Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01971 TGGTAGCTGAAGCTGAGATCAAATGCCCAAAATCCGTTCCTCTCATGAAAATCAATTATCATCTTCGCGTAACCGACGATCGCGATCTTCAGATCGATTTGCCGCACCCTTCTTCCTCACCTGTCTTTGCCGAGAAAGAAGAAGAAAAGAAAGCCAAAAGAAGAAAGAAGAAAAAGAAAGGCAGAAGAAAGAGGAAGAAGAAGATGAAGAGGAAGAAGCCGGCGGACTAAATAATAAAATTTAAAATGTTCGATCTGTTCGATGAAGAACGAGAGGAATGAGTCCAAAACGAGATGAACGAGCGAAAATCTACGATGCATGTACGACATCGAGCATTTTGGGGACTAAACGGACATTTTACATATGGCTGACGTCATTAGAAGGCCAAAATTTGAGTGTTTTTGAAAGTTGAGCCAAATTTCAAATGGGCCTCGAAATTTGACCCATCCTTACAAATTTCCCCTTCTTGAACCTACTTAATTTCCTTTATTTTTGTCTCCATTTCTATTTTCATACTTTCCTTTGTCTTGCTTGAATGCGACTCAGCACAATTTGATCTTATTTTTATTTGGGGCCTTCATAAAACATGAGAGAGTGAGGGAGAGCTTTTATTTAGCTAAAATGCTCTGGTCCAATGCGATGAAAGTTTTCCTTTTGCTTCTTTGATAAGAAATGAATTTTGGATCATTTCTGATATTTATAATTTTTCTTTTGATATACATGAGTGTTCAGGCTAGCTTATGCATACCTCGACTAATCTCACGGGACAACTGTCTGACCTTACAACATTTAGATATCAATAAAACCCATAGGATATTAAATCCTAGGTAGGTGGCCAACATGGATTGAATCTAGGACCTCTTAGCCTTTTATCAAGGTCATGCTCCCTTATTTACCACTAGGCCAACTTATGATATTTCTAATATTTATAATTCTTTTGTAAATTTTGTGATGGGTCAAATGTACAGCCTCCCATTGGAGTGCTATTCACAATTCCTTTTGAAGATCCCCTTATTCCTTATCAACTTAGATTGGGGGTCTTCTATTTGATTCTGCCCGATTTTTATTTGTCTTAATTTTTTTTTTTTTCTGTGTATTAAAAGCAAGGCTTTGGTAATTGAAGGGGCTAGGTTTCTGCTCGGGAGAAGGTCTCCTGTGTATTATTGAGCCCTCTCTCCCTCCATTGGTTGGTGTTGTGCTGTAGGTGTGTTAGATTAACTTGGCGAGGAGAAGGGTATAGTAGAGTAGAGCATGGCTGAGAGCTTTAGGTGCATGCTTCATCTTAAATCCTTTAAAGAGGAAAAATCTCCTCACACCTGTTGTGAGCAGACTTTGAACAACCCTGTACAGTTCTAGTAACTATGATAAAACTTCATTCGGTGGGAGAGGCATGTTGAATTGAAAAGTTTCATCCTCGAAGTCGATCCTAACAATGGAATAATAGTTGCAATGTTATATAGGTTGGGAGGGTTTCTTTCACGATTTCTGTTGATTTTATTTTTTCTGCTACAAGTTGGACTTAGGAAAAGCAATTTTGTGGGCTATTACTAATGAGCATGAAGAGATTTTCTACCCTCATGTGGTTTATCTTCAGTTTATCTTTTTCAAATTAATGGTAATAGGGCATTGAGGGATGTCAACCCCTCCATATATGCCCTCATTCTCAATAAAGAAGCCTCTATATTTATGGTCTAATGTATCAGCATCCTGGAATTTAAAGTGTAGAAGACATGTAGGAGACTGAAATTGTTGAATGAGCAAGACTCTCACATGCCCTTTCTAATAACTGAGAGGTCAGTAGGTCATTCTGGGAATGGAACTTAGACAAGATTGGTTTCTCTTCAAAACTCCTCCAGAACCTTTGCATCGATGGGTATTCAAGGCAGTTAGTTGCTCAGATATTGTTGAAGATGTGCATATAAAATCAACTGCCATAGATTTTGTTCCAAACATTCGATCTGGTAGCTATGCAGACATTGGAGCTCGGGATTCTATGGATGATGAACATGTCTGCATTGATGATCTGTCTGCCCACCTCAGATCTGTGTTCAAATGTTCTATGCCTAATGGTTTCTATGCTGTTTTTGATGGTCATGGAGGGCCTCACGCAGCTGCTTTTCTCAAGAGGAATGCCATGAGATTATTCTTTGAAGATGCTGATTGGTTAAAAATGCAGGACATTGATTCTATTTCCCTGAAAGATTTGGAGAACTCTCATCGCAAAGCATTCCAACTGGCAGATCTTGCCTTGGCTGATGAGCAAAGTGTTAGCAGCTCGTGTGGGACAACTGCATTAACGGCGTTGGTTCTTGGGAGGCATTTGCTTGTTGCAAATGCCGGTGACTGCCGAGCAGTCTTATGTAGGAAAGGTATAGCAGTCCCAATGTCTCAAGATCACAGACCTTCTAATTTACTTGAGCTCAAGCGAGTGGAAGGGATGGGTGGGTTCGTAGATGATGGGTATGTTAATGGCTATATTTCAGTGACCAGGACCTTAGGGGATTGGGACCTGAAATTACCAAATGGGTCCTCATCACCTCTCATTGCTGATCCACAAGTGGAGCATGTTATTTTAACAAATGATGACGAGTTCTTGATTCTTGGCTGTGACGGGATTTGGGATGTTATGTCAAGCCAATATGCTGTCAGTCTCGTTCGACGTGGGTTGAGGAAGCACAATGACCCTCATCAAAGTTCTCGAGAATTAGTCCAGGAAGCTTTGCGTCTCAACACATCAGATAATCTTACTGCAATTGTAATCTGCTTTTCTTCTCCGAGCTGCGTTCCTCAGCAGCGAATATGCAAGTCATGTAATCTGACAGAGGAGGCTACAAGTAGATTGAGGAGCTTGTTAGAAGGTAACTGATTATCGCATTTTCAAGCATAATCAATTCTGGTCTGTTTATGATTTTGCTTCAGAAGAAACCCAAAAAAAGAAAAAAGATAAAAAAAAAAGCAGCCAGCAGTTTTGTAGGGATACAGAGAAACTGATTAACATGACTGCGGTCAATTAGATTTTGGAACTAGCCAACCTAATAGGAATTTTGTTCCCTCCGGCATTATTTGTAAAGTGATAATGAGAAGCTTTTTGATCCCCTGGAGGCCTCGGAATTTGGCCTTCTTTTTGTTTATTTTATGTGTTTCTGTCTTTCTTTGGATTTTTAGTTGAACAAAGCATGTAGCACTCTAGAAGGCTGAAATGGCATAAAACAATGGTGCCCATGCATTTTGTTTCTTTTTTGTTAATTTTCTTTCAGATTTAAAAGATTGCGGGATTGAAAGATATAACCATCGATATTTGAGATGGTAATTAGTATCTTATCTATCGAGCTGATTCAACTATTTCTGTTCAA 3353 39.31 MELRQDWFLFKTPPEPLHRWVFKAVSCSDIVEDVHIKSTAIDFVPNIRSGSYADIGARDSMDDEHVCIDDLSAHLRSVFKCSMPNGFYAVFDGHGGPHAAAFLKRNAMRLFFEDADWLKMQDIDSISLKDLENSHRKAFQLADLALADEQSVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRKGIAVPMSQDHRPSNLLELKRVEGMGGFVDDGYVNGYISVTRTLGDWDLKLPNGSSSPLIADPQVEHVILTNDDEFLILGCDGIWDVMSSQYAVSLVRRGLRKHNDPHQSSRELVQEALRLNTSDNLTAIVICFSSPSCVPQQRICKSCNLTEEATSRLRSLLEGN 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 62369543 62375602 - XM_039019529.1 Bhi12g01971 53783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01971 350 CDD PP2Cc 47 318 IPR001932 -
Bhi12g01971 350 Gene3D - 31 322 IPR036457 -
Bhi12g01971 350 PANTHER PROTEIN PHOSPHATASE 2C 22 334 IPR015655 GO:0004722|GO:0006470
Bhi12g01971 350 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Bhi12g01971 350 SUPERFAMILY PP2C-like 37 319 IPR036457 -
Bhi12g01971 350 ProSiteProfiles PPM-type phosphatase domain profile. 48 318 IPR001932 -
Bhi12g01971 350 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 22 334 - -
Bhi12g01971 350 Pfam Protein phosphatase 2C 56 310 IPR001932 -
Bhi12g01971 350 SMART PP2C_4 38 316 IPR001932 -
Bhi12g01971 350 SMART PP2C_SIG_2 63 318 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g02846 Bhi-Chr9:75479118 Bhi12g01971 Bhi-Chr12:62369543 6.12E-97 dispersed
Bhi12g01971 Bhi-Chr12:62369543 Bhi12g01973 Bhi-Chr12:62369543 0 dispersed
Bhi12g01971 Bhi-Chr12:62369543 Bhi12g01972 Bhi-Chr12:62369543 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2708 PF00481 PP2C 2.30E-64 CL0238 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01971 K14803 - csv:101207477 626.706