Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi12g01941 | ATTTTAGTTTTGGTTCATTTACAACTTTCGCACTGCAATTTCTTTTCTTCTTCTTCCTCTCTCTCTCCAACCACTTCCAGAAGAGAACGAACGCCTTAACAACGCGTTCCATTAATTTCCTCTTCAATTTCAACAATCTCTGCCTTTTTCCTCTACCAAACTTCTGATTCAATCTTCGTCCGAGTTCTTTCTGTTTCTGTTGATCCTCAGTTCATTGTACAAGGAATTCCCCTCAAGGCACGCATCTCATCGAGCGCGTTGTGTAAATTTGGAGGAGGGAAATTGGATTAGTGGTTGATGATCTTTGAACCATCGATTTGTTGAGGGGATCGATTTTTTTTGAGATTGGATCGGTGCGTCTTCATGGCGTCATCTGTTCTTTCGAATTCTGATCGTGTTCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAGCCACAGCAACAGAGATAATCATCAAAACCAGAATCATATTAAATGGAAATCTCAAGCTCAGCAAGAAATTTACTCATCCAAGCTTGTACGAGCATTGAATCAAGTGAGACTCAGTCCTTCCAACGAGGCGCCGCCGCGCCGTGGCAGAGCTGTACGCGAGGCTGCCGATAGAGTCCTTGCCGTTGCCGCCAAGGGGAGAACAAGGTGGAGTCGAGCCATATTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGATCAGTATCCACCGTTGGAAACAACCGCTCAAAGAAACCAAGAGTCAGCGTATTACGGTTGAGAGGGAAAGGCTTACCGGCGGTACAAAGGAAAGTAAGGGTTCTTGGTCGGCTTGTTCCCGGTTGCCGGAAAGAACCGTTGCCGGTTATTCTGGAAGAAGCTACTGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTTGCTGAATTGCTCTCGGCCTCAACTTCTGCTGCAGGATCTAGTTCGATCCCTCCAAGCTGATTTCTCGCTTTCCCTCTGATGTTTTCCTTACCATTTTCCTGCTTCTCGTTTCTTTGCTTTGCTTGCCTCTATGCAAGTGAAGTAATTGTCTGTTAAATATGATTTGCTGCTTATTTTCTTCTTCTTCTTTCCTTCCTCATGATATTCTATTTTTTCTTTTCACTCATCTTCTTCCCCCCTCCTCTTGAATAACTTCTTTGGAATCCTATGCCCAAAAAGGAGAAAAAGAGAAAAAAGGAAAAAAGAAATTGGAATCCGTACATAATTTGTGCTGTAATCTTGAGCCTCAGCTTGTTTGTCGTTTTACATTTACCTTTGGTGGATTTATTAACCCTCTTAATAACACTCTTGATTCTGCAGAGTTAATGAGAAGAAGAAGAAGAAAGAGAGTTTTGATGAA | 1375 | 42.91 | MASSVLSNSDRVRESSRKQKKKKSHSNRDNHQNQNHIKWKSQAQQEIYSSKLVRALNQVRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKKQRSVSTVGNNRSKKPRVSVLRLRGKGLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAGSSSIPPS | 203 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 61709904 | 61711480 | + | XM_039019730.1 | Bhi12g01941 | 53753 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi12g01941 | 203 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 15 | 201 | - | - | |
| Bhi12g01941 | 203 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Bhi12g01941 | 203 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 15 | 201 | IPR044660 | GO:0006355 | |
| Bhi12g01941 | 203 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 144 | 191 | IPR036638 | GO:0046983 | |
| Bhi12g01941 | 203 | CDD | bHLH_AtIBH1_like | 130 | 185 | IPR044549 | GO:0006355 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi01g01098 | Bhi-Chr1:20914894 | Bhi12g01941 | Bhi-Chr12:61709904 | 7.27E-78 | dispersed | |
| Bhi06g01312 | Bhi-Chr6:40346411 | Bhi12g01941 | Bhi-Chr12:61709904 | 9.94E-07 | dispersed | |
| Bhi02g02200 | Bhi-Chr2:59666406 | Bhi12g01941 | Bhi-Chr12:61709904 | 3.58E-52 | transposed | |
| Bhi06g01517 | Bhi-Chr6:45232046 | Bhi12g01941 | Bhi-Chr12:61709904 | 6.49E-44 | transposed | |
| Bhi01g01097 | Bhi-Chr1:20914894 | Bhi12g01941 | Bhi-Chr12:61709904 | 7.27E-78 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi12g01941 | - | - | csv:101220618 | 313.538 |