Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02048 CTTAAAACTCAAAAGAGACCCGACTGTAGACGGCGGCGACCTCACGCGACCCTCCTCCGAGCTTCACACTTCACACTCATGGAGGAAGCCATTTCTCGAATCCTCACAGAGCTCGAAGAACTTCGCCAACCTCCGCCGCCGCTCTCCGATTCAGCTCTCTTCGACCTTCAAACCTTGTTAGACAACTCAATCGGCACCGATGAACAACAACCTGTTGATCGCCTCTACGAGGACCTCTCCGCCAAATCCCTCTCTCCGTCCTTTCTTACCCGCGCCGTCGCCTCCGCCATGGATGAGTCTTCCACTCGCATTTCAATTTTAGCCTCTAGAGTCTATCTCTCCCTTCTTCTGGCCCCAAATGCACCGGTCTTCACGCTGTTCAATCCGATGGATTTTCTCTCATTTCTCAGGTCTATGAGGCGATTCTTGAAGCAGCGACCACAGGCTCAACCCGACCTGGATGATTCTTCTAATAAGGAGCCTAATGCTCCCAAACGGAAGAGGAAAGGCGGTGTTAAGGGTAAGGGTTTGTTGAATTGTGCGCTGAGGCAGAGTTTTAGTGGCGATGGTGAACTCGATGCAAGAGTCTTGTATCCTGTACTTGAGAGGTTAGAGATTTTAATGAGTTTGATTCATTTGGATCGATTTCCGGATAGTTTGAAATCTTTGATTGAAACTGTAATTGATATTCCAGTTTTGGCACTTGAAGTATGCACTAATTTAAGTATCTATAGTAAGTTTACTAATTTATGTTCGCGGATTTTGAGTGCTACATTGCGTTCTGAGCATGGGGATCTATCCAGTACTGCCGTTGAGGTGATTAAGTCTCTGTCACCATTGATTCTTAATCATAAAGATCAGGCGCGAGCGTTTGCGCTAGGGTTTGTGACTATTCAAATAGCAAATGTAGCAAAGGAATCAGATGGTGTTAAGAGTGCTCTGGTGAATCTTCCAAGGTATTTGGTTCAGAAGGCGCCTGAGAAATCTGAGCCTCGTAGTTTAGCAGTTGATTCAATAATGGAGGTTGTTAAAGTGATGGAATTCCCCGATCAAATTGGGTTTGTGGATCATGTAGTGAAGATGACCCGAGGAAAGTCTAATCTTAGGCTGTTAGCGGTTGATCTCATCCCAATGCTGATAACGTCCTTGAGTGATCTAACGGTCATTGATTCAGAAAGCGAACTAAAGGATTCGTGTGGATTTGGGTGCTTGGTGGCATTGGTTCAACGTTGTTCAGATGCTAGTGCTCCGATTCGTGCTCGGGCACTTACCAACTTAGCTCACCTTGTAGTGTTCTTGGCTGAGAATGACAAGAATAAGGCCTTACTGGAGGAAGTGTTGGGGTCTGGTGACAGACATTGCAAAAAGAATGGAGGTGAAATTCATGCGCTTTTGCGAAAAAGGTGTGTGGATGAGAAGGCGGCAGTTAGGAAGGCTGCATTATTTCTGATTACCAAGTGTACAACCCTCCTTGGTGGAGCAATGGATGGAGATATGCTGAAGACGGTGGGAATTGCTTGTTCTGACCCACTTGTTAGCATACGGAAAGCTGCAACGTCGGCTCTCTCAGAGGTCTTTCGAAGATTCCCAGATGAAACTGTCATGGTCGAGTGGCTACACTCTATTCCACGTTTAATTGCTGACAGTGAATCTAGCATTCAAGAAGAGTGTGAACACCTGTTTCAAGAACTAGTACTAGACCGGTTGTGTAGAGTTGGATCTTCAGGTTTACCTAAAGGAGTATTGGATCTTCTTAAAGGGATAAGTCATGCAGAGGTGGTTCCTTGGGTGAAGAAAGTTTGTGCTAATTTGGGGAAAAAGAAAAGATTAAAACGCACAATTGCAGATTCACTTCAGATAATTATAAAGACATCTGAATCCTTATGGCTAAACCAATCTTTGCCTCCAGAGAAGTGGACAGCTCCCCCGGGTGCCTGGTTCCTGCTGTCAGAAGTATCGCCTTATCTTGGGAAAGCCGTTGATTGGGAGTTTCTTTATCATCATTGGAAATTCCTTGATGATCATGGTAGGACTGAATTTCAGAGTCCAGTGGCTCAAGTAGGTTTATTTGGAGAGGAAAACAGCTCAGAGTCAAATTCCGTTGCTTGGGCTCAAGATCGGGTTTTTCTCTTACAAACCATTTCTAATGTTTCTGTTGAGCTGCCTCCAGAACCTGCAGCAGAATTAGCTCATGAACTGCTTAAAAGGGTTGAAGAATTCAACATGCATTCGACGGAGGTGAATGCACATGTAAAAACACTTAAAACATTGTGCAAGCGGAAGGCTGTGCAATCTACTGAAGCCGATGCCCTCATCCTTAAATGGGTAAACCAGCTGCTTTCCAAAGCCTTTCACATATTGGAGAAGTACATATCCAAGCATGCAGAAGCAAACAAAGATGTGAACTTCGTAACTCCACCTCCTAAAAGTGGTAGTCGAATGGGGAAGAAAGCAACTGCCAGGAGCAAGTCCTTGTCCCGAGCAAGCACTGCAACTTACACCATTGGTTCATTGATTCTCATTTGTCCATCGGCTGACATGACTACAATCATACCACTTCTCCACACCATCATCACTTCTGGAAACCGTGATCCCAAATCTAATAAACTACCAATTCAAACTGCATCTCTAAAGGAAACTGCCCCTTCTTTATACGTTCAAGCATGGTTGACAATGGGGAAGATTTGCCTTGCTGACGAGAAACGTGCAAAGAGTTACATTCCTCTATTTGTACAGGAGCTTGGAAATAGTGATTGTGCAGCTCTTCGCAACAACCTTGTTATCACAATGGCAGATTTTTGTGTACGCTATACTGCTCTAGTTGACTGCTACCTTACGAAAATCACAAAATGCCTTCGTGACCCTTGTGAACTTGTCAGAAGACATACATTCATACTTCTATCGAGATTACTACAGAGGGACTACGTGAAATGGAGAGGGGTTTTGTTTCTTCGGTTTCTCTTGTCACTTGTTGATGAATCAGAGAAGATTCGTCAACTAGCTGCTTTCCTTTTTGGGAACATTTTAAAAGTGAAGGCGCCACTTTTGGCTTACAACAGTTTTGTAGAAGCAATTTATGTTTTGAATGACTGTCATGCTCATTCTGGACATAGCGATTCTAATGCTTCGCGAGCGGAAAGTCGACTCTTCTCCATCCGAGGCAATGATGAAAGGTCGAGGTCCAAGAGAATGCACATTTATGTTTCTCTATTGAAACAAATGGCTCCCGAGCATCTTTTGGCAACCTTTGCAAAGTTATGTGCAGAAATTCTTGTTGCAGCATCAGATGGTATGCTCAATATAGATGATACCACTGCACGGTCTGTTTTACAGGATACCTTTGATATTCTTGCTTGTAAAGAGATCCGACTATCGGTAAATCGAGTATCATCATCAGAATCTGGTGATGTAGATGAGGAAGGAGGCGAGAGTGGAGGAGCATCTGCTGCTAGAGGAAAGGTCATCACTCATGCAGTGAGAAAGAGTCTCATTCAAAACACTATACCCATCTTCATTGAGTTAAAAAGGCTAATGGAAAGCAAGAATAGCCCCCTTATAGGTTCCCTCATGGAATGTCTTCGAGTTCTTCTCAAAGACTACAAGAATGAAATCGATGACTTATTGGTGGCCGATAAGCAACTTCAAAAAGAGCTCCTCTATGACATTCAAAAGTACGAATCTACCAAAGCCAAGTCAGCTGCTGCCGAGGCAGTCAACGAGATGCAAAAGTCAACTAACTTTCTTTCTCCTGAGGCTCCTTCTCGAGCTAGAAGCACTATTAACAAGATAACCTCAAAACTTCAAAATGATTCGAAAGTTGCTTCAGCCATTGCTGATGCAGCTGCTGCAGCCACAGCAAAATCTGTGCTCAGGGAAGTGAATAGAGGGGCTTCGACACCGCCTTTCGGTTCTCTAAGTTTGCCTATACTCAAGTCTTGTACCGGTGGAAACAATGGCACAAATTCCTCACATTTGAATGTGATAGAATCTTTGAGAAAACGCCAATCTTTTGAGTCTGATGAAGAAAACTAATGTACATGGGCTAACTAGGTAACAAGATTGAAAATTAGTGGACTTTTTTATGTTGTAATCTTGGTCTATTTTATTTTGTATTTAATTTCATTTTGATGTAAAATGTAATATTATTAAATGGTTATAACTTAGAGGTATGAGAGATTGTATAGAGAACTATTGGCAAATGGTATCCTTATTTGTGGTGGAGAATGTTCGATTT 4234 43.17 MEEAISRILTELEELRQPPPPLSDSALFDLQTLLDNSIGTDEQQPVDRLYEDLSAKSLSPSFLTRAVASAMDESSTRISILASRVYLSLLLAPNAPVFTLFNPMDFLSFLRSMRRFLKQRPQAQPDLDDSSNKEPNAPKRKRKGGVKGKGLLNCALRQSFSGDGELDARVLYPVLERLEILMSLIHLDRFPDSLKSLIETVIDIPVLALEVCTNLSIYSKFTNLCSRILSATLRSEHGDLSSTAVEVIKSLSPLILNHKDQARAFALGFVTIQIANVAKESDGVKSALVNLPRYLVQKAPEKSEPRSLAVDSIMEVVKVMEFPDQIGFVDHVVKMTRGKSNLRLLAVDLIPMLITSLSDLTVIDSESELKDSCGFGCLVALVQRCSDASAPIRARALTNLAHLVVFLAENDKNKALLEEVLGSGDRHCKKNGGEIHALLRKRCVDEKAAVRKAALFLITKCTTLLGGAMDGDMLKTVGIACSDPLVSIRKAATSALSEVFRRFPDETVMVEWLHSIPRLIADSESSIQEECEHLFQELVLDRLCRVGSSGLPKGVLDLLKGISHAEVVPWVKKVCANLGKKKRLKRTIADSLQIIIKTSESLWLNQSLPPEKWTAPPGAWFLLSEVSPYLGKAVDWEFLYHHWKFLDDHGRTEFQSPVAQVGLFGEENSSESNSVAWAQDRVFLLQTISNVSVELPPEPAAELAHELLKRVEEFNMHSTEVNAHVKTLKTLCKRKAVQSTEADALILKWVNQLLSKAFHILEKYISKHAEANKDVNFVTPPPKSGSRMGKKATARSKSLSRASTATYTIGSLILICPSADMTTIIPLLHTIITSGNRDPKSNKLPIQTASLKETAPSLYVQAWLTMGKICLADEKRAKSYIPLFVQELGNSDCAALRNNLVITMADFCVRYTALVDCYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLAAFLFGNILKVKAPLLAYNSFVEAIYVLNDCHAHSGHSDSNASRAESRLFSIRGNDERSRSKRMHIYVSLLKQMAPEHLLATFAKLCAEILVAASDGMLNIDDTTARSVLQDTFDILACKEIRLSVNRVSSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTKAKSAAAEAVNEMQKSTNFLSPEAPSRARSTINKITSKLQNDSKVASAIADAAAAATAKSVLREVNRGASTPPFGSLSLPILKSCTGGNNGTNSSHLNVIESLRKRQSFESDEEN 1317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 63817185 63830896 + XM_039018662.1 Bhi12g02048 53860

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02048 1317 PANTHER CONDENSIN-2 COMPLEX SUBUNIT D3 2 1305 - -
Bhi12g02048 1317 MobiDBLite consensus disorder prediction 120 146 - -
Bhi12g02048 1317 Coils Coil 1164 1191 - -
Bhi12g02048 1317 PANTHER CONDENSIN 2 1305 IPR026971 GO:0007076
Bhi12g02048 1317 Pfam non-SMC mitotic condensation complex subunit 1 896 1073 IPR032682 -
Bhi12g02048 1317 MobiDBLite consensus disorder prediction 776 795 - -
Bhi12g02048 1317 SUPERFAMILY ARM repeat 328 1180 IPR016024 -
Bhi12g02048 1317 Gene3D - 840 1017 IPR011989 -
Bhi12g02048 1317 Gene3D - 294 542 IPR011989 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02048 K11491 NCAPD3; condensin-2 complex subunit D3 - csv:116405799 1944.86
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02838 Bhi-Chr11:76299825 Bhi12g02048 Bhi-Chr12:63817185 7.82E-07 dispersed
Bhi11g02839 Bhi-Chr11:76300359 Bhi12g02048 Bhi-Chr12:63817185 7.82E-07 dispersed
Bhi12g02047 Bhi-Chr12:63817184 Bhi12g02048 Bhi-Chr12:63817185 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g291 . Blo12g00017 . . Bpe04g01135 . . . . Cmo17g00320 . . . . . . . . . . . . . . Cla06g00475 . . Cco06g0513 . Cmu06g0495 . . . Cone7ag0144 . . . Chy11g01515 . . . . . . . . . Sed12g1134 . . . Cma17g00330 . Car17g00304 . . Bhi12g02048 Tan06g2683 Cmetu04g0061 Lac11g0844 Hepe03g0098 . Lcy12g0737 . . . . . . . Lsi09g01434 . . Cme11g02016
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010431 2 2 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 1 2 1 2 1 1 31