Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01953 TTTTTCATTGGAAGAGGCCGATTTCCAACTCTTTATGCTTGTCGTTGATAATGGGGACGGGGAGATCGCTTTAACCGGCATACGGAATTCTCACGCCGTATTTTCAACGCACAATTTGGAATTCCGATTAATTTCACCCAAACAGCCTCCGATTCTTCAACCCCATTCTGCCGCCGCCGTTGCCGCTGCCGCCGTGGACTTTGGATTAGGGGCCCCCTTCTCCGCCGTCCGCCCCAGCTCTTTCACCATCGCCGCACTCCTCTCCGGCCGCCGTTGCAGAATCCAACTCCTCTTCCGCCGCTTCAACTTCCTCCCTATCAACTCCACAGTTCCTGAAGATCTGGACTCCAATTTCTGCTTTTCATGCTCTTTTTGACTTCTGGTTATTAGGGTTTTCTCACTTCCTTTGGCGTACTTGTGCTGAAATTTGAGGCTATAGCCCTTGAACATTATCCTGCTTGCTTGCTTGCTCTGGACCACATATTGCCATTAGAAATGGTTCAATTGAATACCTCTTAAAATTGAACCTTAAATTCAGTGTTCAATGGCTCGTAAGGGTAATCAACAGAAAACAGGGTCAGAGCGCCATGCATCAAACAGTAAAAAAAAAGGTTCAGACTTGCAGTCCAAGGGGCAGGGAAGAGCACGAGAGATAAAGGTATTTCCTGGAGCGGAACTACCAAATGACAACCAGCATAGTAAATCCTTTGAGGAAGGTGTGGTGAATAGTGACTCTGGAGAGGTTATGAAGGATCTAAAAAAATCTGCAAAGTCCTTGAGAAAAGAAAAACAAGGAATGGAAGGACTTCATGCTTCAGAGGAACCAACATTTCCCCCCGAAGAATCTGGGAACTGCAATGGAAATAATGGGGGCTCCGGTATAGGTGAACAATACAAGGGATCTACAGTTGACAAGGAGCAGGTTCATTTAGATGGTAGTTTCAACTTCTTTTTGAATGGAGAACACATCAGAACTGTGATGGATAATCTGAATTTTTCAGATAATGTTTTGGTGAAAAGTTTCGTGGAATCTATGTCATCAATATTTGAAGCAGCTCATGTGTTTCTGGAGCAACATAGACCTCTGTTTAATTCTATGAAGAACAATTTACTAAAGTCAAGTGACTATGTGGTAAAGAAGATTATGACGGCATATCCTATTCTTCTGAAATGGATGATTCATTTTGGGAACATAATGCTTCTCTTATCAATTGTTTGGTTGGACTGTGCCCTCAGGGGCATCGATTCCTTTATTCGTATGGGGACAACATCCTTCTTTGCAGTTATATGGTTCTCCATTCTTTCAATGATTGCAATGGTTGGAATTCTTAAATTCCTTGTGGTTTTGGTAGTAGCTGCTTCCCTTGGAATTTTTGTTGGGTTTGCTTTTGCTATTTTGGTCATCGCCATCTCTGGAGCAGCTTTCCTTTGGTTTTACGGTAACTTTTGGACAACAATGGTGATTATCTTTCTTGGAGGATTGGCCTTTATATTGAGCCACGAACGAGTTGCACTTTTGATCACCACTTTGTATTCGGTTTATTGTGCTTGGGTATGCACTGGATGGCTTGGTTTGCTTTTGGGCCTGAATTTGTCATTTATTTCAAGTGATGCTCTGATTTATGTCCTAAAGAACAACATAAATGAGCATAGGAGATCAAACAGATATCCTGAACAAACAGCTGGGATGAAAGATCAGCCTGGTTTCTTTCACGATGATCCTATGCAAGCATCATCTTCTGAATTTAGTGGTACAGGTTTTGCTGCTGATCGGTGTCCAGGCACACCCTCAACTAGTGGAGCTGATTCTGAGATATCTTCCGAAGATGAAGTCATTCGTTTGCTGAATTGTTCAGATCACTATGCAGCTTTAGGATTGTCTCGGTATGAGAACATAGATCCTTCCCTACTCAAGAAGGAGTATAGGAAAAAGGCAATGTTGGTCCATCCTGATAAAAATATGGGCAATGAAAAGGCTGCAGAAGCATTTAAGAAACTTCAAAATGCTTATGAGGTTTTACTTGATTCGATAAAGCGAAAAACCTATGATGATGAGCTGAGAAGGGAAGAGCTGCTAAACATTTTCCGCAGGTTTCAGAGTGATTCACAGAAGAGTGGTCCATTTGGATTTTCACGTTCAGCAACAAATAGAGAAGATTCTTTTGGTGAATCAAGACGAATAGCCTGCAAAAAGTGCAACAATTTTCATTTATGGATACACACTAGGAAATTGAAATCTCAAGCAAGATGGTGCCAGGAATGCAAAGATTTTCATCAAGCAAAAGATGGGGATGGGTGGGTGGAACAATCTTCCCAGCCTTTTCTTTTTGGATTGCTGCAAAAGGTTGATGCTCCTTGTGCATATGTATGTGCAGAGAGCCGAATATATGATGCTACCGCATGGTATATTTGTCAGGGAATGAGATGTCCAGCCAACACTCACAGGCCAAGTTTTCATGTAAACACCAGTGTAACCTCTAAGCAAAACACCACTAGAGGATCAAGTTCTAGCCAAAGAGGAGGCCAAATGCCTGCATCAAATATAGAAGAGAACATGACAGAAGAAGAGTTCTTTGAGTGGTTTCAGAATGCTATGCAGACAGGCGCATTCGACAACGTCGGTGGCAGCGCCATGGAGAGCCCACCGACTAAAGCAGGAGTAAATTTTAATAAGAACAGTAGCAATAGTGGCAGTGGTAACAAGAAAAAGAAGAAGGGAAAGAAGCAATGGTGATTATTGAGAGGTTATTTGGTTAAACCTGCTAATAATTTTGAAGTGTTTGGTAGCGAGTGATTATTAAATATACAACAAGGTAAGGTAAGGTAAGGTAAGGTAAGATAGCTCCTATAGGAAAATTTCAATATTGATGGTGTAGAGAAGAAAGTATTGAAGAGGCCCTAAAGGGAAGGATGGCATCAAGAGTTTGTATATAGAGAGCGTAGCGGATAACTGTCATAATGGCCTGATTTACCCCAAAGTTTAGACAGGTTGGAAATATGTATCCAAGAATCCCTAAGGTATTGCACTAACCTTAAATATGAAGAACTATTTGGGAAGATGACCTCAATATGGCTGTTTCCTCCATTGACCCCCATTGCATATTTCGCAACTTTCCCCCTACATGTGAAACGACCTTTTTTGGGGACTAGCCCACTTCCCATTACTCGACGAAAGAAATTGAAATGTTTTTTCTTCTATTGGAATACAGATGAGATAAAAGAAAAAAGGTCATCATTCGAGTAAATAATGCAATAGAGTTTTATTTTCTTTACCA 3275 41.4 MARKGNQQKTGSERHASNSKKKGSDLQSKGQGRAREIKVFPGAELPNDNQHSKSFEEGVVNSDSGEVMKDLKKSAKSLRKEKQGMEGLHASEEPTFPPEESGNCNGNNGGSGIGEQYKGSTVDKEQVHLDGSFNFFLNGEHIRTVMDNLNFSDNVLVKSFVESMSSIFEAAHVFLEQHRPLFNSMKNNLLKSSDYVVKKIMTAYPILLKWMIHFGNIMLLLSIVWLDCALRGIDSFIRMGTTSFFAVIWFSILSMIAMVGILKFLVVLVVAASLGIFVGFAFAILVIAISGAAFLWFYGNFWTTMVIIFLGGLAFILSHERVALLITTLYSVYCAWVCTGWLGLLLGLNLSFISSDALIYVLKNNINEHRRSNRYPEQTAGMKDQPGFFHDDPMQASSSEFSGTGFAADRCPGTPSTSGADSEISSEDEVIRLLNCSDHYAALGLSRYENIDPSLLKKEYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEVLLDSIKRKTYDDELRREELLNIFRRFQSDSQKSGPFGFSRSATNREDSFGESRRIACKKCNNFHLWIHTRKLKSQARWCQECKDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPCAYVCAESRIYDATAWYICQGMRCPANTHRPSFHVNTSVTSKQNTTRGSSSSQRGGQMPASNIEENMTEEEFFEWFQNAMQTGAFDNVGGSAMESPPTKAGVNFNKNSSNSGSGNKKKKKGKKQW 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 61990072 62000430 - XM_039050597.1 Bhi12g01953 53765

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01953 729 MobiDBLite consensus disorder prediction 98 115 - -
Bhi12g01953 729 MobiDBLite consensus disorder prediction 691 729 - -
Bhi12g01953 729 MobiDBLite consensus disorder prediction 66 88 - -
Bhi12g01953 729 PANTHER OS03G0832900 PROTEIN 1 729 - -
Bhi12g01953 729 Coils Coil 68 88 - -
Bhi12g01953 729 ProSitePatterns Nt-dnaJ domain signature. 482 501 IPR018253 -
Bhi12g01953 729 CDD DnaJ 438 494 IPR001623 -
Bhi12g01953 729 MobiDBLite consensus disorder prediction 8 32 - -
Bhi12g01953 729 MobiDBLite consensus disorder prediction 1 115 - -
Bhi12g01953 729 ProSiteProfiles dnaJ domain profile. 438 505 IPR001623 -
Bhi12g01953 729 MobiDBLite consensus disorder prediction 702 716 - -
Bhi12g01953 729 SMART dnaj_3 437 497 IPR001623 -
Bhi12g01953 729 PANTHER OS03G0832900 PROTEIN 1 729 - -
Bhi12g01953 729 Gene3D DnaJ domain 427 520 IPR036869 -
Bhi12g01953 729 PRINTS DnaJ domain signature 460 475 IPR001623 -
Bhi12g01953 729 PRINTS DnaJ domain signature 477 497 IPR001623 -
Bhi12g01953 729 MobiDBLite consensus disorder prediction 638 664 - -
Bhi12g01953 729 Pfam DnaJ domain 438 502 IPR001623 -
Bhi12g01953 729 Pfam Cleavage inducing molecular chaperone 542 640 IPR032843 -
Bhi12g01953 729 SUPERFAMILY Chaperone J-domain 415 501 IPR036869 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01953 K09534 DNAJC14; DnaJ homolog subfamily C member 14 - qsu:112036044 899.812
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03078 Bhi-Chr1:76967250 Bhi12g01953 Bhi-Chr12:61990072 5.58E-109 dispersed
Bhi12g01953 Bhi-Chr12:61990072 Bhi09g02496 Bhi-Chr9:67500948 3.01E-10 dispersed
Bhi12g01953 Bhi-Chr12:61990072 Bhi05g01395 Bhi-Chr5:49063498 6.92E-09 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g34 Blo01g00041 . . Bda08g00322 . . . Bma05g01008 Cmo08g01259 Cmo17g00374 . . . . . . . . . . . . . . Cla06g00411 Cam06g0434 Cec06g0440 Cco06g0439 Clacu06g0420 Cmu06g0420 Cre06g1199 . . . . . Csa06g01853 Chy11g01588 . . . . . Bpe05g00806 . . . Sed04g3077 . . Cma08g01294 Cma17g00385 Car08g01159 Car17g00355 Cpe12g00336 Cpe17g00081 Bhi12g01953 Tan06g2785 Cmetu11g0566 . . . Lcy12g0870 . . . . . . . . . . Cme11g02097
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008621 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 2 1 1 1 1 0 1 1 1 1 35