Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01973 TGGTAGCTGAAGCTGAGATCAAATGCCCAAAATCCGTTCCTCTCATGAAAATCAATTATCATCTTCGCGTAACCGACGATCGCGATCTTCAGATCGATTTGCCGCACCCTTCTTCCTCACCTGTCTTTGCCGAGAAAGAAGAAGAAAAGAAAGCCAAAAGAAGAAAGAAGAAAAAGAAAGGCAGAAGAAAGAGGAAGAAGAAGATGAAGAGGAAGAAGCCGGCGGACTAAATAATAAAATTTAAAATGTTCGATCTGTTCGATGAAGAACGAGAGGAATGAGTCCAAAACGAGATGAACGAGCGAAAATCTACGATGCATGCAGTTAGTTGCTCAGATATTGTTGAAGATGTGCATATAAAATCAACTGCCATAGATTTTGTTCCAAACATTCGATCTGGTAGCTATGCAGACATTGGAGCTCGGGATTCTATGGATGATGAACATGTCTGCATTGATGATCTGTCTGCCCACCTCAGATCTGTGTTCAAATGTTCTATGCCTAATGGTTTCTATGCTGTTTTTGATGGTCATGGAGGGCCTCACGCAGCTGCTTTTCTCAAGAGGAATGCCATGAGATTATTCTTTGAAGATGCTGATTGGTTAAAAATGCAGGACATTGATTCTATTTCCCTGAAAGATTTGGAGAACTCTCATCGCAAAGCATTCCAACTGGCAGATCTTGCCTTGGCTGATGAGCAAAGTGTTAGCAGCTCGTGTGGGACAACTGCATTAACGGCGTTGGTTCTTGGGAGGCATTTGCTTGTTGCAAATGCCGGTGACTGCCGAGCAGTCTTATGTAGGAAAGGTATAGCAGTCCCAATGTCTCAAGATCACAGACCTTCTAATTTACTTGAGCTCAAGCGAGTGGAAGGGATGGGTGGGTTCGTAGATGATGGGTATGTTAATGGCTATATTTCAGTGACCAGGACCTTAGGGGATTGGGACCTGAAATTACCAAATGGGTCCTCATCACCTCTCATTGCTGATCCACAAGTGGAGCATGTTATTTTAACAAATGATGACGAGTTCTTGATTCTTGGCTGTGACGGGATTTGGGATGTTATGTCAAGCCAATATGCTGTCAGTCTCGTTCGACGTGGGTTGAGGAAGCACAATGACCCTCATCAAAGTTCTCGAGAATTAGTCCAGGAAGCTTTGCGTCTCAACACATCAGATAATCTTACTGCAATTGTAATCTGCTTTTCTTCTCCGAGCTGCGTTCCTCAGCAGCGAATATGCAAGTCATGTAATCTGACAGAGGAGGCTACAAGTAGATTGAGGAGCTTGTTAGAAGGTAACTGATTATCGCATTTTCAAGCATAATCAATTCTGGTCTGTTTATGATTTTGCTTCAGAAGAAACCCAAAAAAAGAAAAAAGATAAAAAAAAAAGCAGCCAGCAGTTTTGTAGGGATACAGAGAAACTGATTAACATGACTGCGGTCAATTAGATTTTGGAACTAGCCAACCTAATAGGAATTTTGTTCCCTCCGGCATTATTTGTAAAGTGATAATGAGAAGCTTTTTGATCCCCTGGAGGCCTCGGAATTTGGCCTTCTTTTTGTTTATTTTATGTGTTTCTGTCTTTCTTTGGATTTTTAGTTGAACAAAGCATGTAGCACTCTAGAAGGCTGAAATGGCATAAAACAATGGTGCCCATGCATTTTGTTTCTTTTTTGTTAATTTTCTTTCAGATTTAAAAGATTGCGGGATTGAAAGATATAACCATCGATATTTGAGATGGTAATTAGTATCTTATCTATCGAGCTGATTCAACTATTTCTGTTCAA 1791 40.87 MNERKSTMHAVSCSDIVEDVHIKSTAIDFVPNIRSGSYADIGARDSMDDEHVCIDDLSAHLRSVFKCSMPNGFYAVFDGHGGPHAAAFLKRNAMRLFFEDADWLKMQDIDSISLKDLENSHRKAFQLADLALADEQSVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRKGIAVPMSQDHRPSNLLELKRVEGMGGFVDDGYVNGYISVTRTLGDWDLKLPNGSSSPLIADPQVEHVILTNDDEFLILGCDGIWDVMSSQYAVSLVRRGLRKHNDPHQSSRELVQEALRLNTSDNLTAIVICFSSPSCVPQQRICKSCNLTEEATSRLRSLLEGN 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 62369543 62375602 - XM_039019530.1 Bhi12g01973 53785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01973 336 CDD PP2Cc 33 304 IPR001932 -
Bhi12g01973 336 Gene3D - 17 308 IPR036457 -
Bhi12g01973 336 SUPERFAMILY PP2C-like 23 305 IPR036457 -
Bhi12g01973 336 SMART PP2C_SIG_2 49 304 IPR001932 -
Bhi12g01973 336 SMART PP2C_4 24 302 IPR001932 -
Bhi12g01973 336 Pfam Protein phosphatase 2C 42 296 IPR001932 -
Bhi12g01973 336 PANTHER PROTEIN PHOSPHATASE 2C 9 320 IPR015655 GO:0004722|GO:0006470
Bhi12g01973 336 ProSiteProfiles PPM-type phosphatase domain profile. 34 304 IPR001932 -
Bhi12g01973 336 ProSitePatterns PPM-type phosphatase domain signature. 73 81 IPR000222 GO:0043169
Bhi12g01973 336 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 9 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g01971 Bhi-Chr12:62369543 Bhi12g01973 Bhi-Chr12:62369543 0 dispersed
Bhi12g01973 Bhi-Chr12:62369543 Bhi09g03047 Bhi-Chr9:78889607 8.85E-42 dispersed
Bhi12g01972 Bhi-Chr12:62369543 Bhi12g01973 Bhi-Chr12:62369543 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2710 PF00481 PP2C 2.00E-64 CL0238 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01973 K14803 - csv:101207477 624.78