Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi12g01998 | ATATATTGATCACATAGCACACAACAGAAAAGAAATTATATCAGGAAGAGATCGTCGGCGAGAAGAGAGAAAAATGCGATTGGGAAAGTACGAGCTTGGAAAAACGCTCGGCCATGGCAATTTTGGGAAGGTCAAATTTGCAATTAATTTTGAAACTCAGCAACCTTTTGCTGTCAAAGAAGTTGATAAGACCAAAATTATCCTTCTTAATATCACCCATCAGTTTAAAAGGGAAATACACACCCTCAAACTTCTCAGGCATCCAAATATAGTCAGGCTTCATGAGGTGTTGGCTAGTAAAAGCAAAATTTACATGGTTCTCGAGTACGTGAACGGCGGAGAATTATTTGATACAATCGCGTCTAAGGGAAAGCTATCAGAAGCTCAAGGTAGAAAAATCTTCCAACAGTTAGTTGATGGTGTGAGTTACTGCCATAAGAAAGGCGTTTACCATAGAGATCTCAAGCTGGAGAACATACTTGTTGATGCCAAGGGAAACGTTAAGATAACTGACTTTGGGTTAAGTGCTTTACCCGAACATTTTAGGGGTGATGGTTTGCTTCACACAACCTGTGGAAGCCCAAACTATGTAGCACCAGAGATTCTTGCAAACAGAGGGTATGATGGTGCAGCCTCAGATATATGGTCTTGTGGTGTTATCTTGTTTGTAATTCTCACCGGATCACTTCCTTTCGATGATAGAAATTTGTCTGTTCTTTATCATAAGATTTTGAAAGGAGAAATTTATCTACCCAAGTGGCTGTCACAAGGAGCCAAAAATTTGATAAGAAGGATTCTTGATCCAAACCCTATTTCTAGGATAACTATGGCTTCTATCAAAATGGATGATTGGTTTAGAAAGGACTATCATCCAGCCTACCTTGATGAAGAAGAGGAAGATATATACACTAATGAAGCTGTGGTCTTCCCAATGCATCAAGTGCCATCTTATCTTGGGGAAAAGAGTTCAGAGTCTCCTACTACTACTATAAATGCATTTCAACTGATTGGAATGTCCTCATGCTTAGACCTTTCAGGTTTCTTTGAGAAAGAGGACATTACTGAGAGGAAGATCAGATTTACAACCAACCACTCTACAAAAGAACATATACTCAACAGGATGGAGGATCTTGTAACAGACATGGGCTTTCTTGTCCATAAGAAAGAAGGAAGGTTGAAAGTAATGAGAGAACATCAAGGTGAAAATGGTGTGTCCAGCATACTCTCTATATCAGCAGAGGTTTTTGAGATAAGTCCATCACTATTTGTTGTAGAATTAAGAAAGTTGCATGGAGATTCATCTTCATATAGACAGTTGTGTAAAATATTATCCAGTGATTTGGGTATCCCCTCCAGCCAAGACTCGGTGATGACATAGAAACTCCGGAGATCTTTATATATATATATTTTTATTTTGTGGGATAGGAGAGAAATTGTAATTTTAATTATGAAATTGGTGAGAATATTTATCAATAAAGTTGGCGGGTTTGTGATGTTGAA | 1500 | 38.13 | MRLGKYELGKTLGHGNFGKVKFAINFETQQPFAVKEVDKTKIILLNITHQFKREIHTLKLLRHPNIVRLHEVLASKSKIYMVLEYVNGGELFDTIASKGKLSEAQGRKIFQQLVDGVSYCHKKGVYHRDLKLENILVDAKGNVKITDFGLSALPEHFRGDGLLHTTCGSPNYVAPEILANRGYDGAASDIWSCGVILFVILTGSLPFDDRNLSVLYHKILKGEIYLPKWLSQGAKNLIRRILDPNPISRITMASIKMDDWFRKDYHPAYLDEEEEDIYTNEAVVFPMHQVPSYLGEKSSESPTTTINAFQLIGMSSCLDLSGFFEKEDITERKIRFTTNHSTKEHILNRMEDLVTDMGFLVHKKEGRLKVMREHQGENGVSSILSISAEVFEISPSLFVVELRKLHGDSSSYRQLCKILSSDLGIPSSQDSVMT | 434 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 62725796 | 62733998 | - | XM_039050699.1 | Bhi12g01998 | 53810 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi12g01998 | 434 | Pfam | Haspin like kinase domain | 75 | 153 | - | - | |
Bhi12g01998 | 434 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 85 | - | - | |
Bhi12g01998 | 434 | PANTHER | SERINE/THREONINE KINASE | 3 | 432 | - | - | |
Bhi12g01998 | 434 | SMART | serkin_6 | 6 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bhi12g01998 | 434 | CDD | CIPK_C | 307 | 423 | - | - | |
Bhi12g01998 | 434 | ProSiteProfiles | Protein kinase domain profile. | 6 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bhi12g01998 | 434 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 3 | 432 | - | - | |
Bhi12g01998 | 434 | ProSiteProfiles | NAF domain profile. | 301 | 325 | IPR018451 | GO:0007165 | |
Bhi12g01998 | 434 | Gene3D | Transferase(Phosphotransferase) domain 1 | 86 | 284 | - | - | |
Bhi12g01998 | 434 | Pfam | Protein kinase domain | 6 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bhi12g01998 | 434 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 125 | 137 | IPR008271 | GO:0004672|GO:0006468 | |
Bhi12g01998 | 434 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 295 | IPR011009 | - | |
Bhi12g01998 | 434 | ProSitePatterns | Protein kinases ATP-binding region signature. | 12 | 35 | IPR017441 | GO:0005524 | |
Bhi12g01998 | 434 | Gene3D | Kinase associated domain 1, KA1 | 300 | 425 | - | - | |
Bhi12g01998 | 434 | Pfam | NAF domain | 304 | 363 | IPR004041 | GO:0007165 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi01g01143 | Bhi-Chr1:22186821 | Bhi12g01998 | Bhi-Chr12:62725796 | 6.56E-61 | dispersed | |
Bhi01g01144 | Bhi-Chr1:22186822 | Bhi12g01998 | Bhi-Chr12:62725796 | 0 | dispersed | |
Bhi12g01998 | Bhi-Chr12:62725796 | Bhi08g02035 | Bhi-Chr8:58659804 | 1.52E-152 | dispersed | |
Bhi12g01998 | Bhi-Chr12:62725796 | Bhi08g02033 | Bhi-Chr8:58659791 | 3.00E-152 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88547 | PF00069 | Pkinase | 7.30E-72 | CL0016 | Bhi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi12g01998 | K07198 | - | csv:101206030 | 741.11 |