Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02031 CAATTGAGTGCCAGTACAAGCAGTTTAAATGGCGCATGTTGAAGAAAGCTTCCCATGTAATTTATCTGCATTTAGCATTAAAAAAACGGGCATTCATTGAGGAAATTCACGAGAAGCAAGAACAGTCTTCATTGGAACATTATATTAAAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGACCAAACCGCGGTGCCCCAAGATGAGGATGGACCAGATGATGAGGCCGATCCTCTGCATCATGATGAAAGTTCTAAAAATCGGGATGTTCCATCCAGTGCAGCCCTGCCAATTATTCGGCCTGCTTTAGGAAGGCAGCACTCTATGTCTGATAGAGCTAAAAATGCAATGCAAGGGTATCTGAATCACTTTTTGAGTAACATGGATATTGTCAACTCACGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAAGTTATCATTTTCACCAGAATACGGCCCAAAGTTGAAAGAGGATTATGTCATGGTGAAGCATCTACCTAAAATTCCAAAGGAAGATGACTCTAGGAAATGTTGTCTATGCCCATGGTTTAGTTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTATTAAAACCCGGGTTTTTGGCCTTGTTGGGAGATCCTTTTGATACCCAACCAATGGATATTATAGTTTTTGATGTGCTACCTACTTCTGATGGCAACGGAGACGGACGAGTATCTTTGGCTAAGGAAATTAAGGAGCCAAATCCGTTAAGACATTCATTTAAGGTGACATGTGGAAATAGGAATATTAGGATAAGAGCGAAGAATGGATCCAAGGTTAAAGATTGGGTTGCTGCAATTAATGATGCTGGACTGAGGCCTCCTGAGGGCTGGTGTCATCCTCACCGTTTTGGTTCTTATGCTCCACCAAGAGGTTTGACTGAAGATGGTAGTAAGGCTCAGTGGTTCATTGATGGCCTAGCAGCTTTTGAAGCTATTGCGTTTTCCATTGAACGTGCAAAATCAGAGATTTTCATTTGTGGTTGGTGGCTTTGCCCAGAATTGTATCTGCGGCGTCCTTTTGTTTCAAATGCTTCATCTAGGCTTGATGCTTTACTTGAAGCAAAAGCTAAGGAAGGCGTTCAGATCTACATTCTTCTCTACAAAGAGGTTGCCCTTGCTTTAAAGATTAACAGTGTTTATAGCAAGAGAAAACTTCTTGGCATCCATGAGAATGTAAGAGTATTGCGTTACCCAGACCACTTCTCCAGTGGCGTGTACTTATGGTCCCATCATGAGAAACTTGTCATTGTTGATTATCATATTTGCTTTATCGGAGGACTGGATTTATGCTTTGGTCGTTATGATACACCCCAACATAAAGTTGGTGATTGCCCTCCTTCAGTATGGCCTGGGAAGGACTACTATAATCCAAGGGAATCTGAGCCAAATTCATGGGAAGATACCATGAGAGATGAGTTGGATCGCAAAAAATATCCTCGCATGCCTTGGCATGATGTCCACTGTGCACTTTGGGGACCACCTTGTCGAGACATAGCCAGGCATTTTGTCCAACGCTGGAATTATGCTAAGAGAAATAAAGCCCCAAATGAGCAGGCAATTCCATTACTTATGCCTCAGCATCATATGGTCATTCCTCATTATTTGTGGAATAGCCGAGAGTTGGAGGTTGAAAAGAAGAGTTTTGAGAATTCAAGAGGAACAACAGTGCAGGATTCATTTTCTCGAGGATCTTCTTTCCACGATATTCCATTGCTTTTGCCTCAAGAGGCTGATGGACAGGATGCCGACAATGAAGGTCTAAAATTGAATGGTCTGGAGCCCATTGTTAATCCCTTTGATCAGCCAAGTAAGGTCAGCAGCGGTCTCCCTTTTTCTCTCAGGAAGATCAAAGTTGAACCCATAGGATCCGATATGCCTATGAAAGGCTTTGTTGATGATCTTGACCATTTGGATTCCCATGGAAAGTTCTCTGGAGATGGGAAAACACATCGTGTCAAAAGTTCAGATTTTGAGTGGTGGGAAATACAAGACAGGGGGCATCATGGTGGCTTCACAGATGAATCTGGACAAGTTGGTCCATGTGCTTCATGTCGCTGCCAGGTCATCAGAAGCGTCAGTCAGTGGTCTGCTGGGACAAGCCAAACTGAAGAAAGTATTCACATTGCATATTGCTCTCTTATTGAGAAAGCAGAACATTTTATCTACATCGAGAATCAATTTTTTATATCAGGCCTCGCGGGAGATGATTCAATACGGAACCGTGTGTTAGAAGCATTATACCGCCGCATAATGAGAGCCTACCGTGAAAAGAAGATTTTTAGGGTCATTATTGTCATACCACTCTTACCTGGATTTCAGGGGGGTCTGGATGACAGTGGTGCAGCATCGGTTAGAGCTATAATGCATTGGCAGTACCGAACTATATGTCGAGGACAAAATTCAATATTGCATAATCTTTATAACGTTCTTGGTTCAAAAGTTCATGATTATATATCATTTTATGGCCTTAGAGCTTATGGTAAACTCTTTGATGTTGGTCCTGTGGCTACAAGCCAGGTATACGTGCATAGTAAAATTATGATTATCGATGATTGTATTGCTTTGATTGGATCGGCTAATATCAATGACAGAAGTTTACTCGGTAGTAGGGACTCCGAGATTGCTATTGTTATTGAAGATAACGAACTCATCAATTCACATATGGGAGGACAACCATGGAAAGCTGGAAAATTTTGCTGGAGTCTACGTCTCTCTCTTTGGTCTGAACATCTCGGTCTTCGTCCCGGACAGATCAATCAAATAGTTGATCCAGTTGCCGATTCAACCTACAAGGATATGTGGATGGCAACTGCCAAGACAAACACAACAATATACCAAGATGTTTTTTCTTGCATACCGAACGACCTCATAAATTCCAGAGCTGGACTGAGACAGAGTGTTGCGATATGGAAAGAGCGACTGGGACACACGACAATAGATTTAGGAATTGCCCCTGAGAAGCTTGAGTTTTATAAGAATGGAGAAATTGAAAGGATTGATCCAATGGAGAGATTAAGTTCAGTGAAGGGGCATCTTGTTTCCTTCCCACTGGAGTTCCTCAGCAAAGAAGATTTAAGACCTGTGTTCAATGAGAGTGAATACTATGCATCTCAAGTTTTTCATTAAATCTTTATATATATAAATATGCCCTGTTTTTTGTTAGGTTAACTTAATTAATTTTATAGTTAAATGTTGCATTATACTATATTTACCATTTTTTTTTTTTTAAAAAAAGAAAAATAAGAGAGAGAAGGTGGGGTGGGTGGAGGCTCATGATATAAGCCTTCAAAAAGGCACCTTAACAAAAGTTAGGATTTTGTAATATTCATTCAATTAATACAATACTCTTGTCCTAATTTGGGCA 3394 40.9 MSDRAKNAMQGYLNHFLSNMDIVNSREVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIPKEDDSRKCCLCPWFSCCNDNWQKVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDGNGDGRVSLAKEIKEPNPLRHSFKVTCGNRNIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSYAPPRGLTEDGSKAQWFIDGLAAFEAIAFSIERAKSEIFICGWWLCPELYLRRPFVSNASSRLDALLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDYHICFIGGLDLCFGRYDTPQHKVGDCPPSVWPGKDYYNPRESEPNSWEDTMRDELDRKKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWNSRELEVEKKSFENSRGTTVQDSFSRGSSFHDIPLLLPQEADGQDADNEGLKLNGLEPIVNPFDQPSKVSSGLPFSLRKIKVEPIGSDMPMKGFVDDLDHLDSHGKFSGDGKTHRVKSSDFEWWEIQDRGHHGGFTDESGQVGPCASCRCQVIRSVSQWSAGTSQTEESIHIAYCSLIEKAEHFIYIENQFFISGLAGDDSIRNRVLEALYRRIMRAYREKKIFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYNVLGSKVHDYISFYGLRAYGKLFDVGPVATSQVYVHSKIMIIDDCIALIGSANINDRSLLGSRDSEIAIVIEDNELINSHMGGQPWKAGKFCWSLRLSLWSEHLGLRPGQINQIVDPVADSTYKDMWMATAKTNTTIYQDVFSCIPNDLINSRAGLRQSVAIWKERLGHTTIDLGIAPEKLEFYKNGEIERIDPMERLSSVKGHLVSFPLEFLSKEDLRPVFNESEYYASQVFH 942
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 63453475 63464357 - XM_039018594.1 Bhi12g02031 53843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02031 942 Gene3D Endonuclease Chain A 563 795 - -
Bhi12g02031 942 PIRSF PLD_euk 1 458 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bhi12g02031 942 PIRSF PLD_euk 444 942 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bhi12g02031 942 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 739 766 IPR001736 GO:0003824
Bhi12g02031 942 Gene3D Endonuclease Chain A 195 441 - -
Bhi12g02031 942 SUPERFAMILY Phospholipase D/nuclease 152 426 - -
Bhi12g02031 942 SUPERFAMILY PH domain-like 79 170 - -
Bhi12g02031 942 SUPERFAMILY Phospholipase D/nuclease 579 785 - -
Bhi12g02031 942 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 307 334 IPR001736 GO:0003824
Bhi12g02031 942 PANTHER PHOSPHOLIPASE 1 939 - -
Bhi12g02031 942 SMART PH_update 46 174 IPR001849 -
Bhi12g02031 942 Pfam Phospholipase D Active site motif 307 334 IPR001736 GO:0003824
Bhi12g02031 942 CDD PLDc_vPLD1_2_yPLD_like_2 599 783 - -
Bhi12g02031 942 PANTHER PHOSPHOLIPASE D 1 939 IPR015679 -
Bhi12g02031 942 CDD PLDc_vPLD1_2_yPLD_like_1 200 345 - -
Bhi12g02031 942 CDD PH_PLD 23 170 - -
Bhi12g02031 942 SMART pld_4 739 766 IPR001736 GO:0003824
Bhi12g02031 942 SMART pld_4 307 334 IPR001736 GO:0003824
Bhi12g02031 942 Pfam PLD-like domain 612 785 IPR025202 -
Bhi12g02031 942 Gene3D - 72 170 IPR011993 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g02031 Bhi-Chr12:63453475 Bhi01g03327 Bhi-Chr1:83793976 1.92E-17 dispersed
Bhi12g02030 Bhi-Chr12:63453475 Bhi12g02031 Bhi-Chr12:63453475 0 tandem
Bhi12g02031 Bhi-Chr12:63453475 Bhi12g02032 Bhi-Chr12:63453475 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02031 K01115 - csv:101211856 1863.58