Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02006 TCTTTAAGCACTCCCAATTTTCACACGTGCTTTGTCTTCATCTTTCTCTCTTGCCCGACTGTAAGAAAGAAAGAAAAGAAAAGAAAAAGAAAGAGAAAAGAAAATCTTGTTTTCTGCAGATTTTTTCGGGAATCTGCAGGACGGTGAAATCCTTCATCAATGGCCGCGGCCGCTTCTCTGGGGAACCCTGCTCTTACCAGAGTCACTTTACTTGGTCGTATAAACAAAGAGCAGTTGTTGACTTCGCGCAGAGCTCAGAAGATGACGCTCTGTCTGTGCGCCATGGATTCCAAATCAGTAGGTGTTGGAGGTGATGTATTTTCTGTCACGTCGTCGGCCAAGTCCGGAGTTGATTATCTTGGACAGAGCACTAAAGGAGATATGAATGTCAAACTCGAACATCTTGAGGCTTTTGGCGTAGATGGTGAAGAAACCTTAGAAGGTCCAATCGAGGAAGTTGCGAGGTTGGAGGCACATGAAGCGGAGGATCTTCTTAGAGATTTAGGAATCCCGAGTCCTTCATCAAGAAATTCACCACATGGTATATTTTGTAGCCGAACATTGAATCTTCGATCAATCAGTGCCATTGGATACGACATGGACTACACTTTGATGCATTATAATGTCATGGCTTGGGAGGGAAGAGCTTATGACTACTGTATGGAAAACTTAAGGAACATGGGTTTCCCCGTCGATGGACTTGCTTTTGACCCAGATTTGGTTATAAGAGGCCTTGTCATAGACAAGGAGAGAGGTAACTTAGTAAAGGCTGATCGTTTTGGTTATATAAAAAGAGCAATGCATGGAACAAAGATGCTGTCTACTCGAGATGTAAGTGAGATTTATGGGAGGGAATTGGTGGATCTGCGTAAGGAGAATCGATGGGAGTTCCTAAATACACTATTTTCTGTATCAGAGGCTGTTGCTTATATGCAGATGGTAGACAGATTGGATGATGGAGCCATAGGAGCAGCACTTGGTCCACTTGATTATAAAGGACTCTACAAGGCTGTTGGGAAAGCACTATTCAGGGCACATGTCGAGGGTCAGCTTAAGAGTGAGATAATGTCTAATCCTGAATTATTTGTCGAGCCTGACCCTGTACTGCCATTGACCCTATTGGATCAAAAAGAGGCTGGAAAAAAGCTTTTGCTTATCACCAACTCGGATTATCATTACACAGATAAAATGATGCAGCATTCTTTTAATAGATTCCTTCCAAATGATATGGGATGGCGAGATCTATTTGATATAGTAATAGTCTCAGCAAGAAAGCCAGAATTTTTCCAGATGTCTCATCCATTGTACGAGGTGGTGACTGGCGAGGGTCTCATGCGCCCATGCTTCAAGGCTGTCGCAGGGGGCTTGTACTCTGGTGGCAGCGCACAAATGGTTGAGAATTCTTTAAACATTCATGGTGATGAGATATTGTATGTAGGTGATCATATTTACACCGATGTAAGCCAATCTAAATTACACTTGCGCTGGAGAACAGCATTAATTCTACGAGAATTGGAAGAAGAGTATAGTGCTTTGATTCATAGTCGTGGACATCGAGCATCTCTCATTGAGCTTATAAATCAAAAGGAAGTCGTTGGGGATCTATTCAATCAACTTCGGCTTGCTTTGCAAAGGCGTACTCAAGGTCGTCCTGCTCAAACCCTTGCAGCGACTAACTTGGATGATGAGGAACTCACTGAAAGCATGCAAAAGCTGCTCATAGTCATGCAAAGATTAGACCAGAAAATTGCTCCAATGCTAGAAGCCGATGGAGATCTATTCAACAAAAGGTGGGGTTTTCTTTCCCGGGCAGGCCTATGGGATAAAAGCCATTTGATGAGACAAATTGAGAAGTATGCAGATATATACACTTCGAGGGTTTCGAACTTCTTACACTACACGCCATTCACGTATTTCCGCTCGCAAGAACAGACATTGGCTCATGACTCGTATTCATTCTACTGTTCGCATGATGAAACCACTATTGACAGATAAGTCCAACCGAAGAAACTGATATAGCGTATGACTATCTCTAAATAAGGTGATGGATATAGTGGAAGGTTCAATAAAAGAAATGCAAATATTGTATTGATTAGTTCAGGTATGTAAGGTGTGTTCGAGTTAGGTTAAGATTCTCTTAAAGGACATCATTTTGCCTGCTGTAGATTTGAATATTCTGGACTAATCTCAATTGTCTAAACTAATTTCAAAATGATAAATAAATAGATGGTCATATCATTTGTGAA 2246 41.67 MAAAASLGNPALTRVTLLGRINKEQLLTSRRAQKMTLCLCAMDSKSVGVGGDVFSVTSSAKSGVDYLGQSTKGDMNVKLEHLEAFGVDGEETLEGPIEEVARLEAHEAEDLLRDLGIPSPSSRNSPHGIFCSRTLNLRSISAIGYDMDYTLMHYNVMAWEGRAYDYCMENLRNMGFPVDGLAFDPDLVIRGLVIDKERGNLVKADRFGYIKRAMHGTKMLSTRDVSEIYGRELVDLRKENRWEFLNTLFSVSEAVAYMQMVDRLDDGAIGAALGPLDYKGLYKAVGKALFRAHVEGQLKSEIMSNPELFVEPDPVLPLTLLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFDIVIVSARKPEFFQMSHPLYEVVTGEGLMRPCFKAVAGGLYSGGSAQMVENSLNIHGDEILYVGDHIYTDVSQSKLHLRWRTALILRELEEEYSALIHSRGHRASLIELINQKEVVGDLFNQLRLALQRRTQGRPAQTLAATNLDDEELTESMQKLLIVMQRLDQKIAPMLEADGDLFNKRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLHYTPFTYFRSQEQTLAHDSYSFYCSHDETTIDR 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 62807753 62817235 - XM_039018553.1 Bhi12g02006 53818

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02006 611 Pfam 5' nucleotidase family 129 597 IPR008380 -
Bhi12g02006 611 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 45 604 IPR008380 -
Bhi12g02006 611 PANTHER HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE 45 604 - -
Bhi12g02006 611 SUPERFAMILY HAD-like 126 598 IPR036412 -
Bhi12g02006 611 CDD HAD_cN-II 130 452 - -
Bhi12g02006 611 Gene3D - 290 479 IPR023214 -
Bhi12g02006 611 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 129 468 IPR008380 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02006 - - - csv:101205329 1181.78
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00835 Bhi-Chr2:17425383 Bhi12g02006 Bhi-Chr12:62807753 1.96E-46 dispersed
Bhi04g00165 Bhi-Chr4:4035998 Bhi12g02006 Bhi-Chr12:62807753 9.45E-68 dispersed
Bhi04g00166 Bhi-Chr4:4035998 Bhi12g02006 Bhi-Chr12:62807753 2.87E-68 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g266 Blo01g00017 . . . . . . Bma05g00981 . . . . . . . . . . . . . . . . Cla06g00386 . Cec06g0417 . . . . . Cone15ag0684 . . . . . . . . . . Bpe05g00790 . . . Sed11g1035 . . . . . . Cpe12g00353 . Bhi12g02006 Tan06g2823 Cmetu03g0819 Lac11g1075 Hepe03g0003 . Lcy12g0924 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012890 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28