Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g01998 ATATATTGATCACATAGCACACAACAGAAAAGAAATTATATCAGGAAGAGATCGTCGGCGAGAAGAGAGAAAAATGCGATTGGGAAAGTACGAGCTTGGAAAAACGCTCGGCCATGGCAATTTTGGGAAGGTCAAATTTGCAATTAATTTTGAAACTCAGCAACCTTTTGCTGTCAAAGAAGTTGATAAGACCAAAATTATCCTTCTTAATATCACCCATCAGTTTAAAAGGGAAATACACACCCTCAAACTTCTCAGGCATCCAAATATAGTCAGGCTTCATGAGGTGTTGGCTAGTAAAAGCAAAATTTACATGGTTCTCGAGTACGTGAACGGCGGAGAATTATTTGATACAATCGCGTCTAAGGGAAAGCTATCAGAAGCTCAAGGTAGAAAAATCTTCCAACAGTTAGTTGATGGTGTGAGTTACTGCCATAAGAAAGGCGTTTACCATAGAGATCTCAAGCTGGAGAACATACTTGTTGATGCCAAGGGAAACGTTAAGATAACTGACTTTGGGTTAAGTGCTTTACCCGAACATTTTAGGGGTGATGGTTTGCTTCACACAACCTGTGGAAGCCCAAACTATGTAGCACCAGAGATTCTTGCAAACAGAGGGTATGATGGTGCAGCCTCAGATATATGGTCTTGTGGTGTTATCTTGTTTGTAATTCTCACCGGATCACTTCCTTTCGATGATAGAAATTTGTCTGTTCTTTATCATAAGATTTTGAAAGGAGAAATTTATCTACCCAAGTGGCTGTCACAAGGAGCCAAAAATTTGATAAGAAGGATTCTTGATCCAAACCCTATTTCTAGGATAACTATGGCTTCTATCAAAATGGATGATTGGTTTAGAAAGGACTATCATCCAGCCTACCTTGATGAAGAAGAGGAAGATATATACACTAATGAAGCTGTGGTCTTCCCAATGCATCAAGTGCCATCTTATCTTGGGGAAAAGAGTTCAGAGTCTCCTACTACTACTATAAATGCATTTCAACTGATTGGAATGTCCTCATGCTTAGACCTTTCAGGTTTCTTTGAGAAAGAGGACATTACTGAGAGGAAGATCAGATTTACAACCAACCACTCTACAAAAGAACATATACTCAACAGGATGGAGGATCTTGTAACAGACATGGGCTTTCTTGTCCATAAGAAAGAAGGAAGGTTGAAAGTAATGAGAGAACATCAAGGTGAAAATGGTGTGTCCAGCATACTCTCTATATCAGCAGAGGTTTTTGAGATAAGTCCATCACTATTTGTTGTAGAATTAAGAAAGTTGCATGGAGATTCATCTTCATATAGACAGTTGTGTAAAATATTATCCAGTGATTTGGGTATCCCCTCCAGCCAAGACTCGGTGATGACATAGAAACTCCGGAGATCTTTATATATATATATTTTTATTTTGTGGGATAGGAGAGAAATTGTAATTTTAATTATGAAATTGGTGAGAATATTTATCAATAAAGTTGGCGGGTTTGTGATGTTGAA 1500 38.13 MRLGKYELGKTLGHGNFGKVKFAINFETQQPFAVKEVDKTKIILLNITHQFKREIHTLKLLRHPNIVRLHEVLASKSKIYMVLEYVNGGELFDTIASKGKLSEAQGRKIFQQLVDGVSYCHKKGVYHRDLKLENILVDAKGNVKITDFGLSALPEHFRGDGLLHTTCGSPNYVAPEILANRGYDGAASDIWSCGVILFVILTGSLPFDDRNLSVLYHKILKGEIYLPKWLSQGAKNLIRRILDPNPISRITMASIKMDDWFRKDYHPAYLDEEEEDIYTNEAVVFPMHQVPSYLGEKSSESPTTTINAFQLIGMSSCLDLSGFFEKEDITERKIRFTTNHSTKEHILNRMEDLVTDMGFLVHKKEGRLKVMREHQGENGVSSILSISAEVFEISPSLFVVELRKLHGDSSSYRQLCKILSSDLGIPSSQDSVMT 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 62725796 62733998 - XM_039050699.1 Bhi12g01998 53810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g01998 434 Pfam Haspin like kinase domain 75 153 - -
Bhi12g01998 434 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Bhi12g01998 434 PANTHER SERINE/THREONINE KINASE 3 432 - -
Bhi12g01998 434 SMART serkin_6 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01998 434 CDD CIPK_C 307 423 - -
Bhi12g01998 434 ProSiteProfiles Protein kinase domain profile. 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01998 434 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 3 432 - -
Bhi12g01998 434 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Bhi12g01998 434 Gene3D Transferase(Phosphotransferase) domain 1 86 284 - -
Bhi12g01998 434 Pfam Protein kinase domain 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g01998 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Bhi12g01998 434 SUPERFAMILY Protein kinase-like (PK-like) 3 295 IPR011009 -
Bhi12g01998 434 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Bhi12g01998 434 Gene3D Kinase associated domain 1, KA1 300 425 - -
Bhi12g01998 434 Pfam NAF domain 304 363 IPR004041 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01143 Bhi-Chr1:22186821 Bhi12g01998 Bhi-Chr12:62725796 6.56E-61 dispersed
Bhi01g01144 Bhi-Chr1:22186822 Bhi12g01998 Bhi-Chr12:62725796 0 dispersed
Bhi12g01998 Bhi-Chr12:62725796 Bhi08g02035 Bhi-Chr8:58659804 1.52E-152 dispersed
Bhi12g01998 Bhi-Chr12:62725796 Bhi08g02033 Bhi-Chr8:58659791 3.00E-152 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88547 PF00069 Pkinase 7.30E-72 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g01998 K07198 - csv:101206030 741.11