Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01968 TAAAATTTATCGAATGTATGTATGTATATTAATTAAGATAGTTTTAAAATATTATTTTTAAAAAAATGAAGCTAATCAATAAAATAATATATATAAACCAAAGAAAAATGGAAGGGATGGGTTATAAATAATATTGGGCCGAGGCGGAACCGGGAAAACAAGTCCAGGTGATTCCACGGCTAAGTACACAAAATTTCCATTGAAAGCCCTAAACCTCGCGAGAGAGAAACCTTCCGAGTTCCGATGGCTACCACCAACGACCTCCATGGCTCTGGTTGAGTTTTTCCACATAATATGTCAGATACTGTGAATGAAATGCTTATGGAGTCAACTAAGGAAGGATCTGCTCATATGGGTTCAGAGGGAAAGACTAATGACACAGAAATAAAAGCACGTGTTGATTCCATGTGGGAGCAAATGAATAAAGGGGTGTCTAGAAAAACACTAAAAGGTTTGTCAACCAAACGATCTCCAGCTGTGAATAAAAACTCAAAGAAGCCATCCAATAATTGGATTGCATATCTTGGTATGACGTCAAAGAAGCCTCAAGAAAAAGATATATTATCAGAAGGATCCGAGGTTCTGCAGAACAGTTCTACTGATGATGCTAGGATGCTTGCTGCTACTGCTCTCTCAGCTGTTAGGGATGCTGCAGCTACCATTTCTTGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCTGATTCAAAAGAAGCATATGAGAAAATGAAGGCACCTCCTACTTCAGCTGTTGATGTAGTCTTGGAACAAATCAAGAAGAAACAAAAGCTTAGTGTACTTGACAAGACGAAAAAAGACTGGGGGGAGTTCAAGGAAGAGAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAAAAGAGCTCAAACCAATATCTTGATAAAGTTTCCTTTTTGCAGCGAACTGATTACAGGGAGTTCGAACGAGAGCGGGATGCACGGTTGGCTTTGCAGGCCAGGAGGAGGCCTGATATGCGAGAGGACCCATAATTTAAGCCATTGTCCGAAGCTCTGTGAAGAATGTGCCCTAATTTTTTAGGTTCTGAGAATTTCTTGTGCGGATCATTTTCCTATAAATCGATAAGAAAGAATTCCTGTAGCGCAGTTGTTTTTCATTCTGTTGTGTATAGATAAATCTTCGAGCTTCGGTTATTAAATATTATTCATTTGGTGGGAAGTGTACAATCTTCTTAACCATACTGTTGTCCAAA 1271 39.18 MSDTVNEMLMESTKEGSAHMGSEGKTNDTEIKARVDSMWEQMNKGVSRKTLKGLSTKRSPAVNKNSKKPSNNWIAYLGMTSKKPQEKDILSEGSEVLQNSSTDDARMLAATALSAVRDAAATISCRGKVEITEIRDFAGQNVEIKKFVDADSKEAYEKMKAPPTSAVDVVLEQIKKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRTDYREFERERDARLALQARRRPDMREDP 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 62328750 62332543 + XM_039050971.1 Bhi12g01968 53780

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01968 251 Pfam Bucentaur or craniofacial development 165 238 IPR011421 -
Bhi12g01968 251 MobiDBLite consensus disorder prediction 44 70 - -
Bhi12g01968 251 PANTHER SWR1-COMPLEX PROTEIN 5 10 250 - -
Bhi12g01968 251 MobiDBLite consensus disorder prediction 48 70 - -
Bhi12g01968 251 Coils Coil 197 217 - -
Bhi12g01968 251 PANTHER BUCENTAUR RELATED 10 250 IPR027124 -
Bhi12g01968 251 MobiDBLite consensus disorder prediction 1 29 - -
Bhi12g01968 251 ProSiteProfiles Bucentaur C-terminal (BCNT-C) domain profile. 161 242 IPR011421 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01968 - - - csv:101207966 444.121
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01967 Bhi-Chr12:62328742 Bhi12g01968 Bhi-Chr12:62328750 0 tandem
Bhi12g01968 Bhi-Chr12:62328750 Bhi12g01969 Bhi-Chr12:62328751 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g217 Blo01g00027 . . . . . . Bma05g00989 . . . . . . . . . . . . . . . . Cla06g00404 Cam06g0426 Cec06g0434 Cco06g0433 Clacu06g0412 Cmu06g0412 Cre06g1192 Cone14ag0692 Cone15ag0706 . . . . . . . . . . Bpe05g00796 . . . . . . . . . . Cpe12g00342 . Bhi12g01968 . . . . . Lcy12g0888 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007922 1 3 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 0 1 1 1 2 0 1 36