGATTTGCTACGGCTCGGAGAAGAGGTGGCGCTTCTGGAGGTTTAGACGCCGCTGCCGCCGCCTGGAAAAGAGGCTCTTCCTCGTTTCGACATTCTTCTCCGCTTCAGAGAGAGAGTAGGACTCGTGGCCCTTTGAATGCAGCCGCCGCCGCCGGAGATGGCGGCGGCGGCGGCCCTGCCGCTGTGAATTTCACCAACAAACAGTATCTGAATATCTTGCAGTCAATGGGACAGCCTGTTTATATTTTTGACATTAATTATCGTATAATTTACTGGAACCGAGCTGCTGAAATTGTATATGGGTATTCTGCGGCGGAGGCTCTTGGCCAGGACGCCATTGAGCTTCTAGTAGATCCTGAGGATTTTGCCATTGCAAACCATGTAATTCTTCGTGTCATGGCGGGTGAGAATTGGACTGGTCACTTACCTGTAAAGAACAAGATGGGGCAAAAATTTATAGTTGTTGCTACTAACACTCCATTCTACGACGATGGTGCATTGGTTGGAATTATCTGTGTATCAAATGATTCGCGGCCATTTCAAGATTTGAAGATTCCTTTATCAGTGGGTTGTAAACAGCAGGATGCAGATTCGAGCATGGTTCGATCACGAATTCCGGTTTCAGCGAAACTTGGTCTCGATCCTCAGCAGCCTCTTCAAGTGGCAATCGCTTCAAAGTTATCGAACTTGGCATCAAAGGTAAGCAACAAAGTCAAGTCCAAAATTCGAACCGAAAACATCTCGGATCGAGAAGGTGGAAGTGGAGATGGTTATCACTCTGATCATGGCTATCCAGATGCAGTTCTTTGTGACCATCGGGAGGACGCAAATTCGAGTGGAGCTAGCACACCTCGAGGAGATTCCACGGCTCATGGTACATTTTCCCGTGTTGAAGAGAAGTTATCTGGCAAACAGGTCAGGGATTCTGGTGATGAGGTTAAAGGAAAACCTACTATCCAGAAGATCTTATCCTTAAAAGCAGAAGAATGGATTGCCAAGAAAGGCTTATCCTGGCCGTGGAAAGGGACCGAGCAGGAAGGAGGATCTGAAACAAGGGCAGCCCATTTTGTTTGGCCCTGGTTACAAATCGATCAAGAAGCTGAACCAGCTAATCATAAGAGTTCCTCTATATCTGGGAAACCAGAAATGCAGCAAAATGACGGTCATCGAGCAGTCAATAACGAGGCGTCGGGATCTTGGTCGTCGTTCAATGTTAACAGCACTAGCAGTGTCAGTAGCTGTGGAAGTACCAGTAGTAGTGCAGTCAACAAGGTTGACACAGACATGGACTGCTTGGATCATGAAATCTTGTGGGAAGACCTTACCATTGGGGAGCAAATAGGGCAAGGTTCTTGTGGAACTGTCTATCATGCACTGTGGTATGGATCAGACGTTGCCGTCAAAGTTTTCTCCAAACAAGAGTATTCAGATGATGTGATTCTCTCCTTCAAACAGGAGGTATCCCTGATGAAAAAGCTTAGACACCCCAATATTCTTCTCTTTATGGGAGTTGTAACTTCACCTCAGCGTCTCTGCATTGTCACAGAATTCCTTCCACGTGGAAGTTTGTTTCGTTTACTACAGAGGAACACTGGCAAATTAGATTGGAGACGCCGTGTTCATATGGCTTTGGACATTGCACGAGGCATGAACTATCTTCACCATTGCAATCCACCTATTATTCACCGAGATTTGAAATCTTCGAACCTCTTAATTGACAAAAACTGGACTGTGAAGGTTGGAGATTTTGGTCTATCTCGACTTAAGCATGAGACTTATCTAACAACTAAGACAGGAAAGGGCACGCCTCAATGGATGGCGCCTGAAGTTCTTCGTAATGAGCCCTCGGATGAGAAGTCCGACATATACAGTTTTGGAGTCATATTGTGGGAACTTGCAACCGAGAAGATCCCTTGGGAAAATCTCAATTCGATGCAGGTAATTGGTGCCGTTGGGTTTATGAACCAACGTCTTGAAATCCCCAAGGATGTGGATCCACAATGGGCTTCTATTATTGAAAGCTGCTGGCACAGTGAACCTTCAAACCGGCCATCATTCCAAGTTCTGATAGAAAAGCTGAGAGAGGTGCAGAGGAAGTATGCTATGCAATTACAGGCAGCTCGTTCTGGTGCAGATAACAACAACAATAATAATATCCCTCAAAAGGAAACATAAAAAACCAACAATTTTTATGGCTCTATTTTTGCATATTCCCCAATTGAAGAAGCCAAAGTTTTGAAGAGGTTGAGCAAATGGTGGCCGTGGGATTGGAGTCTCTCAACATTATTTGATGAACCACAAAGTGGAATGAAGGATTTTCTCCCCCTTTTTTTGGCATTTGAGAGAAAGGACAATGACTTCTCAGAGTGGCGATGTCTCATTTCAACTTGGTGGTAGTGGGTGAGGCCTGCCATTTTTTTTTTTTTTTGCCCTTTTTCTTAAAGTAAAGTGCCATAATAATAAAAGACCCTTTTTTTTTTTTTTTTGGGTGGGGGGTGTCGGTAGTGCTGTTTGATTGGGCATGTTCAGATGTCACCCACTTGGTTTTTCATTTGGTGTAAATGAGGTTTCTGACCACTTGTCAAAAAGTTGTACAAAGATGAATGAAACACCACATTTTTTTTTCCTTTTGAGA 3078 44.31 MSKLLLSGTAAADSNSDHQIHHHHHHHQRSQSISPQRSRFATARRRGGASGGLDAAAAAWKRGSSSFRHSSPLQRESRTRGPLNAAAAAGDGGGGGPAAVNFTNKQYLNILQSMGQPVYIFDINYRIIYWNRAAEIVYGYSAAEALGQDAIELLVDPEDFAIANHVILRVMAGENWTGHLPVKNKMGQKFIVVATNTPFYDDGALVGIICVSNDSRPFQDLKIPLSVGCKQQDADSSMVRSRIPVSAKLGLDPQQPLQVAIASKLSNLASKVSNKVKSKIRTENISDREGGSGDGYHSDHGYPDAVLCDHREDANSSGASTPRGDSTAHGTFSRVEEKLSGKQVRDSGDEVKGKPTIQKILSLKAEEWIAKKGLSWPWKGTEQEGGSETRAAHFVWPWLQIDQEAEPANHKSSSISGKPEMQQNDGHRAVNNEASGSWSSFNVNSTSSVSSCGSTSSSAVNKVDTDMDCLDHEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFKQEVSLMKKLRHPNILLFMGVVTSPQRLCIVTEFLPRGSLFRLLQRNTGKLDWRRRVHMALDIARGMNYLHHCNPPIIHRDLKSSNLLIDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWENLNSMQVIGAVGFMNQRLEIPKDVDPQWASIIESCWHSEPSNRPSFQVLIEKLREVQRKYAMQLQAARSGADNNNNNNIPQKET 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 61603333 61609020 + XM_039018435.1 Bhi12g01935 53747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01935 762 MobiDBLite consensus disorder prediction 314 328 - -
Bhi12g01935 762 MobiDBLite consensus disorder prediction 64 78 - -
Bhi12g01935 762 MobiDBLite consensus disorder prediction 280 353 - -
Bhi12g01935 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Bhi12g01935 762 ProSiteProfiles PAS repeat profile. 103 174 IPR000014 -
Bhi12g01935 762 Pfam PAS fold 106 214 IPR013767 GO:0006355
Bhi12g01935 762 MobiDBLite consensus disorder prediction 1 15 - -
Bhi12g01935 762 Pfam Protein tyrosine and serine/threonine kinase 479 731 IPR001245 GO:0004672|GO:0006468
Bhi12g01935 762 CDD PAS 114 214 IPR000014 -
Bhi12g01935 762 Gene3D Transferase(Phosphotransferase) domain 1 557 762 - -
Bhi12g01935 762 SUPERFAMILY Protein kinase-like (PK-like) 463 729 IPR011009 -
Bhi12g01935 762 MobiDBLite consensus disorder prediction 1 51 - -
Bhi12g01935 762 SMART pas_2 105 172 IPR000014 -
Bhi12g01935 762 Gene3D PAS domain 115 217 - -
Bhi12g01935 762 Gene3D Phosphorylase Kinase; domain 1 472 556 - -
Bhi12g01935 762 MobiDBLite consensus disorder prediction 405 435 - -
Bhi12g01935 762 SUPERFAMILY PYP-like sensor domain (PAS domain) 107 214 IPR035965 -
Bhi12g01935 762 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 18 753 - -
Bhi12g01935 762 MobiDBLite consensus disorder prediction 406 435 - -
Bhi12g01935 762 MobiDBLite consensus disorder prediction 280 295 - -
Bhi12g01935 762 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 18 753 - -
Bhi12g01935 762 TIGRFAM sensory_box: PAS domain S-box protein 105 214 IPR000014 -
Bhi12g01935 762 MobiDBLite consensus disorder prediction 330 353 - -
Bhi12g01935 762 PRINTS Tyrosine kinase catalytic domain signature 553 566 IPR001245 GO:0004672|GO:0006468
Bhi12g01935 762 PRINTS Tyrosine kinase catalytic domain signature 592 610 IPR001245 GO:0004672|GO:0006468
Bhi12g01935 762 PRINTS Tyrosine kinase catalytic domain signature 639 649 IPR001245 GO:0004672|GO:0006468
Bhi12g01935 762 PRINTS Tyrosine kinase catalytic domain signature 658 680 IPR001245 GO:0004672|GO:0006468
Bhi12g01935 762 PRINTS Tyrosine kinase catalytic domain signature 702 724 IPR001245 GO:0004672|GO:0006468
Bhi12g01935 762 ProSiteProfiles Protein kinase domain profile. 479 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01935 762 MobiDBLite consensus disorder prediction 63 95 - -
Bhi12g01935 762 CDD STKc_MAP3K-like 485 731 - -
Bhi12g01935 762 SMART serkin_6 479 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01933 Bhi-Chr12:61603333 Bhi12g01935 Bhi-Chr12:61603333 0 dispersed
Bhi12g01935 Bhi-Chr12:61603333 Bhi02g01985 Bhi-Chr2:53926680 8.79E-118 dispersed
Bhi12g01934 Bhi-Chr12:61603333 Bhi12g01935 Bhi-Chr12:61603333 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88542 PF07714 PK_Tyr_Ser-Thr 3.20E-69 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01935 - - bhj:120067055 1415.21