Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g02060 TCAAACCTCATTTCTCAAGCTTCTTTCCCCGCTGGTTATGGCGGGTACGTACGGCTCCACCGTCTCTTTCTCCATTCCTTGCAATAAATTCACTATTTGCAGAGCCAAGCCACTGCTTTCAGTTTCATCTTCCATTTCCATTTCATCTCGTTCCAAGCTCCCAAGAAGAAAAAATCACTTGCGCATCAAAATTCTCAAAACCCTAACTAAACCTCCTCCCTTCACTGTCTCTCCCATTCCTCCTGAAAGCGAATCTTCAACTCCGATCGTATTGCCGGAAATATCAGGTCCTTCAGGCGTCGAGACTGAGGTTTTATCTCCGGCGGAATCTTGCCCTTCCTCCACAGCCACAGACGGCGAATCTCGACTCTCCGAGAGCTCGGACACTGCCTCGTTGCTTAATTTTGACGTTGCCAAATTTTCGTGGGGAAGTTTTGTCAGGTTTGGCGTTTACTTACTTGCTGTTTTTGCGTTTCAGACAATCTGTACTGTTTGGGTTTTAGAATATGGTAGTTCGATCAAGGAAGATAAGAATTCAGATGAAGGTTTGAGTGTTAGGAGAAAAAGCGGAAGAGAACTGTTGTTGAATGGAAATGAGAGAATTATCCTTGGGAATTTCGGGTCTAAAACGAACAAGTTGGTTTATTTGGAGGAAACGAAAATGAGGGAGAAAATTGAAGAGATCAGATTGATGGCTAAGGCAGCAAGGATAGAGGAGAAAAATAAAATATCTGATGATATTGGGGAAGACGACATGGAGGGTGGAAATGTAATTTCTAGGGCTAGGATTGGTATCGAGAAAGAGGTTGATGCTCGACTTGTTAAGTTAGAGAAGAGGCTAAATTCTGCCAAAGAAAAGATACCGGATTCACCGGTAAATTATTTGCTCAAGTCTGAAAATGTTGAAGATGCGGTTGAAAGGAAGGGTTTCAATGGTGAAGAGAGGAATAAGAGTCTAATGTTTAAGAAAAAGTTGAAATACAGAAATTCTTCTAGTGATAGAATGAAGAAACCTATGGGGTTTCAAGGTTTTGTATCTAATGGGAAAAAGGGTGGCTCAAATGGCAAGGGTACAACAGTGGAAGGTGCAAATTTTGTTGGTGGTAACATGGGAATGAAGGATACCAATAAACGGGTAGATAACAAAATCAAGGATAGTGGGGTAGATAATGAAATCAAGGATAGTGTGTCAGAGATGTTCGAAGATGATGACACAAATTTCGCAAGCAATGGATCAGTATTACCACGGGAAAACGATAGAACGAATTTGGATATTGGAACTAAGGTTTCAAGTTCAAAGAATAAACCAAGTAATGGTGTCGTTCAGGAGACTTCTTCAGTTGAGATATCGAAGTCACAGAATTTAGAAGATGTAATGGAGAAAAGATCTCCTTCGGTGAGTTCAGATGACAGTGTTAGAATGAAATCTATGGCTGGTGAAGATAGAGGCAAACAAACAAACAAGAAGGCTGATTTATGGTGGTTGAATCTTCCTTATGTTCTAGTTATTTTTATGAATCGAGGTTCCAATGATGAAGAACTAGAAGGACTTTTCACCTTAAAGATTCCTTCCAAGACACAGGACATTGAGGAATCTACTTATACAGTTGCTTTTGAAGACCATGTTGATGCAAATAACTTCTGTTATCTTCTGGAATCTTTTTTTGAAGAGCTCGACAATTTCACAACTGATGTTGTTCCTCTGCCAACAAAAGAACTTGAGAAGGTCATAAAATCACGTACTAGTAAAATGATTGTTGTGAAGAAGAAGCAACTGCAGCTCTATGCTGGTCAACCATTTGACGATGTCGAGACGGCTTTGCGTGCTTTGGTTGAACGAAATGAGAATGTTATTTCTTTACATTTCAGATAGGAACCAGATGTACAGAGAAACATTCAGTTTCATGCTCGATCCGTTGCGAATGCAGCCATCAAACTTGCCCAAGATGGTGAAAATTTGTCACCGGAGATGGGAGCGTAGCCCACCGAGAAAATTCGCAAGTCCTTTTGTTGATCTACGAGGCCTTTCCCCCCTTTTTTACTTAGTTCAGAGAGTCAAATTTAGATTTGAATTTCACTTCCACCCCACTTGGTTTTGTCTTACTATTTTTTTTTCCTTTGCCAAACAATGACATCCGAGTGTGTTGATAATTACGAGCTTCATGATTCGAATCTCCCAGTCCTTTATTGTTACTAAAAAATTTTTTTTTTTT 2213 40.04 MAGTYGSTVSFSIPCNKFTICRAKPLLSVSSSISISSRSKLPRRKNHLRIKILKTLTKPPPFTVSPIPPESESSTPIVLPEISGPSGVETEVLSPAESCPSSTATDGESRLSESSDTASLLNFDVAKFSWGSFVRFGVYLLAVFAFQTICTVWVLEYGSSIKEDKNSDEGLSVRRKSGRELLLNGNERIILGNFGSKTNKLVYLEETKMREKIEEIRLMAKAARIEEKNKISDDIGEDDMEGGNVISRARIGIEKEVDARLVKLEKRLNSAKEKIPDSPVNYLLKSENVEDAVERKGFNGEERNKSLMFKKKLKYRNSSSDRMKKPMGFQGFVSNGKKGGSNGKGTTVEGANFVGGNMGMKDTNKRVDNKIKDSGVDNEIKDSVSEMFEDDDTNFASNGSVLPRENDRTNLDIGTKVSSSKNKPSNGVVQETSSVEISKSQNLEDVMEKRSPSVSSDDSVRMKSMAGEDRGKQTNKKADLWWLNLPYVLVIFMNRGSNDEELEGLFTLKIPSKTQDIEESTYTVAFEDHVDANNFCYLLESFFEELDNFTTDVVPLPTKELEKVIKSRTSKMIVVKKKQLQLYAGQPFDDVETALRALVERNENVISLHFR 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 63975896 63980546 - XM_039019937.1 Bhi12g02060 53872

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g02060 611 Coils Coil 254 274 - -
Bhi12g02060 611 MobiDBLite consensus disorder prediction 390 405 - -
Bhi12g02060 611 PANTHER EMBRYO DEFECTIVE 1703-RELATED 1 602 - -
Bhi12g02060 611 MobiDBLite consensus disorder prediction 61 80 - -
Bhi12g02060 611 MobiDBLite consensus disorder prediction 390 471 - -
Bhi12g02060 611 MobiDBLite consensus disorder prediction 316 345 - -
Bhi12g02060 611 MobiDBLite consensus disorder prediction 412 441 - -
Bhi12g02060 611 PANTHER ABC SUBFAMILY C PROTEIN 1 602 - -
Bhi12g02060 611 MobiDBLite consensus disorder prediction 442 471 - -
Bhi12g02060 611 Pfam Protein of unknown function (DUF3110) 499 580 IPR021503 -
Bhi12g02060 611 MobiDBLite consensus disorder prediction 86 111 - -
Bhi12g02060 611 MobiDBLite consensus disorder prediction 95 111 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g02060 - - - bhj:120068224 1152.12
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00485 Bhi-Chr1:8655719 Bhi12g02060 Bhi-Chr12:63975896 2.76E-12 dispersed
Bhi01g00486 Bhi-Chr1:8656424 Bhi12g02060 Bhi-Chr12:63975896 3.56E-08 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g304 . Blo12g00018 . . Bpe04g01134 . . . . Cmo17g00313 . . . . . . . . . . . . . . Cla06g00479 Cam06g0514 Cec06g0515 Cco06g0518 Clacu06g0498 Cmu06g0500 Cre06g1271 . . . . . . Chy11g01508 . . . . . . . . . Sed04g1796 . . . . . Car17g00298 Cpe12g00276 . Bhi12g02060 Tan06g2675 Cmetu11g2440 Lac11g0838 Hepe03g0103 . Lcy12g0730 . . . . . . . Lsi09g01429 . . Cme11g02010
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010430 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 1 2 1 1 1 1 1 1 1 0 1 1 4 1 31