Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02036 AAATGTCAAACGGATTTGCCAATGCCGAAGGTGATAAAAAGAAGAAGAAGATGGCGATCATTAGTGTGTCTTCTTTAATCCTCGTGGCAATGGTTGTGGCCGTTACCGTCGGCGTCAACAATGCACCCAAAGAGGAGCACGGTGATGGTCACGGTGGCGAAACACATGAGATTTCATCAACAACCAAAGCAATCCAAGCTATTTGCCAACCGACGGATTACAAAGATGTATGCGAGAAGAATCTAATGGCAGAAGCCGGTAACACAACAGACCCTAAAGAGCTCGCAAAAGTCGGCTTAAGGATTGCCACGAGGAATCTAAACGAGGCGATTAGAAATTCCACCACGCTTCAAGAATTAGCCAAAGACCCAAGAACCAACCAAGCCCTTCAAAACTGTCGTGAGCTTTTAGAATACGCCATCGATGATTTGAACGAATCCTTTGAAAGAATCGGCACCTTCCAAATGTCCAAACTCGACGAGTTCGTTGCTGATCTAAAGATTTGGCTCAGTGGGGCTCTCACGTACGAGCAAACTTGTTTAGATGGATTTGAGAACACTACAGGTGATGCTGGTGTGAGAATGCAAGAGTTTTTGAAGTCATCTCAACAAATGACAACCAACGGGCTTGCCATTGTTAACGAATTGTCTGGCATGTTGGGCTCACTTCAAATTCCTGGAATGACTGGACGACGACTTTTGGAGGACGATGCTGATGAAATGCCGTCGTGGGTCAGCGAGGGAAAGAGACGCTTGATGCAAGCGGCAGCGGCGTCGATGAAACCCGATTTGGTGGTGGCTCAAGATGGGAGTGGGAAATACAAGACTATAAATGCAGCTTTGGCCGATGTGCCTTTGAAGAGTAACAAAACGTTTGTGATTTATGTGAAGGCTGGAATTTATAAGGAAATTGTTGTTATTCCTAAGGCTATGACTCATCTTACCATGTACGGTGATGGTCCAACCAAGACTATCGTTACTGGTAGTTTGAACTTTATCGATGGTATTCAAACATTCAAAACTGCCACCTTCGCTGCAATTGGAGCCAATTTCTACGCTAGAGACATGGGATTCGAGAACACAGCTGGAGCAGCAAAGCACCAAGCCGTAGCCCTACGAGTTCAATCCGACAGATCAATCTTCTACAACTGTAAAATTGACGGATACCAAGACACTCTCTACGCACACGCTCACCGTCAGTTCTACAGAGATTGCATAATCAGTGGCACCATCGACTTCGTCTTCGGCAACGCCGCCACCATTTTCCAGAACTGCAAGCTAGTGGTGCGAAAGCCAATGGATAACCAACAATGCATCGTAACTGCTCACGGCCGTCTCAACCGCAAGGAGCCGACGGCATTGATCTTCCAAAGCTGCCATTTCATGGGTGATCCAGCTTACTTGCCATTCAAAAACATCAACAAGGCATACTTGGGCCGCCCTTGGAAGCAATATTCAAGAACCATTATAATCGGGTCTCAGATAGACGATATAATCCAGCCTGAAGGATGGTTGCCATGGATGGGCGATTTTGGGCTGAACACGTTGTTCTACGCCGAGGTACAGAACAAAGGGCCAGGAGCTGATGAAAGCAAGAGAGTGAAGTGGCGAGGAATTAGACATATTACTCCACAACATGCCGCCGATTACACTCCTCGACGATTTATTGATGGCGATGCTTGGATTCCTGCTAAGGGAATTCCGTACTCTTCTGGAATGATGTAATGAAGGCAATCTAATTAAATCCCTTTTTTTTCCTTCTCTTTTTCTTTTTTACGCACATTTTGGCGTTTAATGTAAC 1800 45.78 MSNGFANAEGDKKKKKMAIISVSSLILVAMVVAVTVGVNNAPKEEHGDGHGGETHEISSTTKAIQAICQPTDYKDVCEKNLMAEAGNTTDPKELAKVGLRIATRNLNEAIRNSTTLQELAKDPRTNQALQNCRELLEYAIDDLNESFERIGTFQMSKLDEFVADLKIWLSGALTYEQTCLDGFENTTGDAGVRMQEFLKSSQQMTTNGLAIVNELSGMLGSLQIPGMTGRRLLEDDADEMPSWVSEGKRRLMQAAAASMKPDLVVAQDGSGKYKTINAALADVPLKSNKTFVIYVKAGIYKEIVVIPKAMTHLTMYGDGPTKTIVTGSLNFIDGIQTFKTATFAAIGANFYARDMGFENTAGAAKHQAVALRVQSDRSIFYNCKIDGYQDTLYAHAHRQFYRDCIISGTIDFVFGNAATIFQNCKLVVRKPMDNQQCIVTAHGRLNRKEPTALIFQSCHFMGDPAYLPFKNINKAYLGRPWKQYSRTIIIGSQIDDIIQPEGWLPWMGDFGLNTLFYAEVQNKGPGADESKRVKWRGIRHITPQHAADYTPRRFIDGDAWIPAKGIPYSSGMM 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 63545398 63547272 + XM_039019915.1 Bhi12g02036 53848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02036 573 PANTHER PECTINESTERASE 19 571 - -
Bhi12g02036 573 Pfam Plant invertase/pectin methylesterase inhibitor 63 211 IPR006501 GO:0004857
Bhi12g02036 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 216 IPR035513 -
Bhi12g02036 573 PANTHER PECTINESTERASE 19 571 - -
Bhi12g02036 573 Gene3D - 255 572 IPR012334 -
Bhi12g02036 573 SMART PMEI_2 59 211 IPR006501 GO:0004857
Bhi12g02036 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 216 IPR035513 -
Bhi12g02036 573 TIGRFAM PME_inhib: pectinesterase inhibitor domain 59 215 IPR006501 GO:0004857
Bhi12g02036 573 Pfam Pectinesterase 262 558 IPR000070 GO:0030599|GO:0042545
Bhi12g02036 573 ProSitePatterns Pectinesterase signature 1. 287 306 IPR018040 -
Bhi12g02036 573 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
Bhi12g02036 573 CDD PMEI-like_3 66 217 - -
Bhi12g02036 573 SUPERFAMILY Pectin lyase-like 258 571 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g02062 Bhi-Chr2:56183188 Bhi12g02036 Bhi-Chr12:63545398 0 dispersed
Bhi12g01028 Bhi-Chr12:31276992 Bhi12g02036 Bhi-Chr12:63545398 4.54E-155 dispersed
Bhi12g01029 Bhi-Chr12:31371329 Bhi12g02036 Bhi-Chr12:63545398 1.42E-162 dispersed
Bhi12g02036 Bhi-Chr12:63545398 Bhi09g00262 Bhi-Chr9:5502512 3.95E-136 dispersed
Bhi01g02829 Bhi-Chr1:70226331 Bhi12g02036 Bhi-Chr12:63545398 3.07E-144 transposed
Bhi07g00084 Bhi-Chr7:4486044 Bhi12g02036 Bhi-Chr12:63545398 3.40E-176 transposed
Bhi08g01024 Bhi-Chr8:33487966 Bhi12g02036 Bhi-Chr12:63545398 3.45E-150 transposed
Bhi08g02011 Bhi-Chr8:57960388 Bhi12g02036 Bhi-Chr12:63545398 2.02E-14 transposed
Bhi01g01041 Bhi-Chr1:19209496 Bhi12g02036 Bhi-Chr12:63545398 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02036 K01051 - csv:101221958 1043.49